; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015474 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015474
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr12:13798651..13803067
RNA-Seq ExpressionLag0015474
SyntenyLag0015474
Gene Ontology termsNA
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]2.3e-3254.2Show/hide
Query:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ
        IRGF SCIR VLV+DGAHL+GKY G +L A+ VD NN IYPI FGI D +++ SWS+F   ++  IG++  L+ VS+RH +I K +R VFP A H ICM 
Subjt:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ

Query:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKF
        HL  NL+ KFK ++I  +F L AKAF+   F
Subjt:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKF

XP_038882416.1 protein FAR1-RELATED SEQUENCE 8-like [Benincasa hispida]1.5e-3658.21Show/hide
Query:  NASIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDI
        NASIRGF +CIR +L+V G HLRGKY+GK+LLATGVD NN IYP+ FGI+ G+T+ESW +F + +   IGQ+ ++VIVS+RHP+I+K I TVFP AFH I
Subjt:  NASIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDI

Query:  CMQHLEENLRKKFKKENIVPIFKLIAKAFRDCKF
        C+ HL+ NL   FK ++I+ IF   AKA R+  F
Subjt:  CMQHLEENLRKKFKKENIVPIFKLIAKAFRDCKF

XP_038884809.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Benincasa hispida]1.0e-3251.91Show/hide
Query:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ
        IRGF +CIR V+VVDG H   KY G +L+ T +D NN+IYPI F I D + D SW++F  H++ +IG + NLVI+SNRH +I K I  +FP+AFH +C+ 
Subjt:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ

Query:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKF
        H+  NL  KFK E+I+P F L AKA+R  +F
Subjt:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKF

XP_038885923.1 uncharacterized protein LOC120076231 [Benincasa hispida]7.8e-3355.64Show/hide
Query:  ASIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDIC
        A+IRGF +CIR VL+VD  HLR KY+GK+LLAT VD NN IY + F I+ G+TDESW +F + +   IGQ+ +LVIVS+RHP+I+K I TVFP AF+ IC
Subjt:  ASIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDIC

Query:  MQHLEENLRKKFKKENIVPIFKLIAKAFRDCKF
        + HL+ NL   FK ++I  IF   AKA R+  F
Subjt:  MQHLEENLRKKFKKENIVPIFKLIAKAFRDCKF

XP_038887218.1 uncharacterized protein LOC120077407 [Benincasa hispida]2.3e-3251.52Show/hide
Query:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ
        IRGF +CIR V+VVDG HL  KY G +L+AT +D NN+IYPI F I D + D SW+ F  H++ +IG + NLVI+S+RH +I K +  +FP+AFH +C+ 
Subjt:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ

Query:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKFN
         +  NL  KFK +NI+P F L+AKA+R  KF+
Subjt:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKFN

TrEMBL top hitse value%identityAlignment
A0A6J1CQH9 protein FAR1-RELATED SEQUENCE 4-like8.7e-3051.11Show/hide
Query:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM
        SIRGF +CIR VLVVDGAHL+GK+ G +L+A+G D NN IYP+ F I DG+T  SW +F   ++  +G + NLV VS+RH  I K I  VFP AFH  C+
Subjt:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM

Query:  QHLEENLRKKFK--KENIVPIFKLIAKAFRDCKFN
        QH++ NL  KFK   + +  +F   AKA+R+  FN
Subjt:  QHLEENLRKKFK--KENIVPIFKLIAKAFRDCKFN

A0A6J1D1Z5 protein FAR-RED ELONGATED HYPOCOTYL 3-like2.1e-3151.52Show/hide
Query:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM
        SIRGF SCIR +LVVDGAHL+GKY G +L A+ +D NN IYP+ FG+ D + D+SW++F   ++  IG +  LV VS+RH +I   + TVFPNA H  CM
Subjt:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM

Query:  QHLEENLRKKFKKENIVPIFKLIAKAFRDCKF
         HL   L +KF+ E +  IF   AKAF+  KF
Subjt:  QHLEENLRKKFKKENIVPIFKLIAKAFRDCKF

A0A6J1D278 uncharacterized protein LOC1110166232.7e-3150.76Show/hide
Query:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM
        SIRGFRSCIR VLV+DGAHL+GKY G +L+A+ VD NN IYP+ FGI D ++D SW++F   ++  IG++  LV VS+RH  I   +  VFPNA H  CM
Subjt:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM

Query:  QHLEENLRKKFKKENIVPIFKLIAKAFRDCKF
         H++ NL  KFK E +  ++   A+AF+   F
Subjt:  QHLEENLRKKFKKENIVPIFKLIAKAFRDCKF

A0A6J1DJT1 uncharacterized protein LOC1110207153.9e-3052.59Show/hide
Query:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM
        SIRGF +CIR VLVVDGAHL+GK+ G +L+A+G D+NN IYP+ F I DG+T  SW +F   ++ T G + NLV VSNRH  I K I  VFP AFH  C+
Subjt:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICM

Query:  QHLEENLRKKFK--KENIVPIFKLIAKAFRDCKFN
        QH++ NL  KFK   + +  +F   AKA+R+  FN
Subjt:  QHLEENLRKKFK--KENIVPIFKLIAKAFRDCKFN

A0A6J1DL12 uncharacterized protein LOC1110220776.4e-3354.96Show/hide
Query:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ
        IRGF SCIR VLV+DGAHL+GKY G +L A+ VD NN IYPI FGI D ++D SWS+F   ++  IG++  L+ VS+RH +I K +R VFP A H ICM 
Subjt:  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQ

Query:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKF
        HL  NL+ KFK ++I  +F L AKAF+   F
Subjt:  HLEENLRKKFKKENIVPIFKLIAKAFRDCKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase3.1e-1130.56Show/hide
Query:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAF
        SI+GF+ C R ++VVD  +L GKY  K+++A+  D+ N  +P+ F +    + +SW +F   +   + Q   + ++S+  P+I       G +   P A+
Subjt:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAF

Query:  HDICMQHL
        H  C+ HL
Subjt:  HDICMQHL

AT1G64255.1 MuDR family transposase3.4e-1028.45Show/hide
Query:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAF
        SI GF+ C R ++VVD  +L  +Y  K+++A+GVD+ N  +P+ F +    + + W +F   +   + Q   L ++S+ HP+I       G +   P A+
Subjt:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAF

Query:  HDICMQHLEENLRKKF
        H   + H      + F
Subjt:  HDICMQHLEENLRKKF

AT1G64260.1 MuDR family transposase4.7e-1231.4Show/hide
Query:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAF
        SI GF+ C R ++VVD   L GKY  K+++A+GVD+ N  +P+ F +    + +SW +FF  +   + Q  +L ++S+   +I       G     P A 
Subjt:  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAF

Query:  HDICMQHLEENLRKKFKKENI
        H  C+ HL       F+  N+
Subjt:  HDICMQHLEENLRKKFKKENI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTGAATGACCAAGAGGTGAAGTTTAGTGTCTTTGATGCCATAAAGTCCCCAACTGATATTGAAGAGTGTTCTGTCATTCAAGTGAAAGATAAGCTGGTT
GATGATCAAGTTGAGAAGGAAATGAGAGAGCAACACATACAACAGTTGGGAAAAATTGGAATTGAGGATTTGGAATTAAACAAATTGGAGCTTGAACTTGAAAGT
ACTGTAGGTAGATGGGAAGCTGTTTCCAATACTGCAAGTGCACGGGTCGCAAATGCATCCATCAGGGGATTTAGGAGTTGCATTCGCCTAGTTCTAGTGGTTGAT
GGAGCTCACCTACGAGGAAAATACAATGGCAAAATGTTACTTGCAACCGGTGTGGATAGTAATAATCATATATACCCAATTGGGTTTGGAATAGCCGATGGGAAG
ACCGATGAATCTTGGAGTTATTTTTTCCGACACATGGAACGCACAATTGGACAACTTCTTAATCTAGTAATAGTTTCTAACAGACACCCTAACATTCGAAAGGGA
ATAAGAACGGTGTTTCCTAATGCATTTCACGACATATGCATGCAACATTTGGAAGAAAATTTGAGGAAAAAATTTAAGAAAGAAAACATTGTACCAATTTTCAAA
CTTATTGCAAAAGCATTTCGTGATTGCAAGTTTAATGAAGGCTATAAAGACGAAGTCAATAGTGGACGACTAACAATGACTAGAATATTGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTGAATGACCAAGAGGTGAAGTTTAGTGTCTTTGATGCCATAAAGTCCCCAACTGATATTGAAGAGTGTTCTGTCATTCAAGTGAAAGATAAGCTGGTT
GATGATCAAGTTGAGAAGGAAATGAGAGAGCAACACATACAACAGTTGGGAAAAATTGGAATTGAGGATTTGGAATTAAACAAATTGGAGCTTGAACTTGAAAGT
ACTGTAGGTAGATGGGAAGCTGTTTCCAATACTGCAAGTGCACGGGTCGCAAATGCATCCATCAGGGGATTTAGGAGTTGCATTCGCCTAGTTCTAGTGGTTGAT
GGAGCTCACCTACGAGGAAAATACAATGGCAAAATGTTACTTGCAACCGGTGTGGATAGTAATAATCATATATACCCAATTGGGTTTGGAATAGCCGATGGGAAG
ACCGATGAATCTTGGAGTTATTTTTTCCGACACATGGAACGCACAATTGGACAACTTCTTAATCTAGTAATAGTTTCTAACAGACACCCTAACATTCGAAAGGGA
ATAAGAACGGTGTTTCCTAATGCATTTCACGACATATGCATGCAACATTTGGAAGAAAATTTGAGGAAAAAATTTAAGAAAGAAAACATTGTACCAATTTTCAAA
CTTATTGCAAAAGCATTTCGTGATTGCAAGTTTAATGAAGGCTATAAAGACGAAGTCAATAGTGGACGACTAACAATGACTAGAATATTGGGTTGA
Protein sequenceShow/hide protein sequence
MRVNDQEVKFSVFDAIKSPTDIEECSVIQVKDKLVDDQVEKEMREQHIQQLGKIGIEDLELNKLELELESTVGRWEAVSNTASARVANASIRGFRSCIRLVLVVD
GAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIFK
LIAKAFRDCKFNEGYKDEVNSGRLTMTRILG