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Lag0015478 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015478
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein translocase subunit SecA
Genome locationchr12:13908958..13912479
RNA-Seq ExpressionLag0015478
SyntenyLag0015478
Gene Ontology termsGO:0006605 - protein targeting (biological process)
GO:0017038 - protein import (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0015462 - ATPase-coupled protein transmembrane transporter activity (molecular function)
GO:0016464 - chloroplast protein-transporting ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451988.1 PREDICTED: protein translocase subunit SECA2, chloroplastic isoform X2 [Cucumis melo]9.8e-1370.37Show/hide
Query:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        +  S    +++YMQ VVDEIVFNHVDP K+PRSW LGKLVQEFKTIGGKILE +
Subjt:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
XP_022136544.1 protein translocase subunit SECA2, chloroplastic isoform X1 [Momordica charantia]8.9e-1478.43Show/hide
Query:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        S    +++YMQ VVDEIVFNHVDPMK+PRSWSLGKLV EFKTIGGKILE M
Subjt:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
XP_022136545.1 protein translocase subunit SECA2, chloroplastic isoform X2 [Momordica charantia]2.6e-1379.59Show/hide
Query:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
        S    +++YMQ VVDEIVFNHVDPMK+PRSWSLGKLV EFKTIGGKILE
Subjt:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
XP_038882245.1 protein translocase subunit SECA2, chloroplastic isoform X1 [Benincasa hispida]5.2e-1474.07Show/hide
Query:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        +  S    +++YMQ VVDEIVFNHVDPMK+PRSWSLGKLVQEFKTIGGKILE +
Subjt:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
XP_038882251.1 protein translocase subunit SECA2, chloroplastic isoform X2 [Benincasa hispida]5.2e-1474.07Show/hide
Query:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        +  S    +++YMQ VVDEIVFNHVDPMK+PRSWSLGKLVQEFKTIGGKILE +
Subjt:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
TrEMBL top hitse value%identityAlignment
A0A1S3BSU7 Chloroplast protein-transporting ATPase4.7e-1370.37Show/hide
Query:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        +  S    +++YMQ VVDEIVFNHVDP K+PRSW LGKLVQEFKTIGGKILE +
Subjt:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
A0A5A7TMY3 Protein translocase subunit SecA4.7e-1370.37Show/hide
Query:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        +  S    +++YMQ VVDEIVFNHVDP K+PRSW LGKLVQEFKTIGGKILE +
Subjt:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
A0A5D3D1P1 Protein translocase subunit SecA4.7e-1370.37Show/hide
Query:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        +  S    +++YMQ VVDEIVFNHVDP K+PRSW LGKLVQEFKTIGGKILE +
Subjt:  HGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
A0A6J1C478 Protein translocase subunit SecA1.2e-1379.59Show/hide
Query:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
        S    +++YMQ VVDEIVFNHVDPMK+PRSWSLGKLV EFKTIGGKILE
Subjt:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
A0A6J1C4L7 Protein translocase subunit SecA4.3e-1478.43Show/hide
Query:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
        S    +++YMQ VVDEIVFNHVDPMK+PRSWSLGKLV EFKTIGGKILE M
Subjt:  SAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGM
SwissProt top hitse value%identityAlignment
D8WUA4 Protein translocase subunit SECA2, chloroplastic2.9e-0744.07Show/hide
Query:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
        R L       S    +++YMQ VVDEIV  + +P K+PR WSL KL++EF  I G +L+
Subjt:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
P57742 Probable prefoldin subunit 56.6e-0444.26Show/hide
Query:  TLPSRVDIASTAFLDLSLRPQEN---VGASYCIALCAMLDYVDKVLVDVGTRYFVEVSLVD
        T   R+D A+ A  DLSLRPQ     V  +  + +   LD  DKVLVD+GT YF+E ++ D
Subjt:  TLPSRVDIASTAFLDLSLRPQEN---VGASYCIALCAMLDYVDKVLVDVGTRYFVEVSLVD
Q9FI46 Chromophore lyase CRL, chloroplastic2.4e-0652.94Show/hide
Query:  MTTCPAVEMVDGSMVLY------------FEQRFYTVKPCSKERKCDMELT
        M +CPA EMVDGS VLY            F QR Y VKPC KE KCD+E++
Subjt:  MTTCPAVEMVDGSMVLY------------FEQRFYTVKPCSKERKCDMELT
Arabidopsis top hitse value%identityAlignment
AT1G21650.1 Preprotein translocase SecA family protein2.0e-0844.07Show/hide
Query:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
        R L       S    +++YMQ VVDEIV  + +P K+PR WSL KL++EF  I G +L+
Subjt:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
AT1G21650.2 Preprotein translocase SecA family protein2.0e-0844.07Show/hide
Query:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
        R L       S    +++YMQ VVDEIV  + +P K+PR WSL KL++EF  I G +L+
Subjt:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
AT1G21650.3 Preprotein translocase SecA family protein2.0e-0844.07Show/hide
Query:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
        R L       S    +++YMQ VVDEIV  + +P K+PR WSL KL++EF  I G +L+
Subjt:  RSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILE
AT5G23290.1 prefoldin 54.7e-0544.26Show/hide
Query:  TLPSRVDIASTAFLDLSLRPQEN---VGASYCIALCAMLDYVDKVLVDVGTRYFVEVSLVD
        T   R+D A+ A  DLSLRPQ     V  +  + +   LD  DKVLVD+GT YF+E ++ D
Subjt:  TLPSRVDIASTAFLDLSLRPQEN---VGASYCIALCAMLDYVDKVLVDVGTRYFVEVSLVD
AT5G51020.1 crumpled leaf1.7e-0752.94Show/hide
Query:  MTTCPAVEMVDGSMVLY------------FEQRFYTVKPCSKERKCDMELT
        M +CPA EMVDGS VLY            F QR Y VKPC KE KCD+E++
Subjt:  MTTCPAVEMVDGSMVLY------------FEQRFYTVKPCSKERKCDMELT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCTTTGCTTACTTCCTTCGAAGCTGACGAAGGCACACGTTCACTAACGAGCCACGTACACGGAAGTTCTGCACACTCTTTTGTTTATAGGTATATGCAAGTTGT
GGTCGATGAGATCGTCTTTAATCATGTTGATCCAATGAAGAATCCTAGAAGCTGGAGTTTGGGTAAACTTGTGCAGGAGTTTAAGACAATCGGAGGGAAGATATTGGAGG
GTATGCAATATGTGGATGTTGTTTTGTTGCTAATGACCACGTGCCCTGCAGTAGAAATGGTTGATGGTTCTATGGTGTTGTACTTCGAACAAAGATTTTATACGGTGAAA
CCTTGTTCAAAGGAGAGGAAATGTGATATGGAGCTAACTCTCCCTTCTCGCGTCGACATTGCCTCCACCGCCTTTCTTGATCTTTCGCTTCGACCTCAAGAAAATGTTGG
TGCCTCTTACTGCATCGCTTTATGTGCGATGCTCGATTATGTTGATAAGGTCTTGGTGGATGTCGGCACTAGATACTTTGTTGAGGTCAGTTTAGTGGACTTTTGGACCT
CATTCTTTGGTTTCCATTCTCCAGTTCTTGATTCATTTTTTTCTTGCATCACGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCTTTGCTTACTTCCTTCGAAGCTGACGAAGGCACACGTTCACTAACGAGCCACGTACACGGAAGTTCTGCACACTCTTTTGTTTATAGGTATATGCAAGTTGT
GGTCGATGAGATCGTCTTTAATCATGTTGATCCAATGAAGAATCCTAGAAGCTGGAGTTTGGGTAAACTTGTGCAGGAGTTTAAGACAATCGGAGGGAAGATATTGGAGG
GTATGCAATATGTGGATGTTGTTTTGTTGCTAATGACCACGTGCCCTGCAGTAGAAATGGTTGATGGTTCTATGGTGTTGTACTTCGAACAAAGATTTTATACGGTGAAA
CCTTGTTCAAAGGAGAGGAAATGTGATATGGAGCTAACTCTCCCTTCTCGCGTCGACATTGCCTCCACCGCCTTTCTTGATCTTTCGCTTCGACCTCAAGAAAATGTTGG
TGCCTCTTACTGCATCGCTTTATGTGCGATGCTCGATTATGTTGATAAGGTCTTGGTGGATGTCGGCACTAGATACTTTGTTGAGGTCAGTTTAGTGGACTTTTGGACCT
CATTCTTTGGTTTCCATTCTCCAGTTCTTGATTCATTTTTTTCTTGCATCACGCCTTAA
Protein sequenceShow/hide protein sequence
MSPLLTSFEADEGTRSLTSHVHGSSAHSFVYRYMQVVVDEIVFNHVDPMKNPRSWSLGKLVQEFKTIGGKILEGMQYVDVVLLLMTTCPAVEMVDGSMVLYFEQRFYTVK
PCSKERKCDMELTLPSRVDIASTAFLDLSLRPQENVGASYCIALCAMLDYVDKVLVDVGTRYFVEVSLVDFWTSFFGFHSPVLDSFFSCITP