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Lag0015490 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015490
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr12:14125352..14126206
RNA-Seq ExpressionLag0015490
SyntenyLag0015490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]5.3e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

TYK17989.1 uncharacterized protein E5676_scaffold306G002980 [Cucumis melo var. makuwa]3.1e-2155.37Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFID S   PPKTIS+  ++SS++      T  +S      P YEDW AKDQA M LIN TLS+ AL YVVGC SS Q W+ LE+HYSS++RTNIVNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKKLVEEDHLVVGEIE
        DLQ  SKK  E   L + +I+
Subjt:  DLQSTSKKLVEEDHLVVGEIE

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]5.3e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]5.3e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

XP_016900446.1 PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]5.3e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X22.6e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X32.6e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X12.6e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

A0A5D3CLI6 T4.52.6e-2157.41Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFIDG+  CPP+T +SS++S              ++  Q  P YEDW+AKDQA MT+IN TLS  ALAYVVG TSSKQ W+VL K YSS SR+N+VNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKK
        DLQ+  KK
Subjt:  DLQSTSKK

A0A5D3D3T6 Retrotran_gag_3 domain-containing protein1.5e-2155.37Show/hide
Query:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS
        GFID S   PPKTIS+  ++SS++      T  +S      P YEDW AKDQA M LIN TLS+ AL YVVGC SS Q W+ LE+HYSS++RTNIVNLKS
Subjt:  GFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVNLKS

Query:  DLQSTSKKLVEEDHLVVGEIE
        DLQ  SKK  E   L + +I+
Subjt:  DLQSTSKKLVEEDHLVVGEIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCATTGGGTTCATCGATGGATCTACAATATGCCCTCCAAAGACGATTTCATCATCAGCTTCGTCTTCCTCAACCTC
TGCTGATGTTGCACCTGATACACCTCTTGCTTCTATTGTTTCTCAGATTAAACCCCTTTATGAAGATTGGGTTGCTAAAGACCAAGCCTCAATGACACTGATCAACCCCA
CACTCTCACTGGTAGCTTTGGCCTATGTCGTTGGTTGTACATCATCCAAACAAGCTTGGGAAGTCCTAGAGAAACACTATTCCTCAAGTTCAAGAACCAACATCGTCAAT
CTAAAATCCGACCTTCAATCTACCTCCAAGAAACTAGTTGAGGAAGATCATCTGGTCGTGGGCGAAATCGAAGCCATGGTGGTCGTGGCTTCAATCCATTTGGGTGAGGA
AATTTCAGTCAAGGCAAAGGATTATTTTCTTCTCCACAATCATTTGGTGGACAGGGTCGTGTCTCCTACCAAATTTGTCAACGCCCTGGACACAATGCCATCGACTGCTA
CAATAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCATTGGGTTCATCGATGGATCTACAATATGCCCTCCAAAGACGATTTCATCATCAGCTTCGTCTTCCTCAACCTC
TGCTGATGTTGCACCTGATACACCTCTTGCTTCTATTGTTTCTCAGATTAAACCCCTTTATGAAGATTGGGTTGCTAAAGACCAAGCCTCAATGACACTGATCAACCCCA
CACTCTCACTGGTAGCTTTGGCCTATGTCGTTGGTTGTACATCATCCAAACAAGCTTGGGAAGTCCTAGAGAAACACTATTCCTCAAGTTCAAGAACCAACATCGTCAAT
CTAAAATCCGACCTTCAATCTACCTCCAAGAAACTAGTTGAGGAAGATCATCTGGTCGTGGGCGAAATCGAAGCCATGGTGGTCGTGGCTTCAATCCATTTGGGTGAGGA
AATTTCAGTCAAGGCAAAGGATTATTTTCTTCTCCACAATCATTTGGTGGACAGGGTCGTGTCTCCTACCAAATTTGTCAACGCCCTGGACACAATGCCATCGACTGCTA
CAATAGAATGA
Protein sequenceShow/hide protein sequence
MRFRCVGTFIPFIGFIDGSTICPPKTISSSASSSSTSADVAPDTPLASIVSQIKPLYEDWVAKDQASMTLINPTLSLVALAYVVGCTSSKQAWEVLEKHYSSSSRTNIVN
LKSDLQSTSKKLVEEDHLVVGEIEAMVVVASIHLGEEISVKAKDYFLLHNHLVDRVVSPTKFVNALDTMPSTATIE