; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015496 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015496
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:14385816..14386199
RNA-Seq ExpressionLag0015496
SyntenyLag0015496
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.9e-2444.8Show/hide
Query:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE
        + PTIEEY+ L+ +P     + Y YD KLT++ +L   +G I  SE++KQ+K K    C+P++Y++ L +   +  K L+L+ALCI+   +FP++ GYVE
Subjt:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE

Query:  EQVVKLFAKIEIGVGPIIPILAETF
        E+VVK+F  IE GV P+IPI+ ETF
Subjt:  EQVVKLFAKIEIGVGPIIPILAETF

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.0e-2345.6Show/hide
Query:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE
        + PTIEEYQ L+ +P       Y YD KLT++ +L   +G I  SE++KQ+K K    C+P++Y++ L +        L+L+ALCI+   +FP++ GYVE
Subjt:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE

Query:  EQVVKLFAKIEIGVGPIIPILAETF
        E+VVK+F  IE GV P+IPI+AETF
Subjt:  EQVVKLFAKIEIGVGPIIPILAETF

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.9e-2444.8Show/hide
Query:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE
        + PTIEEY+ L+ +P     + Y YD KLT++ +L   +G I  SE++KQ+K K    C+P++Y++ L +   +  K L+L+ALCI+   +FP++ GYVE
Subjt:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE

Query:  EQVVKLFAKIEIGVGPIIPILAETF
        E+VVK+F  IE GV P+IPI+ ETF
Subjt:  EQVVKLFAKIEIGVGPIIPILAETF

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]3.1e-3360.98Show/hide
Query:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ
        PTIEEY  LL +P + +IE YSYD   T+K A+  L+GKI   EIEK VK KGENTCLP++YI +L+ +  NE++EL+LLALC+FN+ LFP V  YVEE 
Subjt:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ

Query:  VVKLFAKIEIGVGPIIPILAETF
        VVKLF K+E+GV  +IPILAETF
Subjt:  VVKLFAKIEIGVGPIIPILAETF

XP_022150759.1 uncharacterized protein LOC111018820 [Momordica charantia]3.7e-3460.98Show/hide
Query:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ
        PTI+EY  LL +P + +IE YSYD   T+K A+  L+GKI   EIEK VK KGENTCLP++YIL+L+++  NE++EL+LLALC+FN+ LFPKV GYVEE+
Subjt:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ

Query:  VVKLFAKIEIGVGPIIPILAETF
        +VKLF K+E+ V  +IPILAETF
Subjt:  VVKLFAKIEIGVGPIIPILAETF

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like2.9e-2444.8Show/hide
Query:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE
        + PTIEEY+ L+ +P     + Y YD KLT++ +L   +G I  SE++KQ+K K    C+P++Y++ L +   +  K L+L+ALCI+   +FP++ GYVE
Subjt:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE

Query:  EQVVKLFAKIEIGVGPIIPILAETF
        E+VVK+F  IE GV P+IPI+ ETF
Subjt:  EQVVKLFAKIEIGVGPIIPILAETF

A0A5A7UWQ6 Uncharacterized protein4.9e-2448Show/hide
Query:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE
        ++PTIEEYQ +L MP +     Y ++ K T K  L   L  +  +EI+K +KIKG    +P DY++ + +   +EDK LTLLALCI+   +FPK  GYV+
Subjt:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE

Query:  EQVVKLFAKIEIGVGPIIPILAETF
         +V+KLF ++E GV PIIPILAETF
Subjt:  EQVVKLFAKIEIGVGPIIPILAETF

A0A5D3D0S2 Glial fibrillary acidic protein-like2.9e-2444.8Show/hide
Query:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE
        + PTIEEY+ L+ +P     + Y YD KLT++ +L   +G I  SE++KQ+K K    C+P++Y++ L +   +  K L+L+ALCI+   +FP++ GYVE
Subjt:  MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVE

Query:  EQVVKLFAKIEIGVGPIIPILAETF
        E+VVK+F  IE GV P+IPI+ ETF
Subjt:  EQVVKLFAKIEIGVGPIIPILAETF

A0A6J1CZG4 uncharacterized protein LOC1110162011.5e-3360.98Show/hide
Query:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ
        PTIEEY  LL +P + +IE YSYD   T+K A+  L+GKI   EIEK VK KGENTCLP++YI +L+ +  NE++EL+LLALC+FN+ LFP V  YVEE 
Subjt:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ

Query:  VVKLFAKIEIGVGPIIPILAETF
        VVKLF K+E+GV  +IPILAETF
Subjt:  VVKLFAKIEIGVGPIIPILAETF

A0A6J1DB13 uncharacterized protein LOC1110188201.8e-3460.98Show/hide
Query:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ
        PTI+EY  LL +P + +IE YSYD   T+K A+  L+GKI   EIEK VK KGENTCLP++YIL+L+++  NE++EL+LLALC+FN+ LFPKV GYVEE+
Subjt:  PTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQ

Query:  VVKLFAKIEIGVGPIIPILAETF
        +VKLF K+E+ V  +IPILAETF
Subjt:  VVKLFAKIEIGVGPIIPILAETF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCTACAATAGAGGAATATCAATACCTTCTACATATGCCAACACGAACAGAGATTGAAGCTTACTCTTACGATGAAAAGCTTACAATGAAAATTGCGTTATTTGC
TCTTTTGGGCAAGATTCGTACAAGCGAAATTGAGAAACAAGTAAAGATAAAGGGAGAGAACACATGCCTACCCATGGACTACATCCTTACTCTTCGAAAAAAAATTGCAA
ACGAAGACAAGGAATTAACTTTGCTAGCACTGTGTATTTTTAATGTTGCTCTGTTTCCTAAAGTGTGCGGATATGTTGAGGAACAAGTGGTCAAGTTGTTTGCTAAGATA
GAAATAGGAGTTGGTCCCATTATTCCTATATTGGCAGAAACCTTTTTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCTACAATAGAGGAATATCAATACCTTCTACATATGCCAACACGAACAGAGATTGAAGCTTACTCTTACGATGAAAAGCTTACAATGAAAATTGCGTTATTTGC
TCTTTTGGGCAAGATTCGTACAAGCGAAATTGAGAAACAAGTAAAGATAAAGGGAGAGAACACATGCCTACCCATGGACTACATCCTTACTCTTCGAAAAAAAATTGCAA
ACGAAGACAAGGAATTAACTTTGCTAGCACTGTGTATTTTTAATGTTGCTCTGTTTCCTAAAGTGTGCGGATATGTTGAGGAACAAGTGGTCAAGTTGTTTGCTAAGATA
GAAATAGGAGTTGGTCCCATTATTCCTATATTGGCAGAAACCTTTTTCCATTAA
Protein sequenceShow/hide protein sequence
MIPTIEEYQYLLHMPTRTEIEAYSYDEKLTMKIALFALLGKIRTSEIEKQVKIKGENTCLPMDYILTLRKKIANEDKELTLLALCIFNVALFPKVCGYVEEQVVKLFAKI
EIGVGPIIPILAETFFH