| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0041253.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.8e-59 | 58.37 | Show/hide |
Query: LVTTASLEKKNISNLNSQVKYPDIRDSPRS--------VRARHCNSPWQFAI-LRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPY
LV +LEK+++ + + ++ +I + + V R P Q I I L++GA VN+RP RYAH QK E+E+L+ EML GIIRPS SPY
Subjt: LVTTASLEKKNISNLNSQVKYPDIRDSPRS--------VRARHCNSPWQFAI-LRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPY
Query: SSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPL
SS VLL++KKDGSWRFCVDYRALNNVTVP+KFPIPVVEEL DEL+G+ ++SKIDLK+ Y QIR+H EDI KT FR HEGHYEF VM FGLTNAP+TFQ L
Subjt: SSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPL
Query: MNRIFRHLL
MN++F+ L
Subjt: MNRIFRHLL
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| TYK10423.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| TYK23724.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| TYK26407.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TDM4 Ty3/gypsy retrotransposon protein | 2.3e-59 | 58.37 | Show/hide |
Query: LVTTASLEKKNISNLNSQVKYPDIRDSPRS--------VRARHCNSPWQFAI-LRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPY
LV +LEK+++ + + ++ +I + + V R P Q I I L++GA VN+RP RYAH QK E+E+L+ EML GIIRPS SPY
Subjt: LVTTASLEKKNISNLNSQVKYPDIRDSPRS--------VRARHCNSPWQFAI-LRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPY
Query: SSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPL
SS VLL++KKDGSWRFCVDYRALNNVTVP+KFPIPVVEEL DEL+G+ ++SKIDLK+ Y QIR+H EDI KT FR HEGHYEF VM FGLTNAP+TFQ L
Subjt: SSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPL
Query: MNRIFRHLL
MN++F+ L
Subjt: MNRIFRHLL
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| A0A5D3CEX8 Ty3/gypsy retrotransposon protein | 1.8e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| A0A5D3DD68 Ty3/gypsy retrotransposon protein | 1.8e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| A0A5D3DJA9 Ty3/gypsy retrotransposon protein | 1.8e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| A0A5D3DRT3 Ty3/gypsy retrotransposon protein | 1.8e-59 | 57.28 | Show/hide |
Query: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
N +A G P R LV T ++E+ Q ++ D+ + P + P + RI L+EG +N+RP RY HAQK EIE+L+ +ML GIIRPS
Subjt: NVQAFGTP---RRLVTTASLEKKNISNLNSQVKYPDIRDSPRSVRARHCNSPWQFAILRITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPS
Query: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
SP+SS V+L+KKKDG WRFCVDYRALN TVP+KFPIP+++ELLDEL G++I+SKIDLKS Y QIRV EDI+KTAFR HEGHYEF VM FGLTNAP T
Subjt: VSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTT
Query: FQPLMNRIFRHLL
FQ LMN++FR L
Subjt: FQPLMNRIFRHLL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 5.5e-26 | 44.76 | Show/hide |
Query: YAHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLI-KKKDGS----WRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHR
Y A + E+E I +ML GIIR S SPY+S + ++ KK+D S +R +DYR LN +TV ++ PIP ++E+L +L ++ IDL + QI +
Subjt: YAHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLI-KKKDGS----WRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHR
Query: EDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHLL
E ++KTAF GHYE+ M FGL NAP TFQ MN I R LL
Subjt: EDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHLL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.1e-26 | 42.96 | Show/hide |
Query: AHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLIKKKD-----GSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHRE
A ++E+E + EML G+IR S SPY+S ++ KK +R +DYR LN +T+P+++PIP ++E+L +L ++ IDL + QI + E
Subjt: AHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLIKKKD-----GSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDLKSSYDQIRVHRE
Query: DITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHLL
I+KTAF GHYE+ M FGL NAP TFQ MN I R LL
Subjt: DITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHLL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.1e-29 | 42.48 | Show/hide |
Query: ITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDL
I ++ GA L+P + EI K++ ++L+ I PS SP SS V+L+ KKDG++R CVDYR LN T+ + FP+P ++ LL + + I++ +DL
Subjt: ITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDL
Query: KSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHL
S Y QI + +D KTAF G YE+ VM FGL NAP+TF M FR L
Subjt: KSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHL
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| Q8L785 Glycine--tRNA ligase, chloroplastic/mitochondrial 2 | 1.2e-33 | 64.76 | Show/hide |
Query: FGNGKSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLDAAIKKVHEDVRWFVLEIGTEEIPPKDVVDASQQLKTYMLQLLEKHRLSHGNVQAFGT
FG +SLARQCAQLWL TRESLGHPLGV S+PV VC + L+ +KV ED R F++EIGTEE+PP+DV++AS+QL+ +L+LLE RL HG V+AFGT
Subjt: FGNGKSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLDAAIKKVHEDVRWFVLEIGTEEIPPKDVVDASQQLKTYMLQLLEKHRLSHGNVQAFGT
Query: PRRLV
PRRLV
Subjt: PRRLV
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 4.1e-29 | 42.48 | Show/hide |
Query: ITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDL
I ++ GA L+P + EI K++ ++L+ I PS SP SS V+L+ KKDG++R CVDYR LN T+ + FP+P ++ LL + + I++ +DL
Subjt: ITLQEGAGSVNLRPSRYAHAQKMEIEKLIAEMLEVGIIRPSVSPYSSLVLLIKKKDGSWRFCVDYRALNNVTVPEKFPIPVVEELLDELHGSTIYSKIDL
Query: KSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHL
S Y QI + +D KTAF G YE+ VM FGL NAP+TF M FR L
Subjt: KSSYDQIRVHREDITKTAFRIHEGHYEFPVMRFGLTNAPTTFQPLMNRIFRHL
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