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Lag0015517 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015517
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionimportin beta-like SAD2
Genome locationchr12:15014982..15015420
RNA-Seq ExpressionLag0015517
SyntenyLag0015517
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005635 - nuclear envelope (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR013713 - Exportin-2, central domain
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575328.1 Importin beta-like SAD2, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3791.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

TYK24814.1 importin beta-like SAD2 [Cucumis melo var. makuwa]1.5e-3791.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

XP_011649413.1 importin beta-like SAD2 [Cucumis sativus]1.5e-3791.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

XP_022929819.1 importin beta-like SAD2 isoform X1 [Cucurbita moschata]1.5e-3791.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

XP_023549155.1 importin beta-like SAD2 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-3791.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

TrEMBL top hitse value%identityAlignment
A0A0A0LQB3 Importin N-terminal domain-containing protein7.2e-3891.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

A0A5A7V294 Importin beta-like SAD27.2e-3891.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

A0A5D3DMJ9 Importin beta-like SAD27.2e-3891.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

A0A6J1JUP8 importin beta-like SAD2 isoform X27.2e-3891.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

A0A6J1JWK7 importin beta-like SAD2 isoform X17.2e-3891.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLW++DPHEYVRK YDIIE+LYSPRTASMDFVSELVRKRGKENLQKFIQFI GIFNRYDE TIEFKPY QKDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

SwissProt top hitse value%identityAlignment
F4IRR2 Importin beta-like SAD21.8e-3376.47Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLWE+DPHEYVRK Y+IIE+LYSPRTASMDFV+ELVRKRGKENL KF++F+  IF  Y++ T+E KPY QKDGA+LA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

F4J738 Importin beta-like SAD2 homolog1.8e-3377.65Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQ LW++DPHEYVRK YDIIE+LYSPRTASMDFV+ELVRKRGKEN  KFIQF+  IF RY+E ++E KPY  KDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

O15397 Importin-82.6e-0839.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGAL
        MC+ D D++LW++DP+EY+R  +DI E+  SP TA+   +    +KR KE L K + F   I          F P  +KDGAL
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGAL

Q55CX9 Probable importin-7 homolog5.7e-0834.12Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEET-IEFKPYTQKDGALL
        +CFND D +LWE DP+E++R  ++      + R   ++F+ ++V KRG+ NL   + F     N+Y+  T    K   +KDG L+
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEET-IEFKPYTQKDGALL

Q7TMY7 Importin-82.6e-0839.76Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGAL
        MC+ D D++LW++DP+EY+R  +DI E+  SP TA+   +    +KR KE L K + F   I          F P  +KDGAL
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGAL

Arabidopsis top hitse value%identityAlignment
AT2G31660.1 ARM repeat superfamily protein1.3e-3476.47Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQKLWE+DPHEYVRK Y+IIE+LYSPRTASMDFV+ELVRKRGKENL KF++F+  IF  Y++ T+E KPY QKDGA+LA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

AT3G59020.1 ARM repeat superfamily protein1.3e-3477.65Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQ LW++DPHEYVRK YDIIE+LYSPRTASMDFV+ELVRKRGKEN  KFIQF+  IF RY+E ++E KPY  KDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA

AT3G59020.2 ARM repeat superfamily protein1.3e-3477.65Show/hide
Query:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA
        MCFNDNDQ LW++DPHEYVRK YDIIE+LYSPRTASMDFV+ELVRKRGKEN  KFIQF+  IF RY+E ++E KPY  KDGALLA
Subjt:  MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTTCAATGACAATGATCAGAAGCTTTGGGAGGACGATCCTCATGAATATGTCAGGAAGTGTTATGATATTATCGAGGAATTATATAGTCCAAGGACTGCTTCTAT
GGATTTTGTCAGTGAGCTGGTCAGGAAGCGTGGGAAAGAAAACCTTCAAAAGTTTATCCAATTCATCGGTGGAATTTTCAATAGGTACGACGAAGAAACTATTGAATTTA
AGCCTTATACACAGAAAGATGGGGCTCTTCTTGCTACGGAGCGCACTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTTCAATGACAATGATCAGAAGCTTTGGGAGGACGATCCTCATGAATATGTCAGGAAGTGTTATGATATTATCGAGGAATTATATAGTCCAAGGACTGCTTCTAT
GGATTTTGTCAGTGAGCTGGTCAGGAAGCGTGGGAAAGAAAACCTTCAAAAGTTTATCCAATTCATCGGTGGAATTTTCAATAGGTACGACGAAGAAACTATTGAATTTA
AGCCTTATACACAGAAAGATGGGGCTCTTCTTGCTACGGAGCGCACTCTATGA
Protein sequenceShow/hide protein sequence
MCFNDNDQKLWEDDPHEYVRKCYDIIEELYSPRTASMDFVSELVRKRGKENLQKFIQFIGGIFNRYDEETIEFKPYTQKDGALLATERTL