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Lag0015520 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015520
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:15171059..15173689
RNA-Seq ExpressionLag0015520
SyntenyLag0015520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015388578.1 uncharacterized protein LOC107178209 [Citrus sinensis]3.6e-2040Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD
        ++ K  Y+ H+ FL A +G+ PS++WR ILWGR++ +KG RWR+G+G+ + ++   W+PR  TF+ +SP+    D +V  L+     W +DL+   FVQ+
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD

Query:  DVATIQEILL
        D   IQ I L
Subjt:  DVATIQEILL

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]2.3e-1937.5Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDF-RVSSLVS-SSLTWNIDLLTNLFV
        QI+K  YYPH D  +A LG+ PSY WR I  G E+  +G RWRVGNG+ I I+ED+W+P   T+K++SP +P  D+ RVS+L+      W  D++ +LF+
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDF-RVSSLVS-SSLTWNIDLLTNLFV

Query:  QDDVATIQEILLQ---------GVNKQTVSFGI------------TISEANILYGVDISLLWRTLRMSHHLQIPPK
          +  TI  I L           V  +   F +             +       G   SLLWR L    HL IPPK
Subjt:  QDDVATIQEILLQ---------GVNKQTVSFGI------------TISEANILYGVDISLLWRTLRMSHHLQIPPK

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]1.5e-1844.23Show/hide
Query:  YYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQDDVATIQ
        Y+ H+DF+ A LGS PS++WR ILWGR++  KG +WR+GNG+SI + ++ W+PR  TFK +S     +D  V+ L++   TWN  L+   F + D   I 
Subjt:  YYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQDDVATIQ

Query:  EILL
         ILL
Subjt:  EILL

XP_024038356.1 uncharacterized protein LOC112097383 [Citrus clementina]6.7e-1940.65Show/hide
Query:  TAHQIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLF
        T  ++ K  Y+ H  F++A LGS PSY+WR ILWGRE+  KG RWR+G+GK I IF   WIPR  TFK ++     S   V+ L+  +  WN  ++   F
Subjt:  TAHQIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLF

Query:  VQDDVATIQEILLQGVNKQTVSF
         +DD   I +I L     + + F
Subjt:  VQDDVATIQEILLQGVNKQTVSF

XP_030964226.1 uncharacterized protein LOC115985426 [Quercus lobata]8.8e-1945.54Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDF-RVSSLVS-SSLTWNIDLLTNLFV
        +++K  YY + D L + LG  PSY WR I  G E+  KG RWRVGNG+ I I+ED+W+P   T+K++SP RP  DF  VS+L+   +  W +D L +LF+
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDF-RVSSLVS-SSLTWNIDLLTNLFV

Query:  QDDVATIQEILL
          +V TI  I L
Subjt:  QDDVATIQEILL

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein3.6e-1842.73Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD
        +I++  Y+P   FL+A +G+ PS++WR + WG+EL  KG RWRVG+G SI ++ D+W+P    FKI+SP +     RV  L +SS  WN+ LL ++F   
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD

Query:  DVATIQEILL
        +V  I +I L
Subjt:  DVATIQEILL

A0A6J5TGK7 CCHC-type domain-containing protein1.2e-1845.05Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILS-PKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQ
        +I++  Y+P   FL+AG+G+ PS++WR + WG+EL  KG RWRVGNG+SI ++ ++W+P    FKI+S P+ PLS   V  L +SS  WN+ LL ++F  
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILS-PKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQ

Query:  DDVATIQEILL
         +V  I +I L
Subjt:  DDVATIQEILL

A0A6P3Z8V7 uncharacterized protein LOC1074106102.8e-1840.87Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD
        ++ K  Y+P   F +AG+G +PS+ WR ++WGR +   GG WRVG+GKSI I++D W+P + + +ILSP+    D  V+ L++ S  WN++LL   F  D
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD

Query:  DVATIQEILLQGVNK
        +V  I+ I   G +K
Subjt:  DVATIQEILLQGVNK

A0A803P9P5 Uncharacterized protein7.2e-1943.59Show/hide
Query:  NFADTAHQIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLL
        N +   H+I K  Y+ +  FL+A +GS PS  WR I+WG+EL  KG RW+VGNG  I    D W+P + +FK L  K P    +VS L+++   WN  LL
Subjt:  NFADTAHQIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLL

Query:  TNLFVQDDVATIQEILL
           F++ DVA IQ I L
Subjt:  TNLFVQDDVATIQEILL

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)3.6e-1842.73Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD
        +I++  Y+P   FL+A +G+ PS++WR + WG+EL  KG RWRVG+G SI ++ D+W+P    FKI+SP +     RV  L +SS  WN+ LL ++F   
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQD

Query:  DVATIQEILL
        +V  I +I L
Subjt:  DVATIQEILL

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003103.6e-0736.21Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWI
        ++ ++ Y+PH   ++  +G+RPSY WR I+ GREL  +G    +G+G    ++ D+WI
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWI

Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9.4e-1144.44Show/hide
Query:  LTVKNKFGFVDGTLPRP---SNELNSWIICNSVVTSWILNSFSPKISASVNFADTAHQIWKNI
        L V  KFGF+DGTLP+P   S     W  CN++V  W++NS + K+  SV +A+TAH++W+++
Subjt:  LTVKNKFGFVDGTLPRP---SNELNSWIICNSVVTSWILNSFSPKISASVNFADTAHQIWKNI

AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-0831.62Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKR-PLSDF-------RVSSLV-SSSLTWNID
        +++K+ Y+   D L A LGSRPS+VW+ I   +E+  +G R  VGNG+ I I+  +W+        L  +R P  ++       +VS L+  S   W  D
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKR-PLSDF-------RVSSLV-SSSLTWNID

Query:  LLTNLFVQDDVATIQEI
        ++  LF + +   I E+
Subjt:  LLTNLFVQDDVATIQEI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.6e-0836.21Show/hide
Query:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWI
        ++ ++ Y+PH   ++  +G+RPSY WR I+ GREL  +G    +G+G    ++ D+WI
Subjt:  QIWKNIYYPHQDFLKAGLGSRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATTCTGTCACTGCCTTAGATCCTGTAGCACCTACAACTGCTACAACTTCGGCAAATTCCTCATCTAGCCTCTTTGTTCTTGAATTGTATGCGATGAAGATTGG
ATTGACGGTCAAGAACAAGTTCGGTTTTGTAGATGGAACGCTTCCTCGTCCTTCGAATGAATTGAATTCATGGATCATTTGCAACAGTGTGGTTACATCATGGATTCTCA
ACTCGTTTTCTCCAAAGATTTCTGCTAGTGTGAATTTTGCGGACACTGCTCATCAGATTTGGAAAAACATATACTACCCTCACCAAGACTTCTTGAAAGCAGGTTTGGGA
AGTAGACCATCTTATGTCTGGAGAGGAATTCTATGGGGCCGTGAATTAGCTATGAAAGGTGGCAGGTGGAGGGTTGGAAATGGAAAATCCATTGACATCTTTGAAGATCA
ATGGATTCCAAGAATGAAGACGTTTAAGATTTTATCTCCCAAGCGCCCGTTGTCAGACTTTAGAGTCAGCAGCCTAGTTTCTTCTAGCCTAACATGGAATATTGATTTGC
TAACTAATCTTTTTGTGCAGGATGATGTGGCAACAATACAAGAGATTCTATTACAGGGGGTCAACAAGCAGACAGTTTCTTTTGGCATTACGATCAGCGAGGCAAATATT
CTGTATGGAGTGGATATAAGCTTGCTATGGAGGACTCTGAGGATGAGCCATCATCTTCAGATTCCTCCAAAACCACATGGTGGCAGACCGTTTGGACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATTCTGTCACTGCCTTAGATCCTGTAGCACCTACAACTGCTACAACTTCGGCAAATTCCTCATCTAGCCTCTTTGTTCTTGAATTGTATGCGATGAAGATTGG
ATTGACGGTCAAGAACAAGTTCGGTTTTGTAGATGGAACGCTTCCTCGTCCTTCGAATGAATTGAATTCATGGATCATTTGCAACAGTGTGGTTACATCATGGATTCTCA
ACTCGTTTTCTCCAAAGATTTCTGCTAGTGTGAATTTTGCGGACACTGCTCATCAGATTTGGAAAAACATATACTACCCTCACCAAGACTTCTTGAAAGCAGGTTTGGGA
AGTAGACCATCTTATGTCTGGAGAGGAATTCTATGGGGCCGTGAATTAGCTATGAAAGGTGGCAGGTGGAGGGTTGGAAATGGAAAATCCATTGACATCTTTGAAGATCA
ATGGATTCCAAGAATGAAGACGTTTAAGATTTTATCTCCCAAGCGCCCGTTGTCAGACTTTAGAGTCAGCAGCCTAGTTTCTTCTAGCCTAACATGGAATATTGATTTGC
TAACTAATCTTTTTGTGCAGGATGATGTGGCAACAATACAAGAGATTCTATTACAGGGGGTCAACAAGCAGACAGTTTCTTTTGGCATTACGATCAGCGAGGCAAATATT
CTGTATGGAGTGGATATAAGCTTGCTATGGAGGACTCTGAGGATGAGCCATCATCTTCAGATTCCTCCAAAACCACATGGTGGCAGACCGTTTGGACTCTAA
Protein sequenceShow/hide protein sequence
MSDSVTALDPVAPTTATTSANSSSSLFVLELYAMKIGLTVKNKFGFVDGTLPRPSNELNSWIICNSVVTSWILNSFSPKISASVNFADTAHQIWKNIYYPHQDFLKAGLG
SRPSYVWRGILWGRELAMKGGRWRVGNGKSIDIFEDQWIPRMKTFKILSPKRPLSDFRVSSLVSSSLTWNIDLLTNLFVQDDVATIQEILLQGVNKQTVSFGITISEANI
LYGVDISLLWRTLRMSHHLQIPPKPHGGRPFGL