| GenBank top hits | e value | %identity | Alignment |
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| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.0e-40 | 43.59 | Show/hide |
Query: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
++LLLT S+ ESK + ++ LP+ N+ Q T+K ++ +Q+ S+ GRG S++GR G +RN+PQCQIC K+G++ + + R
Subjt: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
Query: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Y + N S N+ N M AM N D NWY DSG T HLT+S N+S+ S+Y G NQI+ NG+ L I +G F S T
Subjt: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Query: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
P F LNN+L VPSITKNLIS VSQFAKDN +FFEFH T C VKD T +VLL G L++GLYKF I +P H
Subjt: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
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| KAF7831079.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora] | 3.4e-34 | 40.95 | Show/hide |
Query: SFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV--LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLD
S GN +GRG SQ R GR+W N+PQCQ+C ++GH + Y+R A LTQF +K N +P++A+ TP D +W+ D
Subjt: SFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV--LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLD
Query: SGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASLTSPSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVL
SG + HLTNS N+ V Y G Q+H+ NG+ L I+ GF+ L + + LN ILHVP ++KNL+S +S+FAKDN ++FEFH C VK Q +VL
Subjt: SGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASLTSPSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVL
Query: LHGTLHEGLYKF-NIS---KPQHSIPQFKIPS
L G +GLY F N++ KP S +F + S
Subjt: LHGTLHEGLYKF-NIS---KPQHSIPQFKIPS
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| KAF7833293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora] | 4.4e-34 | 37.97 | Show/hide |
Query: ALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQSQQQQSFGNG--RGRGRFNSSQGREGRSWNSRN-------------RPQ------
+LLL R+++ + + T ++ + + KD K+ N QS QQ +F N RGRG N++ G GR + N +PQ
Subjt: ALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQSQQQQSFGNG--RGRGRFNSSQGREGRSWNSRN-------------RPQ------
Query: --CQICNKIGHTTLKGYSRVLMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVG
CQ+CNK GH Y R F+ + F QN Q R MQA P D WY DSG T H+T + N+ S+ Y G Q+HVG
Subjt: --CQICNKIGHTTLKGYSRVLMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVG
Query: NGTCLDINLFGFASLTSPSNH--VFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLH-EGLYKFNI------SKPQHS
NG L+I G +SL SP N HLNN+LHVP+ITKNL+S VS+FA DN FFEFH T C VK QAT++VLL GT+ +GLY F+ S Q S
Subjt: NGTCLDINLFGFASLTSPSNH--VFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLH-EGLYKFNI------SKPQHS
Query: IPQFKIPSENYSLFIL
P + S + S+ L
Subjt: IPQFKIPSENYSLFIL
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| KZV26181.1 hypothetical protein F511_06348 [Dorcoceras hygrometricum] | 4.6e-39 | 41.89 | Show/hide |
Query: ALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQSQQQQSFGNGRGRGRFNSSQGREGRS-WNSRNRPQCQICNKIGHTTLKGYSRVLM
ALLL + RIE+ P+ N+T P+Q+ +N + Q Q GRGRGR GR GR W++ RP CQIC GH Y R
Subjt: ALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQSQQQQSFGNGRGRGRFNSSQGREGRS-WNSRNRPQCQICNKIGHTTLKGYSRVLM
Query: LGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQ-----AMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASLTS
+ +F P S + Q NR SP A T + S +++ WY DSG ++H+TN GN+SVSS+Y G +++ VGNG L I+ G ++L
Subjt: LGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQ-----AMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASLTS
Query: -PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFN----ISKPQH-------SIPQFKIPSEN
PS+ F L N+LHVP ITKNLIS VS+FA DN ++FEFH +FCLVKD AT VLL GTLH GLY+FN IS P H S+ K+P ++
Subjt: -PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFN----ISKPQH-------SIPQFKIPSEN
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.0e-40 | 43.59 | Show/hide |
Query: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
++LLLT S+ ESK + ++ LP+ N+ Q T+K ++ +Q+ S+ GRG S++GR G +RN+PQCQIC K+G++ + + R
Subjt: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
Query: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Y + N S N+ N M AM N D NWY DSG T HLT+S N+S+ S+Y G NQI+ NG+ L I +G F S T
Subjt: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Query: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
P F LNN+L VPSITKNLIS VSQFAKDN +FFEFH T C VKD T +VLL G L++GLYKF I +P H
Subjt: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A151RQY5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 3.6e-34 | 41.3 | Show/hide |
Query: NLRNVSQSQQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRVLMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPS
N R S + + NGRG GR N Q SWN NRPQCQIC K GH + + R FN + P N Q G S QA TP+
Subjt: NLRNVSQSQQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRVLMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPS
Query: FNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASL-TSPSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFC
D WY DSG ++H+TN N+SV + Y GN+++ +GNG+ L I G + S SN+ F +N +LHVPSITKNL+S VSQF +DN +FFEFH C
Subjt: FNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASL-TSPSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFC
Query: LVKDQATERVLLHGTLHEGLYKFNISKPQHSIPQFKIPSENYSLFIL
VK + T+ LL G +GLY F + Q+ I F ++++SL L
Subjt: LVKDQATERVLLHGTLHEGLYKFNISKPQHSIPQFKIPSENYSLFIL
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| A0A2Z7AWA7 Integrase catalytic domain-containing protein | 2.2e-39 | 41.89 | Show/hide |
Query: ALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQSQQQQSFGNGRGRGRFNSSQGREGRS-WNSRNRPQCQICNKIGHTTLKGYSRVLM
ALLL + RIE+ P+ N+T P+Q+ +N + Q Q GRGRGR GR GR W++ RP CQIC GH Y R
Subjt: ALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQSQQQQSFGNGRGRGRFNSSQGREGRS-WNSRNRPQCQICNKIGHTTLKGYSRVLM
Query: LGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQ-----AMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASLTS
+ +F P S + Q NR SP A T + S +++ WY DSG ++H+TN GN+SVSS+Y G +++ VGNG L I+ G ++L
Subjt: LGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQ-----AMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFGFASLTS
Query: -PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFN----ISKPQH-------SIPQFKIPSEN
PS+ F L N+LHVP ITKNLIS VS+FA DN ++FEFH +FCLVKD AT VLL GTLH GLY+FN IS P H S+ K+P ++
Subjt: -PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFN----ISKPQH-------SIPQFKIPSEN
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| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-40 | 43.59 | Show/hide |
Query: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
++LLLT S+ ESK + ++ LP+ N+ Q T+K ++ +Q+ S+ GRG S++GR G +RN+PQCQIC K+G++ + + R
Subjt: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
Query: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Y + N S N+ N M AM N D NWY DSG T HLT+S N+S+ S+Y G NQI+ NG+ L I +G F S T
Subjt: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Query: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
P F LNN+L VPSITKNLIS VSQFAKDN +FFEFH T C VKD T +VLL G L++GLYKF I +P H
Subjt: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-40 | 43.59 | Show/hide |
Query: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
++LLLT S+ ESK + ++ LP+ N+ Q T+K ++ +Q+ S+ GRG S++GR G +RN+PQCQIC K+G++ + + R
Subjt: VALLLTNGSRIESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSFGNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRV
Query: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Y + N S N+ N M AM N D NWY DSG T HLT+S N+S+ S+Y G NQI+ NG+ L I +G F S T
Subjt: LMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPTYHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTS
Query: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
P F LNN+L VPSITKNLIS VSQFAKDN +FFEFH T C VKD T +VLL G L++GLYKF I +P H
Subjt: PSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLLHGTLHEGLYKFNISKPQH
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| A0A5D3D3G2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-33 | 35.22 | Show/hide |
Query: KFQVLTVLEGHELEEHISEDCQPPPEKIQGHKLFKMFVALLLTNGSRI--------ESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSF
KFQ+LT LE +++E + + +PP + + T+ +R ++++ + ++ LP+ N+ Q T+K ++ SQ+ S+
Subjt: KFQVLTVLEGHELEEHISEDCQPPPEKIQGHKLFKMFVALLLTNGSRI--------ESKATINADGVLPTANLTIQNPTQKDTKNLRNVSQS--QQQQSF
Query: GNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRVLMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPT
GRG S+ G G +RN+PQCQIC K+GH+ D NWY DSG T
Subjt: GNGRGRGRFNSSQGREGRSWNSRNRPQCQICNKIGHTTLKGYSRVLMLGAYLTQFNPSSKFFPGQNSGQMYGNRFSPMQAMTTTPSFNQDCNWYLDSGPT
Query: YHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTSPSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLL
HLT+S N+S S+Y G NQI+ NG+ L I +G F S T P F L N+LHVPSITKNLIS VS FAKDN +FFEFH T C VKD +VLL
Subjt: YHLTNSFGNMSVSSKYLGNNQIHVGNGTCLDINLFG---FASLTSPSNHVFHLNNILHVPSITKNLISVVSQFAKDNFIFFEFHHTFCLVKDQATERVLL
Query: HGTLHEGLYKFNISKPQH
G L++GLYKF I +P H
Subjt: HGTLHEGLYKFNISKPQH
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