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Lag0015529 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015529
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:15310810..15311172
RNA-Seq ExpressionLag0015529
SyntenyLag0015529
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.7e-1233.33Show/hide
Query:  IWNQEHTIITN-VGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDIRDE
        IW  ++ +    +G N F  + +N   +  +LE GPW +DK +L+ +E  G     D++F+YV  W   H LP AC  R     +G L+G V+++D   E
Subjt:  IWNQEHTIITN-VGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDIRDE

Query:  TDPLWGRSLRIKIEIDV
        +    G+ +RI++ IDV
Subjt:  TDPLWGRSLRIKIEIDV

TXG70631.1 hypothetical protein EZV62_005566 [Acer yangbiense]3.4e-1333.33Show/hide
Query:  MPKIW-NQEHTIITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI
        MPKIW   +   I  +  NTF    KN + +  +L  GPW +DKA+L+  EPKG   ++D+ F  V+ W   H++P  C T     ++G+++G V+++D 
Subjt:  MPKIW-NQEHTIITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI

Query:  RDETDPLWGRSLRIKIEIDV
            D + G+ +R+++ ID+
Subjt:  RDETDPLWGRSLRIKIEIDV

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.9e-1329.75Show/hide
Query:  MPKIWNQEHTI--ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVD
        M   W  E+    + ++G+N FL     A  +  + + GPW +D+ ++L  +P   I   +++F  + IW  F  LP  C TR     +G+ LG  E+ D
Subjt:  MPKIWNQEHTI--ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVD

Query:  IRDETDPLWGRSLRIKIEIDV
          D+ +P WG +LR+++ +D+
Subjt:  IRDETDPLWGRSLRIKIEIDV

XP_035541689.1 uncharacterized protein LOC118344688 [Juglans regia]4.5e-1332.5Show/hide
Query:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI
        M ++WN E  I   ++G N FL K  N  ++  VL   PW +D+ ++  +E KG +  +D++F     W   H LP+A   +   + +G+  G V  VD+
Subjt:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI

Query:  RDETDPLWGRSLRIKIEIDV
         DE    WG  LR+K+ I++
Subjt:  RDETDPLWGRSLRIKIEIDV

XP_035546596.1 uncharacterized protein LOC118348645 [Juglans regia]1.7e-1232.5Show/hide
Query:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI
        M ++WN E  I   ++G N FL +  N+ ++  VL   PW +D+ ++  +E KG +  +DI+F     W     LP+A   +   + +G+  G V  VD+
Subjt:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI

Query:  RDETDPLWGRSLRIKIEIDV
         DE    WG  LR+K+ ID+
Subjt:  RDETDPLWGRSLRIKIEIDV

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein8.2e-1333.33Show/hide
Query:  IWNQEHTIITN-VGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDIRDE
        IW  ++ +    +G N F  + +N   +  +LE GPW +DK +L+ +E  G     D++F+YV  W   H LP AC  R     +G L+G V+++D   E
Subjt:  IWNQEHTIITN-VGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDIRDE

Query:  TDPLWGRSLRIKIEIDV
        +    G+ +RI++ IDV
Subjt:  TDPLWGRSLRIKIEIDV

A0A5C7IMZ7 DUF4283 domain-containing protein1.7e-1333.33Show/hide
Query:  MPKIW-NQEHTIITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI
        MPKIW   +   I  +  NTF    KN + +  +L  GPW +DKA+L+  EPKG   ++D+ F  V+ W   H++P  C T     ++G+++G V+++D 
Subjt:  MPKIW-NQEHTIITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI

Query:  RDETDPLWGRSLRIKIEIDV
            D + G+ +R+++ ID+
Subjt:  RDETDPLWGRSLRIKIEIDV

A0A6J1DX30 uncharacterized protein LOC1110248744.8e-1329.75Show/hide
Query:  MPKIWNQEHTI--ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVD
        M   W  E+    + ++G+N FL     A  +  + + GPW +D+ ++L  +P   I   +++F  + IW  F  LP  C TR     +G+ LG  E+ D
Subjt:  MPKIWNQEHTI--ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVD

Query:  IRDETDPLWGRSLRIKIEIDV
          D+ +P WG +LR+++ +D+
Subjt:  IRDETDPLWGRSLRIKIEIDV

A0A6P9E2G0 uncharacterized protein LOC1183446882.2e-1332.5Show/hide
Query:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI
        M ++WN E  I   ++G N FL K  N  ++  VL   PW +D+ ++  +E KG +  +D++F     W   H LP+A   +   + +G+  G V  VD+
Subjt:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI

Query:  RDETDPLWGRSLRIKIEIDV
         DE    WG  LR+K+ I++
Subjt:  RDETDPLWGRSLRIKIEIDV

A0A6P9EGW2 uncharacterized protein LOC1183486458.2e-1332.5Show/hide
Query:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI
        M ++WN E  I   ++G N FL +  N+ ++  VL   PW +D+ ++  +E KG +  +DI+F     W     LP+A   +   + +G+  G V  VD+
Subjt:  MPKIWNQEHTI-ITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDI

Query:  RDETDPLWGRSLRIKIEIDV
         DE    WG  LR+K+ ID+
Subjt:  RDETDPLWGRSLRIKIEIDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAAATTTGGAATCAGGAGCATACAATCATTACCAACGTGGGTTTCAACACTTTTTTGTGCAAATTAAAAAACGCTAGGATCAAAGGATGGGTCCTGGAAATAGG
ACCATGGTTCTATGACAAAGCAATGTTACTATTCAAGGAACCTAAAGGCGGCATCTGCAGTGAAGATATAGAGTTCAAGTATGTTTCTATTTGGACTCATTTTCATAAAC
TCCCTTATGCTTGTTTTACCAGGGCAGCGGTAGATTCAATTGGTAGTCTGCTAGGAAACGTGGAAAAAGTTGATATTCGGGATGAAACAGATCCGTTGTGGGGAAGATCA
TTGAGGATTAAAATCGAAATTGACGTACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAAATTTGGAATCAGGAGCATACAATCATTACCAACGTGGGTTTCAACACTTTTTTGTGCAAATTAAAAAACGCTAGGATCAAAGGATGGGTCCTGGAAATAGG
ACCATGGTTCTATGACAAAGCAATGTTACTATTCAAGGAACCTAAAGGCGGCATCTGCAGTGAAGATATAGAGTTCAAGTATGTTTCTATTTGGACTCATTTTCATAAAC
TCCCTTATGCTTGTTTTACCAGGGCAGCGGTAGATTCAATTGGTAGTCTGCTAGGAAACGTGGAAAAAGTTGATATTCGGGATGAAACAGATCCGTTGTGGGGAAGATCA
TTGAGGATTAAAATCGAAATTGACGTACAGTGA
Protein sequenceShow/hide protein sequence
MPKIWNQEHTIITNVGFNTFLCKLKNARIKGWVLEIGPWFYDKAMLLFKEPKGGICSEDIEFKYVSIWTHFHKLPYACFTRAAVDSIGSLLGNVEKVDIRDETDPLWGRS
LRIKIEIDVQ