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Lag0015535 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015535
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr12:15424859..15428513
RNA-Seq ExpressionLag0015535
SyntenyLag0015535
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049822.1 reverse transcriptase [Cucumis melo var. makuwa]2.2e-0758.93Show/hide
Query:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSL----KCPTHRV
        GESGQ ADSI L FWGQDRVG W   TQ+GIHSFP LG     +L    + P HR+
Subjt:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSL----KCPTHRV
TYK08698.1 reverse transcriptase [Cucumis melo var. makuwa]8.4e-0776.32Show/hide
Query:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLG
        GESGQ ADSI L FWGQDRVG W   TQ+GIHSFP LG
Subjt:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLG
TYK30754.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-0657.45Show/hide
Query:  MGESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSLK
        +G+SGQ ADSICL FW + + G  ++ TQ+GIHSFP LG+VD+  LK
Subjt:  MGESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSLK
TrEMBL top hitse value%identityAlignment
A0A5A7T0G5 Gag/pol protein5.5e-0455.81Show/hide
Query:  ESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESS
        ESGQ ADSICL FW +   G  ++ TQ+GIHSFP LG +   S
Subjt:  ESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESS
A0A5A7U202 Reverse transcriptase1.1e-0758.93Show/hide
Query:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSL----KCPTHRV
        GESGQ ADSI L FWGQDRVG W   TQ+GIHSFP LG     +L    + P HR+
Subjt:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSL----KCPTHRV
A0A5D3CBX3 Reverse transcriptase4.1e-0776.32Show/hide
Query:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLG
        GESGQ ADSI L FWGQDRVG W   TQ+GIHSFP LG
Subjt:  GESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLG
A0A5D3E4C4 Gag/pol protein3.4e-0657.45Show/hide
Query:  MGESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSLK
        +G+SGQ ADSICL FW + + G  ++ TQ+GIHSFP LG+VD+  LK
Subjt:  MGESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACT
TCTAGGAGAAGTAGATGAAAGTTCCCTTAAGTGCCCAACCCACCGTGTCACCGTCGTCGGAGTTGCAGTGTCACCGCCTAGCTCGAGCCACACTGTCGCTCTATCTGTCT
GTCTCTCCCTCGTTCGTCTTCTCCGTTGGCAGCTAGAGGCTCGTGGAATTCGTCTCTTGCACGTCGGCATCGTCTCTCGCAGCGTCGCATCCTTGCACGCAAACTATTCG
GCAAGCAGTGAGTTTGATCTTCTATTCCTCTTGTTCTCGGGCATACTAGAGAATAGAATGCCGTCTTGGACACGAAATCATCCTCGTCTCGTGACCCATCATCTGTTTGG
CCTTAAATCGAACACCCATTGTCTAGGGACTCCAAACAAGTGGTTTCAAGTCCCTTTGTTTGTTGGACAGCACGTGTTCGAGGTTAATCGCTTGTTGAACGGTAAATTCC
AGCACCTTTTCGTTTCCTTTATCAAGAATTTTAGGTGCCTCAGGTACAAATGGTCGAGGGGTGGTATGTCACCGATGGATTTAAGGGGAGCATCGAAGCCTTGGGTACAA
ATGGTCAAGGGTCGGTGTGATGAGCCTATGAAAGCAAGTATTGGATGCCTAGGAAAGGGCCAATATGTTGCTAGACATCGAGGCCTTGGGTACAAATGGCCAAGGGTCGA
TGCAACAGTTCGAGGCCTTGGGTACAAATGGTCAAGGGTCGAACACCGAGCTCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACT
TCTAGGAGAAGTAGATGAAAGTTCCCTTAAGTGCCCAACCCACCGTGTCACCGTCGTCGGAGTTGCAGTGTCACCGCCTAGCTCGAGCCACACTGTCGCTCTATCTGTCT
GTCTCTCCCTCGTTCGTCTTCTCCGTTGGCAGCTAGAGGCTCGTGGAATTCGTCTCTTGCACGTCGGCATCGTCTCTCGCAGCGTCGCATCCTTGCACGCAAACTATTCG
GCAAGCAGTGAGTTTGATCTTCTATTCCTCTTGTTCTCGGGCATACTAGAGAATAGAATGCCGTCTTGGACACGAAATCATCCTCGTCTCGTGACCCATCATCTGTTTGG
CCTTAAATCGAACACCCATTGTCTAGGGACTCCAAACAAGTGGTTTCAAGTCCCTTTGTTTGTTGGACAGCACGTGTTCGAGGTTAATCGCTTGTTGAACGGTAAATTCC
AGCACCTTTTCGTTTCCTTTATCAAGAATTTTAGGTGCCTCAGGTACAAATGGTCGAGGGGTGGTATGTCACCGATGGATTTAAGGGGAGCATCGAAGCCTTGGGTACAA
ATGGTCAAGGGTCGGTGTGATGAGCCTATGAAAGCAAGTATTGGATGCCTAGGAAAGGGCCAATATGTTGCTAGACATCGAGGCCTTGGGTACAAATGGCCAAGGGTCGA
TGCAACAGTTCGAGGCCTTGGGTACAAATGGTCAAGGGTCGAACACCGAGCTCCGTAG
Protein sequenceShow/hide protein sequence
MGESGQYADSICLPFWGQDRVGGWDMTTQEGIHSFPLLGEVDESSLKCPTHRVTVVGVAVSPPSSSHTVALSVCLSLVRLLRWQLEARGIRLLHVGIVSRSVASLHANYS
ASSEFDLLFLLFSGILENRMPSWTRNHPRLVTHHLFGLKSNTHCLGTPNKWFQVPLFVGQHVFEVNRLLNGKFQHLFVSFIKNFRCLRYKWSRGGMSPMDLRGASKPWVQ
MVKGRCDEPMKASIGCLGKGQYVARHRGLGYKWPRVDATVRGLGYKWSRVEHRAP