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Lag0015541 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015541
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSuccinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial
Genome locationchr12:15580301..15584798
RNA-Seq ExpressionLag0015541
SyntenyLag0015541
Gene Ontology termsGO:0006099 - tricarboxylic acid cycle (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009361 - succinate-CoA ligase complex (ADP-forming) (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0004775 - succinate-CoA ligase (ADP-forming) activity (molecular function)
GO:0004776 - succinate-CoA ligase (GDP-forming) activity (molecular function)
InterPro domainsIPR005811 - ATP-citrate lyase/succinyl-CoA ligase
IPR016102 - Succinyl-CoA synthetase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6418589.1 hypothetical protein SASPL_120793 [Salvia splendens]7.7e-2275.95Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSD-KLCLSLELGSFV
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KFLVDPQTEGIVLIGEI GTA+ED AALIK  D  L +S  L  F+
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSD-KLCLSLELGSFV

KMZ72542.1 Succinate--CoA ligase (ADP-forming) [Zostera marina]1.0e-2188.89Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+KKFLVDPQTEGIVLIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

TXG51810.1 hypothetical protein EZV62_024334 [Acer yangbiense]7.7e-2287.69Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGIVLIGEI GTA+ED AALIK S
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS

XP_009606229.1 succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial-like [Nicotiana tomentosiformis]7.7e-2265.52Show/hide
Query:  YAVLGADSSVWGSFPLIFRRFLQWVFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        +++LG++S+ +     +  R +  VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF+ DPQTEGIVLIGEI GTA+ED AALIK
Subjt:  YAVLGADSSVWGSFPLIFRRFLQWVFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

XP_031258001.1 succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [Pistacia vera]7.7e-2287.69Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGIVLIGEI GTA+ED AALIK S
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS

TrEMBL top hitse value%identityAlignment
A0A0K9PWA8 Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial4.9e-2288.89Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+KKFLVDPQTEGIVLIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

A0A2P5ABW6 Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial6.4e-2278.38Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSDKLCLSLEL
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGI+LIGEI GTA+ED AALIK   +  LS  L
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSDKLCLSLEL

A0A4D8Z469 Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial3.7e-2275.95Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSD-KLCLSLELGSFV
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KFLVDPQTEGIVLIGEI GTA+ED AALIK  D  L +S  L  F+
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSD-KLCLSLELGSFV

A0A5C7H478 Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial3.7e-2287.69Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDCI+KFLVDPQTEGIVLIGEI GTA+ED AALIK S
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS

A0A6A6N8Y7 Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial6.4e-2287.3Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+KKFLVDPQTEGI+LIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

SwissProt top hitse value%identityAlignment
P68209 Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial5.0e-2484.62Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AALIK S
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS

Q6DQL1 Succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial4.2e-2382.54Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC+++F+ DPQTEGIVLIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

Q6ZL94 Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial4.7e-2280.95Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF+ DPQTEGIVLIGEI GTA+ED AA I+
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

Q8GTQ9 Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial1.9e-2384.13Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF+ DPQTEGIVLIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

Q8LAD2 Succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial1.1e-2385.71Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

Arabidopsis top hitse value%identityAlignment
AT5G08300.1 Succinyl-CoA ligase, alpha subunit3.6e-2584.62Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AALIK S
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCS

AT5G23250.1 Succinyl-CoA ligase, alpha subunit7.9e-2585.71Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

AT5G23250.2 Succinyl-CoA ligase, alpha subunit7.9e-2585.71Show/hide
Query:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK
        VFQT   VGLGQSTCVGIGGDPFNGTNFVDC++KF VDPQTEGIVLIGEI GTA+ED AALIK
Subjt:  VFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIK

AT5G51710.1 K+ efflux antiporter 55.7e-0773.53Show/hide
Query:  CSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAK
        CSDKL LSLELGSFV  VM+STT+F QHTL+Q +
Subjt:  CSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAK

AT5G51710.2 K+ efflux antiporter 55.7e-0773.53Show/hide
Query:  CSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAK
        CSDKL LSLELGSFV  VM+STT+F QHTL+Q +
Subjt:  CSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCAAGAACACCAATTTGACTGGATACCACCAAAAAGTCTTCCCAGCCGTCCAAGCCCTTCTTCCAGCCGTTTTCTTCTTCTTAGTTTCATCCAACCAGCCGTG
CGCCACCATACCTTCAAGCCCCGACCACCACTTTGCAACCAGCATTCTCCGGCGAGCAGCTGCGGCGTTTCCGGCGTGCACAGGTCTTCGACGCGAGCGGCACAAAAACA
GATCGTTTCGGGCTCGAAGAAGGCTGTTTTTACATCTTTCCGGTGACTATGCAGTGTTGGGCGCGGACAGCAGCGTTTGGGGATCGTTTCCTCTGATTTTCCGGCGTTTT
TTGCAGTGGGTTTTCCAAACAATTATTGTTGTTGGCCTTGGACAATCCACATGCGTAGGTATTGGAGGAGATCCCTTTAATGGGACAAACTTTGTTGATTGCATCAAGAA
GTTCCTTGTTGATCCTCAGACAGAAGGGATTGTTCTAATTGGAGAAATAAGTGGAACTGCGAAAGAGGATGATGCTGCTTTGATAAAGTGCAGTGATAAGTTGTGCCTCA
GTCTTGAGTTGGGTTCCTTTGTAGTTAGAGTTATGATATCTACCACTGACTTCAATCAACATACTTTAGATCAGGCCAAAACCAAAGCAAAGGCAAAGGAAGCTGCTCAA
AGGCTGCTAAGTGATCGTTTTGAGTTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGCAAGAACACCAATTTGACTGGATACCACCAAAAAGTCTTCCCAGCCGTCCAAGCCCTTCTTCCAGCCGTTTTCTTCTTCTTAGTTTCATCCAACCAGCCGTG
CGCCACCATACCTTCAAGCCCCGACCACCACTTTGCAACCAGCATTCTCCGGCGAGCAGCTGCGGCGTTTCCGGCGTGCACAGGTCTTCGACGCGAGCGGCACAAAAACA
GATCGTTTCGGGCTCGAAGAAGGCTGTTTTTACATCTTTCCGGTGACTATGCAGTGTTGGGCGCGGACAGCAGCGTTTGGGGATCGTTTCCTCTGATTTTCCGGCGTTTT
TTGCAGTGGGTTTTCCAAACAATTATTGTTGTTGGCCTTGGACAATCCACATGCGTAGGTATTGGAGGAGATCCCTTTAATGGGACAAACTTTGTTGATTGCATCAAGAA
GTTCCTTGTTGATCCTCAGACAGAAGGGATTGTTCTAATTGGAGAAATAAGTGGAACTGCGAAAGAGGATGATGCTGCTTTGATAAAGTGCAGTGATAAGTTGTGCCTCA
GTCTTGAGTTGGGTTCCTTTGTAGTTAGAGTTATGATATCTACCACTGACTTCAATCAACATACTTTAGATCAGGCCAAAACCAAAGCAAAGGCAAAGGAAGCTGCTCAA
AGGCTGCTAAGTGATCGTTTTGAGTTTAGATGA
Protein sequenceShow/hide protein sequence
MISKNTNLTGYHQKVFPAVQALLPAVFFFLVSSNQPCATIPSSPDHHFATSILRRAAAAFPACTGLRRERHKNRSFRARRRLFLHLSGDYAVLGADSSVWGSFPLIFRRF
LQWVFQTIIVVGLGQSTCVGIGGDPFNGTNFVDCIKKFLVDPQTEGIVLIGEISGTAKEDDAALIKCSDKLCLSLELGSFVVRVMISTTDFNQHTLDQAKTKAKAKEAAQ
RLLSDRFEFR