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Lag0015551 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015551
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr12:15859509..15860027
RNA-Seq ExpressionLag0015551
SyntenyLag0015551
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA97040.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]4.0e-2334.44Show/hide
Query:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI
        + K V +LL   G W+ + V+  FLP+DAD+ILK+        D + WH D  G+F+V+SAY LA+ ++  D++  +       +W  IW   +  + K+
Subjt:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI

Query:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
        F W+  NN L   +N +K+ ++ +  C +C N  E V H L RC  A  LW
Subjt:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

EEC81552.1 hypothetical protein OsI_24974 [Oryza sativa Indica Group]4.0e-2334.44Show/hide
Query:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI
        + K V +LL   G W+ + V+  FLP+DAD+ILK+        D + WH D  G+F+V+SAY LA+ ++  D++  +       +W  IW   +  + K+
Subjt:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI

Query:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
        F W+  NN L   +N +K+ ++ +  C +C N  E V H L RC  A  LW
Subjt:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

EEC83784.1 hypothetical protein OsI_29682 [Oryza sativa Indica Group]4.4e-2236.77Show/hide
Query:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRL---SSLWKAIWNKKIYPR
        + K V +LLD+   WNE+LV + FLP+DAD IL +        D + WH +  G FTVK+AY LA+   +  K   A  S +    SLW  IW+  + P+
Subjt:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRL---SSLWKAIWNKKIYPR

Query:  AKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLWA
         +IF W+V ++ L    N + + ++    C LC    E+  H L RC  A+ LWA
Subjt:  AKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLWA

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]6.2e-2436.6Show/hide
Query:  ELKAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRA
        +LK   V EL    G WN EL+   FLP DA  IL +PR++    D + WH D +G +TV+S Y +A+ +    K  G+ S +LS  W+ +W   I  + 
Subjt:  ELKAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRA

Query:  KIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
        KIF WK  N  LP    + ++ +D    C +C +  ES+ H+LW C  A ++W
Subjt:  KIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

XP_030936391.1 uncharacterized protein LOC115961572 [Quercus lobata]2.6e-2237.84Show/hide
Query:  RVIELLDSQ-GLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVR-INIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIF
        RV +LLDS+ G W  E++   FLP +AD I  +P       D++IW E P G FTV+SAY LAV  +++ +K   +D+S++ S W+ +W+  +  + + F
Subjt:  RVIELLDSQ-GLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVR-INIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIF

Query:  LWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKK
        +W+   NALP   N+ ++ I  +  C  C+   ESV HVLW C+ A++
Subjt:  LWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKK

TrEMBL top hitse value%identityAlignment
A0A2H5Q8Y3 Uncharacterized protein4.8e-2238.1Show/hide
Query:  VIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWK
        V EL++ +  W+EEL+   F  +DAD I ++P       DE+IWH    G++TVKS Y  A  +NIR  A  + S    + W  IW+  +  + +IF+W+
Subjt:  VIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWK

Query:  VVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
           N LP D+N+ K+ I     C LC+   E+V H L  CK AKK+W
Subjt:  VVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

A0A2N9EWI8 Uncharacterized protein2.1e-2234.64Show/hide
Query:  WNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWKVVNNALPMDQ
        WN  L+ E FLP D + I+K+P    +  D ++W    KG FTV+SAY++ +  ++ D+A  + S  LS  W+ +W+ +  P+ K+F+W+   N LP   
Subjt:  WNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWKVVNNALPMDQ

Query:  NVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW-AYFIPISCSLLSLCS
         +  +GI  +  C  C    E+V+HVLW C+ A+K+W A  + +S  + S  S
Subjt:  NVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW-AYFIPISCSLLSLCS

A0A803PUL2 Uncharacterized protein2.1e-2235.37Show/hide
Query:  VIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWK
        V  L+  +  WN  L+ + F P+D D IL +P     + D++IWH    G FTV+SAY+LA   ++ D+   + S+   + WK  W+ ++  + KIF W+
Subjt:  VIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWK

Query:  VVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
         +++ALP+  ++ ++ I T+S C +C+ A ES  H L+ CK AK +W
Subjt:  VVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

B8B7F1 zf-RVT domain-containing protein1.9e-2334.44Show/hide
Query:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI
        + K V +LL   G W+ + V+  FLP+DAD+ILK+        D + WH D  G+F+V+SAY LA+ ++  D++  +       +W  IW   +  + K+
Subjt:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI

Query:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
        F W+  NN L   +N +K+ ++ +  C +C N  E V H L RC  A  LW
Subjt:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

Q2QUC2 Retrotransposon protein, putative, unclassified1.9e-2334.44Show/hide
Query:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI
        + K V +LL   G W+ + V+  FLP+DAD+ILK+        D + WH D  G+F+V+SAY LA+ ++  D++  +       +W  IW   +  + K+
Subjt:  KAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKI

Query:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
        F W+  NN L   +N +K+ ++ +  C +C N  E V H L RC  A  LW
Subjt:  FLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657509.9e-0924.78Show/hide
Query:  DEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWR
        D + W     G+F+V+SAY +     +           ++S +  +W  ++  R K FLW V N A+  ++   ++ +  ++ C +C+   ES+ HVL  
Subjt:  DEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWR

Query:  CKIAKKLWAYFIP
        C     +W   +P
Subjt:  CKIAKKLWAYFIP

Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein2.0e-0433.93Show/hide
Query:  PRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
        P+ K+FLWK    ALP+   + ++ I +   C  C  A E+  H+L+ C  A ++W
Subjt:  PRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

AT3G09510.1 Ribonuclease H-like superfamily protein2.0e-1225.32Show/hide
Query:  EELKAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPR
        +E+    + E   S   W++  +++     D   I ++    +K  D+IIW+ +  G +TV+S Y L       +            L   IWN  I P+
Subjt:  EELKAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPR

Query:  AKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
         K FLW+ ++ AL   + +  +G+  +  C  C    ES+ H L+ C  A   W
Subjt:  AKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

AT3G25270.1 Ribonuclease H-like superfamily protein6.2e-0631.75Show/hide
Query:  IWNKKIYPRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW
        IW  K  P+ K FLWK+++ AL    N++++ I  +  C  C    E+ +H+ + C  A+++W
Subjt:  IWNKKIYPRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLW

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.6e-0836.07Show/hide
Query:  IWNKKIYPRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKK
        IW+ KI P+ K+ +WK +NNALP+   +  + I     C  CR+  E++ H+L+ C  A++
Subjt:  IWNKKIYPRAKIFLWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKK

AT4G29090.1 Ribonuclease H-like superfamily protein1.9e-1527.81Show/hide
Query:  RVIELLDSQGL-WNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVR-INIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIF
        +V +L+D  G  W ++++   F  V+   I ++     +  D   W     G +TVKS Y +  + IN R          L+ +++ IW  +  P+ + F
Subjt:  RVIELLDSQGL-WNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVR-INIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIF

Query:  LWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLWA
        LWK ++N+LP+   +  + +   S C+ C + KE+V H+L++C  A+  WA
Subjt:  LWKVVNNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLWA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCTAAAAGCAAAAAGAGTTATCGAGCTACTTGACAGCCAGGGGCTTTGGAATGAAGAGCTTGTGACGGAGGGGTTTCTTCCTGTGGATGCTGACGATATCCT
TAAGATGCCTAGGATCAACAACAAAAATGGGGATGAGATTATCTGGCACGAGGATCCTAAAGGTCGATTCACGGTGAAGAGTGCTTATAACTTGGCAGTGAGGATTAACA
TCAGGGATAAAGCCTTTGGGGCGGATAGCTCTCGCCTTTCTTCACTTTGGAAGGCAATTTGGAATAAAAAGATATATCCTAGAGCTAAAATTTTTCTTTGGAAAGTTGTA
AACAACGCTTTGCCCATGGACCAAAACGTTCAGAAGAAGGGAATTGATACTAATTCGTGTTGTCTTTTGTGCAGGAATGCGAAGGAATCGGTGGAACACGTCCTTTGGAG
GTGTAAGATTGCAAAAAAGCTTTGGGCCTATTTTATCCCTATTTCCTGTTCCCTTCTTTCTTTGTGTAGCGATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGCTAAAAGCAAAAAGAGTTATCGAGCTACTTGACAGCCAGGGGCTTTGGAATGAAGAGCTTGTGACGGAGGGGTTTCTTCCTGTGGATGCTGACGATATCCT
TAAGATGCCTAGGATCAACAACAAAAATGGGGATGAGATTATCTGGCACGAGGATCCTAAAGGTCGATTCACGGTGAAGAGTGCTTATAACTTGGCAGTGAGGATTAACA
TCAGGGATAAAGCCTTTGGGGCGGATAGCTCTCGCCTTTCTTCACTTTGGAAGGCAATTTGGAATAAAAAGATATATCCTAGAGCTAAAATTTTTCTTTGGAAAGTTGTA
AACAACGCTTTGCCCATGGACCAAAACGTTCAGAAGAAGGGAATTGATACTAATTCGTGTTGTCTTTTGTGCAGGAATGCGAAGGAATCGGTGGAACACGTCCTTTGGAG
GTGTAAGATTGCAAAAAAGCTTTGGGCCTATTTTATCCCTATTTCCTGTTCCCTTCTTTCTTTGTGTAGCGATGGTTAG
Protein sequenceShow/hide protein sequence
MEELKAKRVIELLDSQGLWNEELVTEGFLPVDADDILKMPRINNKNGDEIIWHEDPKGRFTVKSAYNLAVRINIRDKAFGADSSRLSSLWKAIWNKKIYPRAKIFLWKVV
NNALPMDQNVQKKGIDTNSCCLLCRNAKESVEHVLWRCKIAKKLWAYFIPISCSLLSLCSDG