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Lag0015570 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015570
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAt-rich interactive domain-containing protein
Genome locationchr12:16490550..16492327
RNA-Seq ExpressionLag0015570
SyntenyLag0015570
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR042293 - AT-rich interactive domain-containing protein 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575416.1 AT-rich interactive domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]5.4e-15100Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
KAG7013957.1 AT-rich interactive domain-containing protein 4 [Cucurbita argyrosperma subsp. argyrosperma]5.4e-15100Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
XP_022953795.1 AT-rich interactive domain-containing protein 4-like [Cucurbita moschata]5.4e-15100Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
XP_022992125.1 AT-rich interactive domain-containing protein 4-like [Cucurbita maxima]5.4e-15100Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
XP_023548213.1 AT-rich interactive domain-containing protein 4-like [Cucurbita pepo subsp. pepo]5.4e-15100Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
TrEMBL top hitse value%identityAlignment
A0A1S3CGG2 AT-rich interactive domain-containing protein 4-like1.7e-1495.12Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTF+CY ACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
A0A5A7V0V7 AT-rich interactive domain-containing protein 4-like1.7e-1495.12Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTF+CY ACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
A0A5D3BXU1 AT-rich interactive domain-containing protein 4-like1.7e-1495.12Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTF+CY ACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
A0A6J1GPB6 AT-rich interactive domain-containing protein 4-like2.6e-15100Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
A0A6J1JUU6 AT-rich interactive domain-containing protein 4-like2.6e-15100Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
SwissProt top hitse value%identityAlignment
Q6NQ79 AT-rich interactive domain-containing protein 41.7e-0858.54Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        G+ YVIYW++ FS YAACHFR++  SV+QSS + TWD F +
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
Arabidopsis top hitse value%identityAlignment
AT1G56310.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-0556.1Show/hide
Query:  QLEYAALDAVVLVHIFQHVRDQSQPSTTAEGQKRLEWKSFI
        QLEYAALDA VL+HIF+HVRD     +++E     +WKS I
Subjt:  QLEYAALDAVVLVHIFQHVRDQSQPSTTAEGQKRLEWKSFI
AT3G43240.1 ARID/BRIGHT DNA-binding domain-containing protein1.2e-0958.54Show/hide
Query:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL
        G+ YVIYW++ FS YAACHFR++  SV+QSS + TWD F +
Subjt:  GIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTAGAATATGCGGCTCTTGATGCTGTTGTGCTCGTCCATATCTTCCAACATGTTCGAGATCAGTCACAGCCATCTACAACAGCAGAGGGGCAAAAACGACT
CGAGTGGAAATCTTTTATTGGTATTCCTTATGTCATATATTGGAGAAGCACATTTTCTTGTTATGCAGCATGTCATTTCCGTAATGCATTCCTTTCGGTTCTTCAGAGTT
CATCTGCTCATACATGGGACGCATTTCAACTTGTTTTCTTGAAACCTGCAGACGTGTTTCGTGCGCCACTGAAGGTGTTTTTTCTTGTAGTGTTAGTTGCATCACAACAA
GCCACAATTGAAGAAATTTCAAGAAGGTTGACAAGTGGAGAAGGTTCATCGTCTAATGTGGAAAGGACTCCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTAGAATATGCGGCTCTTGATGCTGTTGTGCTCGTCCATATCTTCCAACATGTTCGAGATCAGTCACAGCCATCTACAACAGCAGAGGGGCAAAAACGACT
CGAGTGGAAATCTTTTATTGGTATTCCTTATGTCATATATTGGAGAAGCACATTTTCTTGTTATGCAGCATGTCATTTCCGTAATGCATTCCTTTCGGTTCTTCAGAGTT
CATCTGCTCATACATGGGACGCATTTCAACTTGTTTTCTTGAAACCTGCAGACGTGTTTCGTGCGCCACTGAAGGTGTTTTTTCTTGTAGTGTTAGTTGCATCACAACAA
GCCACAATTGAAGAAATTTCAAGAAGGTTGACAAGTGGAGAAGGTTCATCGTCTAATGTGGAAAGGACTCCAGAATAG
Protein sequenceShow/hide protein sequence
MLQLEYAALDAVVLVHIFQHVRDQSQPSTTAEGQKRLEWKSFIGIPYVIYWRSTFSCYAACHFRNAFLSVLQSSSAHTWDAFQLVFLKPADVFRAPLKVFFLVVLVASQQ
ATIEEISRRLTSGEGSSSNVERTPE