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Lag0015576 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015576
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:16795973..16796685
RNA-Seq ExpressionLag0015576
SyntenyLag0015576
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021749920.1 uncharacterized protein LOC110715641 [Chenopodium quinoa]9.0e-2033.19Show/hide
Query:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDF----------------RNTT--KEIGSLLGKVEQIDLEDEKEQHWSRSL
        I  +  NLF+ +F N + K++I+   PWFFD  +LL++E   D    E  F                RN +  +E+G  LG   +ID  D     W   +
Subjt:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDF----------------RNTT--KEIGSLLGKVEQIDLEDEKEQHWSRSL

Query:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKEC-----EDECGTKEEYLPYGPWLR-EPTKLVNYNYVPPDRADFFGRGR
         +K+ VEV+ PL+RG+FL +   G  KW+ + YE+LSDF + CG+L HT KEC     ED+  T+  Y  YGPWLR  P K+        ++        
Subjt:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKEC-----EDECGTKEEYLPYGPWLR-EPTKLVNYNYVPPDRADFFGRGR

Query:  GRGRDGGRGSWRQASFEE----GVAATPGFLSDPV
        G  + GG  S+   S  +      A    FLS P+
Subjt:  GRGRDGGRGSWRQASFEE----GVAATPGFLSDPV

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.0e-1931.4Show/hide
Query:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT------------------KEIGSLLGKVEQIDLEDEKEQHWSRSL
        +D +GFN+FL  F  +  +++I+  GPW FD+A+++++ P + +   + DFRN +                    +G+ +G  E ++  +     W   L
Subjt:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT------------------KEIGSLLGKVEQIDLEDEKEQHWSRSL

Query:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDEC-GTKEEYLPYGPWLR
         ++++ +V  PL RGI L  +      WI + YE+L DF Y CG L H +K+C D C  +  + L YGPWLR
Subjt:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDEC-GTKEEYLPYGPWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]9.0e-2033.33Show/hide
Query:  VGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADS---------CGEETDFRNTTKE---------IGSLLGKVEQIDLEDEKEQHWSRSLI-M
        +G N+++  F++   KS+++ +GPW F+K++L++  P A +         C       N   E         +G+ LG VE+I  E +    W+   I +
Subjt:  VGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADS---------CGEETDFRNTTKE---------IGSLLGKVEQIDLEDEKEQHWSRSLI-M

Query:  KIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLP--YGPWLREPTKLVNYNYVPPDRADFFGRGR-GRGRD
        +++++V  PL+RGI LK+   G D W  L YEKL DF Y CG +GH+ +ECE          P  YG WLR    L+  +   P+   F+  GR GRG  
Subjt:  KIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLP--YGPWLREPTKLVNYNYVPPDRADFFGRGR-GRGRD

Query:  -----GGRGSWRQ
             GGRG WR+
Subjt:  -----GGRGSWRQ

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]3.4e-1930.99Show/hide
Query:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT------------------KEIGSLLGKVEQIDLEDEKEQHWSRSL
        ++ +G N+F+ KF +   K ++   GPW FD+A+++++EPK     ++  F + +                  +E+GS +GKVE I + D + + +   +
Subjt:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT------------------KEIGSLLGKVEQIDLEDEKEQHWSRSL

Query:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLR
         +++ V +  PLK+ I LK E    D  + + YE+L DF + CG +GH  +EC +  G ++E LP+GPWL+
Subjt:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLR

XP_024035600.1 uncharacterized protein LOC112096408 [Citrus clementina]1.5e-1932.57Show/hide
Query:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDF------------------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSL
        ++ +G N+FL KF +   K +I+  GPW FD++++++ EP      ++ DF                  +   +EIG  +GKV++++ +D  E   S  +
Subjt:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDF------------------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSL

Query:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLREPTK
         ++I V V  PL + + LK E RG    +++ YEKL DF + CGL+GH  +EC D  G  ++ L YG W+R  T+
Subjt:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLREPTK

TrEMBL top hitse value%identityAlignment
A0A5C7H466 CCHC-type domain-containing protein1.4e-1828.57Show/hide
Query:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPK-----ADSCGEETDF-------------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSL
        I+ V  N+FL KF N + +++I + GPW+FDK+++++ +P+     +  C    +              R   K +   +G+V  +D+  E    W + L
Subjt:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPK-----ADSCGEETDF-------------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSL

Query:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEY----LPYGPWLREP-TKLVNYNYVPPDRAD------F
         +K+Q+++  PLKR + L+ E+      + L YE+L +F Y CG +GH  K+CED    +E        +G W+R P       N + P          F
Subjt:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEY----LPYGPWLREP-TKLVNYNYVPPDRAD------F

Query:  FGRGRGRGRD
         GR  G+G+D
Subjt:  FGRGRGRGRD

A0A5C7HBM7 CCHC-type domain-containing protein5.3e-1832.77Show/hide
Query:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEP------------KADSCGEETDF------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSL
        I+ V  N+FL  F   + ++K+ + GPW FDK +L++E+P            KAD   +  D       R T K +   +G+V  I++  +    W + L
Subjt:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEP------------KADSCGEETDF------RNTTKEIGSLLGKVEQIDLEDEKEQHWSRSL

Query:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEY----LPYGPWLREP
         +K+++++  PLKR + L  ++ G    + L YE+L +F Y CG LGH I EC D    KE      L +GPW+R P
Subjt:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEY----LPYGPWLREP

A0A6J1BSZ1 uncharacterized protein LOC1110054819.7e-2031.4Show/hide
Query:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT------------------KEIGSLLGKVEQIDLEDEKEQHWSRSL
        +D +GFN+FL  F  +  +++I+  GPW FD+A+++++ P + +   + DFRN +                    +G+ +G  E ++  +     W   L
Subjt:  IDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTT------------------KEIGSLLGKVEQIDLEDEKEQHWSRSL

Query:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDEC-GTKEEYLPYGPWLR
         ++++ +V  PL RGI L  +      WI + YE+L DF Y CG L H +K+C D C  +  + L YGPWLR
Subjt:  IMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDEC-GTKEEYLPYGPWLR

A0A6J1D765 uncharacterized protein LOC1110179024.3e-2033.33Show/hide
Query:  VGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADS---------CGEETDFRNTTKE---------IGSLLGKVEQIDLEDEKEQHWSRSLI-M
        +G N+++  F++   KS+++ +GPW F+K++L++  P A +         C       N   E         +G+ LG VE+I  E +    W+   I +
Subjt:  VGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADS---------CGEETDFRNTTKE---------IGSLLGKVEQIDLEDEKEQHWSRSLI-M

Query:  KIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLP--YGPWLREPTKLVNYNYVPPDRADFFGRGR-GRGRD
        +++++V  PL+RGI LK+   G D W  L YEKL DF Y CG +GH+ +ECE          P  YG WLR    L+  +   P+   F+  GR GRG  
Subjt:  KIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLP--YGPWLREPTKLVNYNYVPPDRADFFGRGR-GRGRD

Query:  -----GGRGSWRQ
             GGRG WR+
Subjt:  -----GGRGSWRQ

A0A803MME0 Uncharacterized protein3.7e-1933.88Show/hide
Query:  MLIDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNT------------------TKEIGSLLGKVEQIDLEDEKEQHWSR
        M++  +  N F+ +F N   K ++++  PWFFD  +LL++E + +    E DF  T                   K IG  LG    I+L+D     W  
Subjt:  MLIDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNT------------------TKEIGSLLGKVEQIDLEDEKEQHWSR

Query:  SLIMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKEC----EDECGTKEEYLPYGPWLR-EPTKL
         +  K+ V V  PL+RG+FL + +    +WI + YE+L+DF + CG+L HT KEC    ED+   +E    YGPW+R  P KL
Subjt:  SLIMKIQVEVYSPLKRGIFLKSEKRGVDKWIKLTYEKLSDFSYGCGLLGHTIKEC----EDECGTKEEYLPYGPWLR-EPTKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATTGATTGTGTTGGTTTCAATTTGTTCTTATGCAAATTTCAAAATGCTCAAGTTAAAAGTAAAATCATTGAGAATGGACCATGGTTTTTCGATAAAGCAATGCT
CTTAATGGAGGAACCAAAAGCAGATAGCTGTGGCGAGGAAACGGATTTCAGGAACACAACAAAGGAAATTGGCAGCTTATTAGGAAAAGTGGAACAAATTGACTTAGAGG
ATGAAAAAGAGCAACACTGGAGTCGATCGTTAATAATGAAGATACAAGTTGAAGTTTATTCGCCGTTAAAGCGAGGTATTTTCCTGAAATCAGAGAAAAGGGGGGTTGAT
AAATGGATCAAACTTACTTATGAAAAACTATCGGATTTCAGTTATGGATGTGGCTTGTTGGGGCATACGATTAAAGAATGTGAAGATGAATGTGGAACCAAAGAAGAATA
CCTTCCATATGGCCCCTGGCTTAGGGAACCAACGAAATTGGTGAATTATAATTATGTTCCACCAGATAGAGCTGATTTCTTTGGGAGGGGAAGAGGACGAGGAAGAGATG
GTGGTCGAGGGAGCTGGAGGCAGGCTAGTTTTGAGGAAGGAGTTGCTGCTACACCGGGATTTTTATCAGACCCAGTAGGATACTACTGCCAGTTCTCAGCTGGAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGATTGATTGTGTTGGTTTCAATTTGTTCTTATGCAAATTTCAAAATGCTCAAGTTAAAAGTAAAATCATTGAGAATGGACCATGGTTTTTCGATAAAGCAATGCT
CTTAATGGAGGAACCAAAAGCAGATAGCTGTGGCGAGGAAACGGATTTCAGGAACACAACAAAGGAAATTGGCAGCTTATTAGGAAAAGTGGAACAAATTGACTTAGAGG
ATGAAAAAGAGCAACACTGGAGTCGATCGTTAATAATGAAGATACAAGTTGAAGTTTATTCGCCGTTAAAGCGAGGTATTTTCCTGAAATCAGAGAAAAGGGGGGTTGAT
AAATGGATCAAACTTACTTATGAAAAACTATCGGATTTCAGTTATGGATGTGGCTTGTTGGGGCATACGATTAAAGAATGTGAAGATGAATGTGGAACCAAAGAAGAATA
CCTTCCATATGGCCCCTGGCTTAGGGAACCAACGAAATTGGTGAATTATAATTATGTTCCACCAGATAGAGCTGATTTCTTTGGGAGGGGAAGAGGACGAGGAAGAGATG
GTGGTCGAGGGAGCTGGAGGCAGGCTAGTTTTGAGGAAGGAGTTGCTGCTACACCGGGATTTTTATCAGACCCAGTAGGATACTACTGCCAGTTCTCAGCTGGAATCTAG
Protein sequenceShow/hide protein sequence
MLIDCVGFNLFLCKFQNAQVKSKIIENGPWFFDKAMLLMEEPKADSCGEETDFRNTTKEIGSLLGKVEQIDLEDEKEQHWSRSLIMKIQVEVYSPLKRGIFLKSEKRGVD
KWIKLTYEKLSDFSYGCGLLGHTIKECEDECGTKEEYLPYGPWLREPTKLVNYNYVPPDRADFFGRGRGRGRDGGRGSWRQASFEEGVAATPGFLSDPVGYYCQFSAGI