; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015578 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015578
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:16798094..16798498
RNA-Seq ExpressionLag0015578
SyntenyLag0015578
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7148628.1 hypothetical protein RHSIM_Rhsim03G0080700 [Rhododendron simsii]5.0e-1336.23Show/hide
Query:  WVKYEECKGISRSVWQEG-GNMMLISIVDKNRIYLERLGNWSRYRYGGSIR---GAISKKETEIQSLARNGDVISMNMIREK---EKELEVLLEDDEIYW
        W+  EEC  +   VW +G    +++S+  K R   ERL  WSR ++ G +R    A   +  EIQ+L   G  ++ +++ E+   E+ELE L + D +YW
Subjt:  WVKYEECKGISRSVWQEG-GNMMLISIVDKNRIYLERLGNWSRYRYGGSIR---GAISKKETEIQSLARNGDVISMNMIREK---EKELEVLLEDDEIYW

Query:  RQRAREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE
         QR+R +WLQ GD+N+++FH+    RR+ N I  L D+
Subjt:  RQRAREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE

TXG57822.1 hypothetical protein EZV62_015651 [Acer yangbiense]2.9e-1338.97Show/hide
Query:  VKYEECKGISRSVWQEGGNMMLISIVDKNRIYLER----LGNWSRYRYGGSIRGAISKKETEIQSL-ARNGDVISMNMIREKEKELEVLLEDDEIYWRQR
        +K  +   +   +W+E G    I  +   +  LER    L  WSR R+ G+IR  I++K  EI++L  R  + + +  I+  E+ +E LLE DE+YW+QR
Subjt:  VKYEECKGISRSVWQEGGNMMLISIVDKNRIYLER----LGNWSRYRYGGSIRGAISKKETEIQSL-ARNGDVISMNMIREKEKELEVLLEDDEIYWRQR

Query:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDER
        +R +W   GD NTK+FH RA+ R+K N IS+L D R
Subjt:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDER

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]2.2e-1337.78Show/hide
Query:  WVKYEECKGISRSVWQEGGNMMLISIVDKN-RIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARN--GDVISMNMIREKEKELEVLLEDDEIYWRQRA
        W K E+CK I  + W  G ++     + +N RI    L  WS   Y G I   I  K + + +LA     + +S+ + R +E E+  LL+D+E YW QRA
Subjt:  WVKYEECKGISRSVWQEGGNMMLISIVDKN-RIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARN--GDVISMNMIREKEKELEVLLEDDEIYWRQRA

Query:  REEWLQWGDQNTKWFHMRANHRRKVNSISNLFDER
        +  WL+ GD+NTK+FH +A+ RRK N+I  ++DE+
Subjt:  REEWLQWGDQNTKWFHMRANHRRKVNSISNLFDER

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]1.7e-1337.5Show/hide
Query:  MWVKYEECKGISRSVWQEGGNM-MLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKET--EIQSLARNGDV-ISMNMIREKEKELEVLLEDDEIYWRQ
        MW + E+CK I + VW     +     I  + R   E L  W++  +G   R    KKET   +    RNG +   +NM+R   KE+  LL+ +EI W+Q
Subjt:  MWVKYEECKGISRSVWQEGGNM-MLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKET--EIQSLARNGDV-ISMNMIREKEKELEVLLEDDEIYWRQ

Query:  RAREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE
        R+R +WL  GD+NTK+FH +A+ RR+ N+I+ + DE
Subjt:  RAREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE

XP_023902041.1 uncharacterized protein LOC112013897 [Quercus suber]5.9e-1437.5Show/hide
Query:  MWVKYEECKGISRSVWQEGGNM-MLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKET--EIQSLARNGDV-ISMNMIREKEKELEVLLEDDEIYWRQ
        MW + E+CK I + VW     +   + I  + R   E L  W++  +G   R    KKET   +    RNG +   +NM+R   KE+  LL+ +EI W+Q
Subjt:  MWVKYEECKGISRSVWQEGGNM-MLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKET--EIQSLARNGDV-ISMNMIREKEKELEVLLEDDEIYWRQ

Query:  RAREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE
        R+R +WL  GD+NTK+FH +A+ RR+ N+I+ + DE
Subjt:  RAREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE

TrEMBL top hitse value%identityAlignment
A0A2N9FJU7 CCHC-type domain-containing protein8.3e-1437.04Show/hide
Query:  WVKYEECKGISRSVWQEGGNMM----LISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR
        W K E+CKG+    W  G +MM    +  +V+K +     L  WSR ++ GS+   I  +   +Q+L         N I E + EL  LLE++E YW QR
Subjt:  WVKYEECKGISRSVWQEGGNMM----LISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR

Query:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE
        +R  W++ GD+NTK+FH   N RR  N I  L D+
Subjt:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE

A0A2N9GPZ7 Reverse transcriptase domain-containing protein1.5e-1538.06Show/hide
Query:  MWVKYEECKGISRSVWQEG---GNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR
        MW+K E+C+ +    W +G   G+ M + +V+K ++    L  WSR R+ GS+  +I +K  ++Q L           I E + +L  LLE +EI+WRQR
Subjt:  MWVKYEECKGISRSVWQEG---GNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR

Query:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFD
        +R  W+  GD+NTK+FH + N RR+ N IS L D
Subjt:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFD

A0A2N9IDC0 Uncharacterized protein8.0e-1739.55Show/hide
Query:  MWVKYEECKGISRSVWQE---GGNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR
        MW K EEC+G+  + W +    GN M   +++K +     L  WSR ++ GS   +I  K   +Q L     +     I E + EL  LLE +EI+WRQR
Subjt:  MWVKYEECKGISRSVWQE---GGNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR

Query:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFD
        +R  W+  GD+NTK+FH + NHRR++NSI  L D
Subjt:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFD

A0A2N9IPS8 Reverse transcriptase domain-containing protein1.5e-1538.06Show/hide
Query:  MWVKYEECKGISRSVWQEG---GNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR
        MW+K E+C+ +    W +G   G+ M + +V+K ++    L  WSR R+ GS+  +I +K  ++Q L           I E + +L  LLE +EI+WRQR
Subjt:  MWVKYEECKGISRSVWQEG---GNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQR

Query:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFD
        +R  W+  GD+NTK+FH + N RR+ N IS L D
Subjt:  AREEWLQWGDQNTKWFHMRANHRRKVNSISNLFD

A0A803QGA2 Uncharacterized protein3.4e-1538.06Show/hide
Query:  MWVKYEECKGISRSVWQEGGNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGA--ISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQRA
        +W+  EECK + ++ W+   N  LIS +   +     L  W + + G   R      KK  ++ +L   G   S    R+ E +L  LL  +E++W+QRA
Subjt:  MWVKYEECKGISRSVWQEGGNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGA--ISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQRA

Query:  REEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE
        R +WLQ GDQNTK+FH +AN RRK N+I  LF+E
Subjt:  REEWLQWGDQNTKWFHMRANHRRKVNSISNLFDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTTAAATATGAGGAATGCAAGGGCATTAGTCGTAGTGTGTGGCAAGAAGGTGGAAACATGATGTTAATTTCTATTGTGGACAAAAATAGGATCTACCTTGAGAG
GCTAGGAAACTGGAGTCGATATAGGTACGGGGGGTCTATTAGAGGGGCGATCTCTAAGAAGGAAACAGAGATTCAGAGTTTAGCAAGAAATGGAGATGTGATTAGTATGA
ATATGATTCGAGAGAAGGAAAAAGAATTGGAGGTGTTATTAGAAGATGATGAAATCTACTGGCGTCAAAGAGCTCGTGAGGAGTGGTTGCAGTGGGGGGATCAGAATACG
AAATGGTTCCACATGAGGGCAAATCATCGAAGGAAAGTTAACAGTATCAGCAACTTATTTGATGAGAGGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGTTAAATATGAGGAATGCAAGGGCATTAGTCGTAGTGTGTGGCAAGAAGGTGGAAACATGATGTTAATTTCTATTGTGGACAAAAATAGGATCTACCTTGAGAG
GCTAGGAAACTGGAGTCGATATAGGTACGGGGGGTCTATTAGAGGGGCGATCTCTAAGAAGGAAACAGAGATTCAGAGTTTAGCAAGAAATGGAGATGTGATTAGTATGA
ATATGATTCGAGAGAAGGAAAAAGAATTGGAGGTGTTATTAGAAGATGATGAAATCTACTGGCGTCAAAGAGCTCGTGAGGAGTGGTTGCAGTGGGGGGATCAGAATACG
AAATGGTTCCACATGAGGGCAAATCATCGAAGGAAAGTTAACAGTATCAGCAACTTATTTGATGAGAGGAATTAG
Protein sequenceShow/hide protein sequence
MWVKYEECKGISRSVWQEGGNMMLISIVDKNRIYLERLGNWSRYRYGGSIRGAISKKETEIQSLARNGDVISMNMIREKEKELEVLLEDDEIYWRQRAREEWLQWGDQNT
KWFHMRANHRRKVNSISNLFDERN