; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015592 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015592
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHomeodomain-like superfamily protein
Genome locationchr12:17109409..17112633
RNA-Seq ExpressionLag0015592
SyntenyLag0015592
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG97729.1 Homeodomain-like superfamily protein, partial [Prunus dulcis]1.1e-3257.5Show/hide
Query:  IAGNHEFSGEFLLISLSCMIGVATVPFRITSNHGCLRRFWRLPVRFVASRSQV-TKATTASSFRIFYIPN--NERRFAFYPLLVREDLKQRQL-------
        IAGN+ FSGE + ++ S  +       R+ S+         +    VAS SQ+    TT ++  +  +    NERR  FYPLLVREDLKQR+L       
Subjt:  IAGNHEFSGEFLLISLSCMIGVATVPFRITSNHGCLRRFWRLPVRFVASRSQV-TKATTASSFRIFYIPN--NERRFAFYPLLVREDLKQRQL-------

Query:  -LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
          RKPYTITKQRERWTEEEHNRFL+ALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSK+
Subjt:  -LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

CAD5311389.1 unnamed protein product [Arabidopsis thaliana]9.6e-3266.39Show/hide
Query:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI
        HG  + FW   +R V+  S+    TTA  F  F++  ++R F FY LLVREDLKQR     RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHI
Subjt:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI

Query:  GTKTAVQIRSHAQKFFSKV
        GTKTAVQIRSHAQKFF+K+
Subjt:  GTKTAVQIRSHAQKFFSKV

CAD5311390.1 unnamed protein product [Arabidopsis thaliana]9.6e-3266.39Show/hide
Query:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI
        HG  + FW   +R V+  S+    TTA  F  F++  ++R F FY LLVREDLKQR     RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHI
Subjt:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI

Query:  GTKTAVQIRSHAQKFFSKV
        GTKTAVQIRSHAQKFF+K+
Subjt:  GTKTAVQIRSHAQKFFSKV

EXC13655.1 Protein LHY [Morus notabilis]1.1e-3873.11Show/hide
Query:  RFWRLPVRFVASRSQVTKATTASSFRIFYIP--NNERRFAFYPLLVREDLKQRQLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTA
        RFWRL VRFVA    V  +TT ++  +  +    N  +F+ YPLLVREDLKQRQL RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTA
Subjt:  RFWRLPVRFVASRSQVTKATTASSFRIFYIP--NNERRFAFYPLLVREDLKQRQLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTA

Query:  VQIRSHAQKFFSKVNGCLV
        VQIRSHAQKFFSK+N  ++
Subjt:  VQIRSHAQKFFSKVNGCLV

KAG2720670.1 hypothetical protein I3760_02G045700 [Carya illinoinensis]1.4e-3063.57Show/hide
Query:  WRLPVRFVASRSQVTKATTAS-SFRIFYIPNNERRFAFYPLLVREDLKQ---------------RQLL---RKPYTITKQRERWTEEEHNRFLEALKLYG
        WRL VRFV S  Q+   T A   F +F +   E  F+F PLL REDLKQ                +L+   RKPYTITKQRERWTEEEHNRFLEALKLYG
Subjt:  WRLPVRFVASRSQVTKATTAS-SFRIFYIPNNERRFAFYPLLVREDLKQ---------------RQLL---RKPYTITKQRERWTEEEHNRFLEALKLYG

Query:  RAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RAWQR+EEHIGTKTAVQIRSHAQKFFSK+
Subjt:  RAWQRIEEHIGTKTAVQIRSHAQKFFSKV

TrEMBL top hitse value%identityAlignment
A0A4Y1R0W5 Homeodomain-like superfamily protein (Fragment)5.5e-3357.5Show/hide
Query:  IAGNHEFSGEFLLISLSCMIGVATVPFRITSNHGCLRRFWRLPVRFVASRSQV-TKATTASSFRIFYIPN--NERRFAFYPLLVREDLKQRQL-------
        IAGN+ FSGE + ++ S  +       R+ S+         +    VAS SQ+    TT ++  +  +    NERR  FYPLLVREDLKQR+L       
Subjt:  IAGNHEFSGEFLLISLSCMIGVATVPFRITSNHGCLRRFWRLPVRFVASRSQV-TKATTASSFRIFYIPN--NERRFAFYPLLVREDLKQRQL-------

Query:  -LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
          RKPYTITKQRERWTEEEHNRFL+ALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSK+
Subjt:  -LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

A0A5C7I2D9 HTH myb-type domain-containing protein5.7e-3083.91Show/hide
Query:  NERRFAFYPLLVREDLKQRQL-------LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        NE R  FYPLLVREDLKQR L        RKPYTITKQRERWTE+EHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSK+
Subjt:  NERRFAFYPLLVREDLKQRQL-------LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

A0A7G2DP26 (thale cress) hypothetical protein4.7e-3266.39Show/hide
Query:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI
        HG  + FW   +R V+  S+    TTA  F  F++  ++R F FY LLVREDLKQR     RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHI
Subjt:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI

Query:  GTKTAVQIRSHAQKFFSKV
        GTKTAVQIRSHAQKFF+K+
Subjt:  GTKTAVQIRSHAQKFFSKV

A0A7G2DQF0 (thale cress) hypothetical protein4.7e-3266.39Show/hide
Query:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI
        HG  + FW   +R V+  S+    TTA  F  F++  ++R F FY LLVREDLKQR     RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHI
Subjt:  HGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQR--QLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHI

Query:  GTKTAVQIRSHAQKFFSKV
        GTKTAVQIRSHAQKFF+K+
Subjt:  GTKTAVQIRSHAQKFFSKV

W9S411 Protein LHY5.1e-3973.11Show/hide
Query:  RFWRLPVRFVASRSQVTKATTASSFRIFYIP--NNERRFAFYPLLVREDLKQRQLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTA
        RFWRL VRFVA    V  +TT ++  +  +    N  +F+ YPLLVREDLKQRQL RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTA
Subjt:  RFWRLPVRFVASRSQVTKATTASSFRIFYIP--NNERRFAFYPLLVREDLKQRQLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTA

Query:  VQIRSHAQKFFSKVNGCLV
        VQIRSHAQKFFSK+N  ++
Subjt:  VQIRSHAQKFFSKVNGCLV

SwissProt top hitse value%identityAlignment
A0A0G3VTN5 Protein LATE ELONGATED HYPOCOTYL1.1e-2596.55Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFF+K+
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

F4K5X6 Protein REVEILLE 25.0e-2386.21Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRE+WTE EH +F+EALKLYGRAW+RIEEH+GTKTAVQIRSHAQKFF+KV
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

F4KGY6 Protein REVEILLE 12.2e-2384.75Show/hide
Query:  LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        +RKPYTITK+RERWT+EEH +F+EALKLYGRAW+RIEEH+G+KTAVQIRSHAQKFFSKV
Subjt:  LRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

P92973 Protein CCA11.2e-2491.38Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQIRSHAQKFFSKV
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

Q6R0H1 Protein LHY2.6e-2491.38Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQIRSHAQKFF+K+
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

Arabidopsis top hitse value%identityAlignment
AT1G01060.1 Homeodomain-like superfamily protein1.9e-2591.38Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQIRSHAQKFF+K+
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

AT1G01060.2 Homeodomain-like superfamily protein1.9e-2591.38Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQIRSHAQKFF+K+
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

AT1G01060.3 Homeodomain-like superfamily protein1.9e-2591.38Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQIRSHAQKFF+K+
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

AT1G01060.4 Homeodomain-like superfamily protein1.9e-2591.38Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTKTAVQIRSHAQKFF+K+
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV

AT2G46830.1 circadian clock associated 18.4e-2691.38Show/hide
Query:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV
        RKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TKTAVQIRSHAQKFFSKV
Subjt:  RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGTATCAGCACCGTACGCCCGAAGCCAAGCAGTAGAAATGCACGGTGGGGAAGCCCCCTCCCAATATTCGATGGAACGTTATCCGACGCCTCAGGCTTTTCTAGA
AAAAAGCCACGTCAGCCGAAAAAGTCCTGCTCTCCACTCTCGTCCCGCACGTGACCGGCAACTTCCGGTTACGATGATCGCCACGTCTTCAGATTCTTCTTACTTTTTCG
TCCAATTCACGTTCTTAATTGCCGGAAACCATGAGTTTTCTGGTGAGTTTCTGCTGATTTCACTCTCATGCATGATCGGAGTGGCCACTGTTCCTTTCCGAATTACCTCC
AACCATGGCTGTCTTCGAAGGTTTTGGCGTCTTCCAGTTCGTTTTGTAGCATCAAGGAGCCAGGTGACAAAAGCAACAACGGCTTCATCATTTAGAATTTTTTATATCCC
TAACAATGAAAGGAGGTTTGCGTTTTACCCGTTGCTCGTTAGAGAGGATTTGAAGCAGCGGCAGCTGCTCAGGAAGCCATATACTATTACAAAACAACGAGAGCGCTGGA
CGGAGGAGGAGCACAATAGATTTCTAGAGGCGTTGAAACTCTATGGCCGAGCATGGCAGAGAATTGAAGAACATATTGGAACGAAAACTGCAGTCCAGATACGAAGTCAT
GCACAGAAGTTCTTTTCAAAGGTCAATGGTTGTTTAGTTCATAATCTTGCTTACTCATCAGTAGGGACATTCGAGCATTTCTTACAGGGTATTAATTACCAAACGCTTAC
TGAAAGTTCCAAGCTAACAGGAAAGAATGCACAGTTCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGTATCAGCACCGTACGCCCGAAGCCAAGCAGTAGAAATGCACGGTGGGGAAGCCCCCTCCCAATATTCGATGGAACGTTATCCGACGCCTCAGGCTTTTCTAGA
AAAAAGCCACGTCAGCCGAAAAAGTCCTGCTCTCCACTCTCGTCCCGCACGTGACCGGCAACTTCCGGTTACGATGATCGCCACGTCTTCAGATTCTTCTTACTTTTTCG
TCCAATTCACGTTCTTAATTGCCGGAAACCATGAGTTTTCTGGTGAGTTTCTGCTGATTTCACTCTCATGCATGATCGGAGTGGCCACTGTTCCTTTCCGAATTACCTCC
AACCATGGCTGTCTTCGAAGGTTTTGGCGTCTTCCAGTTCGTTTTGTAGCATCAAGGAGCCAGGTGACAAAAGCAACAACGGCTTCATCATTTAGAATTTTTTATATCCC
TAACAATGAAAGGAGGTTTGCGTTTTACCCGTTGCTCGTTAGAGAGGATTTGAAGCAGCGGCAGCTGCTCAGGAAGCCATATACTATTACAAAACAACGAGAGCGCTGGA
CGGAGGAGGAGCACAATAGATTTCTAGAGGCGTTGAAACTCTATGGCCGAGCATGGCAGAGAATTGAAGAACATATTGGAACGAAAACTGCAGTCCAGATACGAAGTCAT
GCACAGAAGTTCTTTTCAAAGGTCAATGGTTGTTTAGTTCATAATCTTGCTTACTCATCAGTAGGGACATTCGAGCATTTCTTACAGGGTATTAATTACCAAACGCTTAC
TGAAAGTTCCAAGCTAACAGGAAAGAATGCACAGTTCAAATAG
Protein sequenceShow/hide protein sequence
MVVSAPYARSQAVEMHGGEAPSQYSMERYPTPQAFLEKSHVSRKSPALHSRPARDRQLPVTMIATSSDSSYFFVQFTFLIAGNHEFSGEFLLISLSCMIGVATVPFRITS
NHGCLRRFWRLPVRFVASRSQVTKATTASSFRIFYIPNNERRFAFYPLLVREDLKQRQLLRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSH
AQKFFSKVNGCLVHNLAYSSVGTFEHFLQGINYQTLTESSKLTGKNAQFK