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Lag0015594 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015594
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTMV resistance protein N
Genome locationchr12:17182214..17183346
RNA-Seq ExpressionLag0015594
SyntenyLag0015594
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016071 - mRNA metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51651.2 hypothetical protein Csa_008503 [Cucumis sativus]5.8e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LEK+P  + L SL+ L+     KLE LP+FDENMKSLR M L GT+I+ LP + GYLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
KGN65609.2 hypothetical protein Csa_019785 [Cucumis sativus]9.9e-0756.92Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LE++P  + L SL+ L+L    K+E LP+FDENMKSLR+M LKGT+I++LP +  YLIGLE L L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
TYK06440.1 TMV resistance protein N [Cucumis melo var. makuwa]2.6e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LE++P  + L SL+ L+L    KLE LP+FDENMKSLR+M LKGT+I++LP +  YLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
XP_008444002.1 PREDICTED: TMV resistance protein N [Cucumis melo]2.6e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LE++P  + L SL+ L+L    KLE LP+FDENMKSLR+M LKGT+I++LP +  YLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
XP_031741747.1 TMV resistance protein N [Cucumis sativus]5.8e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LEK+P  + L SL+ L+     KLE LP+FDENMKSLR M L GT+I+ LP + GYLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
TrEMBL top hitse value%identityAlignment
A0A0A0KNK0 TIR domain-containing protein2.8e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LEK+P  + L SL+ L+     KLE LP+FDENMKSLR M L GT+I+ LP + GYLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
A0A0A0LWV1 TIR domain-containing protein4.8e-0756.92Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LE++P  + L SL+ L+L    K+E LP+FDENMKSLR+M LKGT+I++LP +  YLIGLE L L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
A0A1S3B9C2 TMV resistance protein N1.3e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LE++P  + L SL+ L+L    KLE LP+FDENMKSLR+M LKGT+I++LP +  YLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
A0A5A7TTC7 TMV resistance protein N1.3e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LE++P  + L SL+ L+L    KLE LP+FDENMKSLR+M LKGT+I++LP +  YLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
A0A5D3C521 TMV resistance protein N1.3e-0758.46Show/hide
Query:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        LE++P  + L SL+ L+L    KLE LP+FDENMKSLR+M LKGT+I++LP +  YLIGLE L+L
Subjt:  LEKIPDFM-LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
SwissProt top hitse value%identityAlignment
V9M2S5 Disease resistance protein RPV13.9e-0643.75Show/hide
Query:  NCKPLKHVDLSFSYLEKIPDFM--LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
        N K L  + LS + ++ +PD +  L SLE L+L    K E  P+   NMKSLR++ L+ T+IK+LP + G L  LE+LSL
Subjt:  NCKPLKHVDLSFSYLEKIPDFM--LNSLEVLNL----KLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEILSL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGAGAAATAATCAATATGTTGAAAGAGAATTCCGGAATCGATGCAGTTAAAGCAATAAAGCTAGACTTGTCTAACGTGGTCCAGGAATGGAAGCCAATTGATCC
AAAAAATTGCAAGCCTTTGAAGCATGTTGATCTCAGTTTCTCTTACTTGGAGAAAATTCCTGACTTTATGCTAAATTCCCTTGAAGTTCTGAATCTAAAGCTTGAACATC
TACCACAATTTGATGAAAACATGAAATCTTTAAGGAAGATGAAGTTGAAAGGAACTTCCATAAAAGAGTTACCTCCAACAACTGGATATCTTATTGGGCTTGAGATTTTG
AGTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGGAGAAATAATCAATATGTTGAAAGAGAATTCCGGAATCGATGCAGTTAAAGCAATAAAGCTAGACTTGTCTAACGTGGTCCAGGAATGGAAGCCAATTGATCC
AAAAAATTGCAAGCCTTTGAAGCATGTTGATCTCAGTTTCTCTTACTTGGAGAAAATTCCTGACTTTATGCTAAATTCCCTTGAAGTTCTGAATCTAAAGCTTGAACATC
TACCACAATTTGATGAAAACATGAAATCTTTAAGGAAGATGAAGTTGAAAGGAACTTCCATAAAAGAGTTACCTCCAACAACTGGATATCTTATTGGGCTTGAGATTTTG
AGTCTCTAG
Protein sequenceShow/hide protein sequence
MTGEIINMLKENSGIDAVKAIKLDLSNVVQEWKPIDPKNCKPLKHVDLSFSYLEKIPDFMLNSLEVLNLKLEHLPQFDENMKSLRKMKLKGTSIKELPPTTGYLIGLEIL
SL