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Lag0015602 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015602
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:17422106..17422454
RNA-Seq ExpressionLag0015602
SyntenyLag0015602
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53035.1 hypothetical protein EZV62_022204 [Acer yangbiense]1.9e-0839.33Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN
        R+ S  LL+RL++V +LPW+  GDFN+++ M +KEGG                       GF  PKYTW +   G+N I+ERLD++L N
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN

TXG57139.1 hypothetical protein EZV62_018452 [Acer yangbiense]6.7e-0943.9Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG
        R  S ELL+RL++V  LPW+ GGDFNEL+ M++K      GPK+TW +   G   I+ER+DR L N         + V+H G
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG

TXG63522.1 hypothetical protein EZV62_010516 [Acer yangbiense]1.6e-1037.14Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKIT
        R  +  L++RLK+V +LPW+ GGDFNEL+ M +K GG                       GF+GPK+TW +   G + ++ERLDR L +     +  +IT
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKIT

Query:  VEHRG
        +EH G
Subjt:  VEHRG

TXG73106.1 hypothetical protein EZV62_001685 [Acer yangbiense]1.8e-0944.44Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG---------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN
        R+ S  LL+RL+   +LPW+ GGDFNEL+ ++DK GG               GF+GPK TW +   G + I+ERLDR+L N
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG---------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN

TXG73661.1 hypothetical protein EZV62_002240 [Acer yangbiense]3.5e-1038.38Show/hide
Query:  LLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG
        LL+RL++V +LPW+  GDFNE++ M +KEGG                       GF GPKYTW +   G+N I+ERLDR+L N         + + H G
Subjt:  LLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG

TrEMBL top hitse value%identityAlignment
A0A5C7H981 Uncharacterized protein9.4e-0939.33Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN
        R+ S  LL+RL++V +LPW+  GDFN+++ M +KEGG                       GF  PKYTW +   G+N I+ERLD++L N
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN

A0A5C7HK10 CCHC-type domain-containing protein3.2e-0943.9Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG
        R  S ELL+RL++V  LPW+ GGDFNEL+ M++K      GPK+TW +   G   I+ER+DR L N         + V+H G
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG

A0A5C7I4W9 RNase H domain-containing protein7.7e-1137.14Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKIT
        R  +  L++RLK+V +LPW+ GGDFNEL+ M +K GG                       GF+GPK+TW +   G + ++ERLDR L +     +  +IT
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKIT

Query:  VEHRG
        +EH G
Subjt:  VEHRG

A0A5C7IWJ4 CCHC-type domain-containing protein1.7e-1038.38Show/hide
Query:  LLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG
        LL+RL++V +LPW+  GDFNE++ M +KEGG                       GF GPKYTW +   G+N I+ERLDR+L N         + + H G
Subjt:  LLKRLKKVSSLPWLIGGDFNELMFMDDKEGG-----------------------GFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRG

A0A5C7IX59 DUF4283 domain-containing protein8.5e-1044.44Show/hide
Query:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG---------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN
        R+ S  LL+RL+   +LPW+ GGDFNEL+ ++DK GG               GF+GPK TW +   G + I+ERLDR+L N
Subjt:  REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGG---------------GFNGPKYTWRSSPRGTNVIEERLDRYLIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAGGAATCACAAGAGCTCTTAAAAAGACTCAAGAAAGTTTCTAGTCTCCCCTGGCTGATAGGGGGAGACTTTAATGAGCTGATGTTTATGGATGACAAGGAGGG
AGGAGGGTTTAATGGTCCAAAATATACTTGGAGAAGCAGCCCTCGAGGTACAAATGTGATTGAAGAGAGGCTTGATAGGTACCTCATCAACCCAGAAATCAACCAAATTC
TCATCAAAATAACAGTGGAACACCGAGGTATTACAGCTCAGACCACAGACCGATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAGGAATCACAAGAGCTCTTAAAAAGACTCAAGAAAGTTTCTAGTCTCCCCTGGCTGATAGGGGGAGACTTTAATGAGCTGATGTTTATGGATGACAAGGAGGG
AGGAGGGTTTAATGGTCCAAAATATACTTGGAGAAGCAGCCCTCGAGGTACAAATGTGATTGAAGAGAGGCTTGATAGGTACCTCATCAACCCAGAAATCAACCAAATTC
TCATCAAAATAACAGTGGAACACCGAGGTATTACAGCTCAGACCACAGACCGATTGTAG
Protein sequenceShow/hide protein sequence
MREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGFNGPKYTWRSSPRGTNVIEERLDRYLINPEINQILIKITVEHRGITAQTTDRL