; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015611 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015611
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:17626195..17627721
RNA-Seq ExpressionLag0015611
SyntenyLag0015611
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]2.5e-3135.29Show/hide
Query:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-
        +RP VF+  SLMA G  +SLA+ VLANIYHGL  ++ AS  +GR+D   P+HY+ GWLAHYFG +Y +P +V                       E+ H 
Subjt:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-

Query:  -------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDDIKEECSSEQSLTSPD
                           D+PND+G + P +TL+NIL+HWR+C R N   +++LP R+L P  HVT R+  WW+ K+  Y  D+     S   S+  P 
Subjt:  -------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDDIKEECSSEQSLTSPD

Query:  AFASTVKNFESSHASSSKQVVNSSCRS-TEKVPQHTHE
        +     KN  S+      ++V +   +  E+V +H  E
Subjt:  AFASTVKNFESSHASSSKQVVNSSCRS-TEKVPQHTHE

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.5e-3238Show/hide
Query:  SRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV------------------
        S+ +    + +RP VF+AASLMA G  +SLA+ +LANIYHGL  ++ AS  +GR+D   P+HY+ GWLAHYFG +Y +  KV                  
Subjt:  SRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV------------------

Query:  -----EVQH-------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD
             E+ H                         D+PND+G + P +TL+NIL+HWR+  R N   +++LPAR+L P  HVT R+  WW+ KY  Y  D+
Subjt:  -----EVQH-------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]1.5e-3137.19Show/hide
Query:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-
        +RP VF+ ASLM  G  +SLA+ VLANIYHGL  ++ AS  +GR+D   P+HY+ GWLAHYFG +Y +P +V                       E+ H 
Subjt:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-

Query:  ---------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD
                                         D+PND+G + P +TL+NIL+HWR+C+R N   +++LPAR+L P  HVT R+  WW+ K+  Y  D+
Subjt:  ---------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD

TYK04206.1 hypothetical protein E5676_scaffold24967G00050 [Cucumis melo var. makuwa]1.5e-3137.67Show/hide
Query:  APGLPFGSRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------
        APG  FGS         +RP VF AASLMA    +SLA+ VLANIYHGL  ++ AS  +GRID   P+HY+ GWLAHYFG +Y +P +V           
Subjt:  APGLPFGSRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------

Query:  ------------EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSR
                    E+ H                                  DIPN LG + PL+T +N+LHHWR+C R N   +++L A +L P  HVT R
Subjt:  ------------EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSR

Query:  YRSWWSEKYDNYLGDDIKEECSS
        +  WW+ K++ Y  D+I    SS
Subjt:  YRSWWSEKYDNYLGDDIKEECSS

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]7.2e-3136.23Show/hide
Query:  VNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV--------------------
        V+    + +RP VF+AASLMA    +SLA+ VLANIYHGL  ++ AS  +G +D   P+HY+ GWLAHYFG +Y +P +V                    
Subjt:  VNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV--------------------

Query:  ---EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKY
           E+ H                                  D+PND+  + P +TL+NIL+HWR+C R N  F+++LPAR+L P  HVT R+  WW+ K+
Subjt:  ---EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKY

Query:  DNYLGDD
          Y  D+
Subjt:  DNYLGDD

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein1.2e-3135.29Show/hide
Query:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-
        +RP VF+  SLMA G  +SLA+ VLANIYHGL  ++ AS  +GR+D   P+HY+ GWLAHYFG +Y +P +V                       E+ H 
Subjt:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-

Query:  -------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDDIKEECSSEQSLTSPD
                           D+PND+G + P +TL+NIL+HWR+C R N   +++LP R+L P  HVT R+  WW+ K+  Y  D+     S   S+  P 
Subjt:  -------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDDIKEECSSEQSLTSPD

Query:  AFASTVKNFESSHASSSKQVVNSSCRS-TEKVPQHTHE
        +     KN  S+      ++V +   +  E+V +H  E
Subjt:  AFASTVKNFESSHASSSKQVVNSSCRS-TEKVPQHTHE

A0A5A7TFC8 PMD domain-containing protein3.5e-3136.23Show/hide
Query:  VNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV--------------------
        V+    + +RP VF+AASLMA    +SLA+ VLANIYHGL  ++ AS  +G +D   P+HY+ GWLAHYFG +Y +P +V                    
Subjt:  VNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV--------------------

Query:  ---EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKY
           E+ H                                  D+PND+  + P +TL+NIL+HWR+C R N  F+++LPAR+L P  HVT R+  WW+ K+
Subjt:  ---EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKY

Query:  DNYLGDD
          Y  D+
Subjt:  DNYLGDD

A0A5A7UET3 Putative mitochondrial protein3.2e-3238Show/hide
Query:  SRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV------------------
        S+ +    + +RP VF+AASLMA G  +SLA+ +LANIYHGL  ++ AS  +GR+D   P+HY+ GWLAHYFG +Y +  KV                  
Subjt:  SRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV------------------

Query:  -----EVQH-------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD
             E+ H                         D+PND+G + P +TL+NIL+HWR+  R N   +++LPAR+L P  HVT R+  WW+ KY  Y  D+
Subjt:  -----EVQH-------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD

A0A5A7UVI5 PMD domain-containing protein7.0e-3237.19Show/hide
Query:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-
        +RP VF+ ASLM  G  +SLA+ VLANIYHGL  ++ AS  +GR+D   P+HY+ GWLAHYFG +Y +P +V                       E+ H 
Subjt:  IRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------------------EVQH-

Query:  ---------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD
                                         D+PND+G + P +TL+NIL+HWR+C+R N   +++LPAR+L P  HVT R+  WW+ K+  Y  D+
Subjt:  ---------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDD

A0A5D3C1C3 Uncharacterized protein7.0e-3237.67Show/hide
Query:  APGLPFGSRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------
        APG  FGS         +RP VF AASLMA    +SLA+ VLANIYHGL  ++ AS  +GRID   P+HY+ GWLAHYFG +Y +P +V           
Subjt:  APGLPFGSRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKV-----------

Query:  ------------EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSR
                    E+ H                                  DIPN LG + PL+T +N+LHHWR+C R N   +++L A +L P  HVT R
Subjt:  ------------EVQH----------------------------------DIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSR

Query:  YRSWWSEKYDNYLGDDIKEECSS
        +  WW+ K++ Y  D+I    SS
Subjt:  YRSWWSEKYDNYLGDDIKEECSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCTACTTGCTTAGCGCTTCAAGAACTGACCATTCCCATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAGGGTGAACAAAGGGAATGCTAACCACATTCG
CCCAAGTGTTTTTAAGGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCAATCCTCGTCCTTGCCAACATCTACCACGGGTTAAGCAAAGTTTCCAATGCTT
CCGTTTCAGTTGGACGCATAGATGCTTCTCTCCCCGTGCATTACATTTTTGGTTGGCTCGCCCATTATTTTGGTATCAATTATAAGATTCCAGCGAAAGTTGAGGTCCAG
CATGACATACCTAATGACTTAGGAGAAGTTTTGCCCCTAGTCACCTTGGAAAACATTTTACACCACTGGCGGGTTTGCCTGCGAACCAATGTGGAGTTTCAAATATTTCT
TCCAGCTCGTACATTGAATCCTCAAGACCATGTCACTTCACGTTATCGAAGTTGGTGGTCAGAAAAGTATGATAATTACCTAGGGGACGACATAAAGGAAGAATGTTCGA
GCGAGCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTACCGTGAAGAACTTCGAAAGCTCTCATGCATCTTCGAGCAAACAAGTCGTGAATTCATCTTGTCGTTCTACT
GAGAAAGTCCCACAGCATACTCATGAGAAAGTGGTTGCCCCAGTCTTTGAAGTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTCTACTTGCTTAGCGCTTCAAGAACTGACCATTCCCATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAGGGTGAACAAAGGGAATGCTAACCACATTCG
CCCAAGTGTTTTTAAGGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCAATCCTCGTCCTTGCCAACATCTACCACGGGTTAAGCAAAGTTTCCAATGCTT
CCGTTTCAGTTGGACGCATAGATGCTTCTCTCCCCGTGCATTACATTTTTGGTTGGCTCGCCCATTATTTTGGTATCAATTATAAGATTCCAGCGAAAGTTGAGGTCCAG
CATGACATACCTAATGACTTAGGAGAAGTTTTGCCCCTAGTCACCTTGGAAAACATTTTACACCACTGGCGGGTTTGCCTGCGAACCAATGTGGAGTTTCAAATATTTCT
TCCAGCTCGTACATTGAATCCTCAAGACCATGTCACTTCACGTTATCGAAGTTGGTGGTCAGAAAAGTATGATAATTACCTAGGGGACGACATAAAGGAAGAATGTTCGA
GCGAGCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTACCGTGAAGAACTTCGAAAGCTCTCATGCATCTTCGAGCAAACAAGTCGTGAATTCATCTTGTCGTTCTACT
GAGAAAGTCCCACAGCATACTCATGAGAAAGTGGTTGCCCCAGTCTTTGAAGTTTCTTAG
Protein sequenceShow/hide protein sequence
MHSTCLALQELTIPMFQSAPGLPFGSRVNKGNANHIRPSVFKAASLMAEGKTFSLAILVLANIYHGLSKVSNASVSVGRIDASLPVHYIFGWLAHYFGINYKIPAKVEVQ
HDIPNDLGEVLPLVTLENILHHWRVCLRTNVEFQIFLPARTLNPQDHVTSRYRSWWSEKYDNYLGDDIKEECSSEQSLTSPDAFASTVKNFESSHASSSKQVVNSSCRST
EKVPQHTHEKVVAPVFEVS