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Lag0015612 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015612
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:17685593..17686390
RNA-Seq ExpressionLag0015612
SyntenyLag0015612
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.6e-0742.68Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        MV F E  +S   +LV+L D N+P   GLS +VE+P  G  A  WP   N   +   SVE PL E   A  L+S IH + PN
Subjt:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

KAA0048380.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.7e-0843.9Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        MV F E  +SE  +LV+L D N+P   GLS +VE P  G  A  WP   N   +   SVE PL E   A  L+S IH + PN
Subjt:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.0e-0742.68Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        MV F E  +S   +LV+L D N+P   GLS +VE+P  G  A  WP   N   +   SVE PL E   A  L+S IH + PN
Subjt:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.0e-0742.68Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        MV F E  +S   +LV+L D N+P   GLS +VE+P  G  A  WP   N   +   SVE PL E   A  L+S IH + PN
Subjt:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

TYK06433.1 hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]3.9e-0836.44Show/hide
Query:  MFLGLLSLPRPLARVQGH------VPWTFVAA--TVMVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLD
        ++  +L +PR L  V+         P+ F+ A    MV F E  +S   +LV+L D N+P   GLS +VE+P  G  A  WP   N   +   SVE PL 
Subjt:  MFLGLLSLPRPLARVQGH------VPWTFVAA--TVMVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLD

Query:  EDSKACFLESPIHIQNPN
        E   A  L+S IH + PN
Subjt:  EDSKACFLESPIHIQNPN

TrEMBL top hitse value%identityAlignment
A0A5A7TZ08 Putative mitochondrial protein3.3e-0843.9Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        MV F E  +SE  +LV+L D N+P   GLS +VE P  G  A  WP   N   +   SVE PL E   A  L+S IH + PN
Subjt:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

A0A5A7U2Q8 PMD domain-containing protein1.2e-0742.17Show/hide
Query:  VMVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        +MV F E  +S   +LV+L D N+P   GLS LVE+P  G +A  WP   N   +   SVE PL E+     L+S IH + PN
Subjt:  VMVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

A0A5A7UET3 Putative mitochondrial protein9.5e-0842.68Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        MV F E  +S   +LV+L D N+P   GLS +VE+P  G  A  WP   N   +   SVE PL E   A  L+S IH + PN
Subjt:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

A0A5A7VHW8 PMD domain-containing protein9.5e-0842.68Show/hide
Query:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN
        MV F E  +S   +LV+L D N+P   GLS +VE+P  G  A  WP   N   +   SVE PL E   A  L+S IH + PN
Subjt:  MVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPN

A0A5D3C3D7 PMD domain-containing protein1.9e-0836.44Show/hide
Query:  MFLGLLSLPRPLARVQGH------VPWTFVAA--TVMVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLD
        ++  +L +PR L  V+         P+ F+ A    MV F E  +S   +LV+L D N+P   GLS +VE+P  G  A  WP   N   +   SVE PL 
Subjt:  MFLGLLSLPRPLARVQGH------VPWTFVAA--TVMVCFAEHIVSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLD

Query:  EDSKACFLESPIHIQNPN
        E   A  L+S IH + PN
Subjt:  EDSKACFLESPIHIQNPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAAGGACATGTTCCTTGGACTTTTGTCACTGCCACGTCGTTCAGCATGAGTACAAGGACATGTTCCTTGGACTTTTGTCGCTGCCACGTCCTCTAGCACGAGT
ACAAGGACATGTTCCTTGGACATTTGTCGCTGCCACGTCCTTCAGCATGAGTACAAGGACATGTTCCTTGGACTTTTGTTACTGCCACGTCGTTCAGCATGAGTACAAGG
ACATGTTCCTTGGACTTTTGTCGCTGCCACGTCCTCTAGCACGAGTACAAGGACATGTTCCTTGGACATTTGTCGCTGCCACAGTCATGGTGTGTTTTGCAGAACATATT
GTTTCTGAAAAGACGTACCTTGTTCTCCTGAAAGACAACAATGAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAGAGCCTAAGACTGGACGTCTTGCAGCCCAATG
GCCACCACCACTAAATTTGCATACTATTTCGGATTGGTCCGTAGAAAGGCCTTTAGACGAAGATTCTAAGGCTTGTTTTCTAGAATCCCCAATCCATATACAAAATCCTA
ATCGACATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTACAAGGACATGTTCCTTGGACTTTTGTCACTGCCACGTCGTTCAGCATGAGTACAAGGACATGTTCCTTGGACTTTTGTCGCTGCCACGTCCTCTAGCACGAGT
ACAAGGACATGTTCCTTGGACATTTGTCGCTGCCACGTCCTTCAGCATGAGTACAAGGACATGTTCCTTGGACTTTTGTTACTGCCACGTCGTTCAGCATGAGTACAAGG
ACATGTTCCTTGGACTTTTGTCGCTGCCACGTCCTCTAGCACGAGTACAAGGACATGTTCCTTGGACATTTGTCGCTGCCACAGTCATGGTGTGTTTTGCAGAACATATT
GTTTCTGAAAAGACGTACCTTGTTCTCCTGAAAGACAACAATGAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAGAGCCTAAGACTGGACGTCTTGCAGCCCAATG
GCCACCACCACTAAATTTGCATACTATTTCGGATTGGTCCGTAGAAAGGCCTTTAGACGAAGATTCTAAGGCTTGTTTTCTAGAATCCCCAATCCATATACAAAATCCTA
ATCGACATCCATAG
Protein sequenceShow/hide protein sequence
MSTRTCSLDFCHCHVVQHEYKDMFLGLLSLPRPLARVQGHVPWTFVAATSFSMSTRTCSLDFCYCHVVQHEYKDMFLGLLSLPRPLARVQGHVPWTFVAATVMVCFAEHI
VSEKTYLVLLKDNNEPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDWSVERPLDEDSKACFLESPIHIQNPNRHP