| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.9e-213 | 56.83 | Show/hide |
Query: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
+ + L GE+TL+VG GE++SA+ VGD+ +FF ++RY++L +V VP +KRNLISI+C+LE Y++SF VN FI KG ICSA ENNLY LRP +
Subjt: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
Query: RAILNNEMFKTAETQPKRQKVSQSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL--------------
+LN EMF+T ETQ K+QKVS + YLWHLRLGHINLNRI RLVK+G+L+QLED +LP CESCLEGKMTKR FTGKG RA PLEL
Subjt: RAILNNEMFKTAETQPKRQKVSQSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL--------------
Query: ------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDMVR
K EY LSA TPQQNGVSERRNRTLLDMVR
Subjt: ------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDMVR
Query: SMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV------------KIVL-----SELSG------------KAT
SMMSYAQLP SFWGYA+ETA++ILN PSKSV ETP+ELWKGRK SLR+FRIWGCPAHV K+ L E G +T
Subjt: SMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV------------KIVL-----SELSG------------KAT
Query: NESTRVVDEA---GPSTRV---------ADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQAMN
N + D P +++ D+PSS ST+V+D+ + S Q+H SQELR+ RRSGR+V QP RYLGL ET +IPDDGVEDPLT++QAMN
Subjt: NESTRVVDEA---GPSTRV---------ADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQAMN
Query: DVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIW
DVD DQW+KAM+LEMESMYFN VW LVDLP VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQKE VDYEETFSPVAMLKSIRILLSIATFY+YEIW
Subjt: DVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIW
Query: QKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNSVAFLVLYVDDILLIGNDVE
Q DVKTAFLNGNL+E+I+M QPEGF+AQ QEQK NVDEPCVYK+I+N+ VAFL+LYVDDILLIGNDVE
Subjt: QKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNSVAFLVLYVDDILLIGNDVE
Query: YLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
YL D+KKWL+T+FQMK LGEAQY+LGIQI+RN
Subjt: YLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-230 | 59.12 | Show/hide |
Query: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
+ + L+ EMTL+VG G++ISA+ VGD K+FF ++M L+N+YIVP+IKRNL+S+SCL+E YS++FS+N AFI K G ICSAK+ENNLYVLRP E+
Subjt: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
Query: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
+A+LN+EMF+TA TQ KRQ++S +TYLWHLRLGHINL+RIGRLVKNGLL++L+D +LP CESCLEGKMTKRPFTGKGYRA EPLEL
Subjt: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
Query: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
K EY LSA GTPQQNGVSERRNRTLLDM
Subjt: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
Query: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
VRSMMSYAQLPSSFWGYAVETAV+ILN PSKSVSETPFELW+GRK SL HFRIWGCPAHV
Subjt: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
Query: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
K+VLSE AT+ESTRVVDE GPS+RV DE +TSGQ+HPSQ LRM RRSGR+V QP RYLGL ET
Subjt: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
Query: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
VIPDDGVEDPL+++QAMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPIGCKWIYKRKRD+AGKVQTFKARLVAKGYTQ+E VDYEETFSPVAM
Subjt: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
Query: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
LKSIRILLSIATFYDYEIWQ DVKTAFLNGNL+E+IFMSQPEGF+ QGQEQK NVDEPCVYK+I
Subjt: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
Query: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
VAFLVLYVDDILLIGNDV YL D+K WL+ +FQMK LGEAQYVLGIQIIR+
Subjt: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-227 | 58.59 | Show/hide |
Query: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
+ + L+ EMTL+VG G++ISA+ VGD K+FF ++M L+N+YIVP+IKRNL+S+SCL+E YS++FS+N AFI K G ICSAK+ENNLYVLRP E+
Subjt: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
Query: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
+A+LN+EMF+TA TQ KRQ++S +TYLWHLRLGHINL+RIGRLVK+GLL++L+D +LP CESCLEGKMTKRPFTGKGYRA EPLEL
Subjt: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
Query: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
K EY LSA GTPQQNGVSERRNRTLLDM
Subjt: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
Query: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
VRSMMSYAQLPSSFWGYAVETAV+ILN PSKSVSETPFELW+GRK SL HFRIWGCPAHV
Subjt: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
Query: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
K+VLSE AT+ESTRVVDE GPS+RV DE +TSGQ+HPSQ LRM RRSGR+V QP RYLGL ET
Subjt: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
Query: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
VIPDDGVEDPL+++QAMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPIGCKWIYKRKRD+AGKVQTFKARLVAKGYT+KE VDYEETFS VAM
Subjt: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
Query: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
LKSIRILLSIA FYDYEIWQ DVKTAFLNGNL+E+IFMSQPEGF+ QGQEQK NVDEPCVYK+I
Subjt: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
Query: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
VAFLVLYVDDILLIGNDV YL D+K WL+ +FQMK LGE QYVLGIQIIR+
Subjt: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-206 | 54.32 | Show/hide |
Query: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
G++ + L+ GEMT+RVG G ++SA VG +++ + ++LL+NVY+VP +KRNLIS+ CLLEQ YS++F+VN FI K G +ICSAK+ENNLYVLR +
Subjt: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
Query: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
S+A+LN EMFKTA TQ KR K+S ++ +LWHLRLGHINLNRI RLVKNGLLS+LE+ +LP+CESCLEGKMTKRPFTGKG+RA EPLEL
Subjt: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
Query: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
K EY LSA GTPQQNGVSERRNRTLL
Subjt: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
Query: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
DMVRSMMSYA LP+SFWGYAV+TAVYILN PSKSVSETP +LW GRK SLRHFRIWGCPAHV
Subjt: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
Query: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
KIVL+ELS + T STRVV+E TRV G STR H Q LR RRSGR+ P RY+ L E
Subjt: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
Query: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
T TVI D +EDPLTF++AM DVD D+W+KAM+LE+ESMYFN VWDLVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ E VDYEETFSPV
Subjt: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
Query: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
AMLKSIRILLSIA ++DYEIWQ DVKTAFLNGNL+E I+M QPEGF+ GQEQK VDEPCVYKRIIN
Subjt: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
Query: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
SVAFLVLYVDDILLIGND+ L DIK+WL+T+FQMK LGEAQ+VLGIQI R+
Subjt: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-206 | 54.32 | Show/hide |
Query: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
G++ + L+ GEMT+RVG G ++SA VG +++ + ++LL+NVY+VP +KRNLIS+ CLLEQ YS++F+VN FI K G +ICSAK+ENNLYVLR +
Subjt: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
Query: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
S+A+LN EMFKTA TQ KR K+S ++ +LWHLRLGHINLNRI RLVKNGLLS+LE+ +LP+CESCLEGKMTKRPFTGKG+RA EPLEL
Subjt: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
Query: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
K EY LSA GTPQQNGVSERRNRTLL
Subjt: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
Query: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
DMVRSMMSYA LP+SFWGYAV+TAVYILN PSKSVSETP +LW GRK SLRHFRIWGCPAHV
Subjt: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
Query: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
KIVL+ELS + T STRVV+E TRV G STR H Q LR RRSGR+ P RY+ L E
Subjt: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
Query: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
T TVI D +EDPLTF++AM DVD D+W+KAM+LE+ESMYFN VWDLVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ E VDYEETFSPV
Subjt: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
Query: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
AMLKSIRILLSIA ++DYEIWQ DVKTAFLNGNL+E I+M QPEGF+ GQEQK VDEPCVYKRIIN
Subjt: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
Query: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
SVAFLVLYVDDILLIGND+ L DIK+WL+T+FQMK LGEAQ+VLGIQI R+
Subjt: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 6.4e-207 | 54.32 | Show/hide |
Query: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
G++ + L+ GEMT+RVG G ++SA VG +++ + ++LL+NVY+VP +KRNLIS+ CLLEQ YS++F+VN FI K G +ICSAK+ENNLYVLR +
Subjt: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
Query: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
S+A+LN EMFKTA TQ KR K+S ++ +LWHLRLGHINLNRI RLVKNGLLS+LE+ +LP+CESCLEGKMTKRPFTGKG+RA EPLEL
Subjt: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
Query: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
K EY LSA GTPQQNGVSERRNRTLL
Subjt: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
Query: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
DMVRSMMSYA LP+SFWGYAV+TAVYILN PSKSVSETP +LW GRK SLRHFRIWGCPAHV
Subjt: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
Query: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
KIVL+ELS + T STRVV+E TRV G STR H Q LR RRSGR+ P RY+ L E
Subjt: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
Query: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
T TVI D +EDPLTF++AM DVD D+W+KAM+LE+ESMYFN VWDLVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ E VDYEETFSPV
Subjt: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
Query: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
AMLKSIRILLSIA ++DYEIWQ DVKTAFLNGNL+E I+M QPEGF+ GQEQK VDEPCVYKRIIN
Subjt: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
Query: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
SVAFLVLYVDDILLIGND+ L DIK+WL+T+FQMK LGEAQ+VLGIQI R+
Subjt: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| A0A5A7T2V9 Gag/pol protein | 1.1e-227 | 58.59 | Show/hide |
Query: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
+ + L+ EMTL+VG G++ISA+ VGD K+FF ++M L+N+YIVP+IKRNL+S+SCL+E YS++FS+N AFI K G ICSAK+ENNLYVLRP E+
Subjt: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
Query: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
+A+LN+EMF+TA TQ KRQ++S +TYLWHLRLGHINL+RIGRLVK+GLL++L+D +LP CESCLEGKMTKRPFTGKGYRA EPLEL
Subjt: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
Query: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
K EY LSA GTPQQNGVSERRNRTLLDM
Subjt: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
Query: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
VRSMMSYAQLPSSFWGYAVETAV+ILN PSKSVSETPFELW+GRK SL HFRIWGCPAHV
Subjt: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
Query: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
K+VLSE AT+ESTRVVDE GPS+RV DE +TSGQ+HPSQ LRM RRSGR+V QP RYLGL ET
Subjt: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
Query: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
VIPDDGVEDPL+++QAMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPIGCKWIYKRKRD+AGKVQTFKARLVAKGYT+KE VDYEETFS VAM
Subjt: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
Query: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
LKSIRILLSIA FYDYEIWQ DVKTAFLNGNL+E+IFMSQPEGF+ QGQEQK NVDEPCVYK+I
Subjt: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
Query: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
VAFLVLYVDDILLIGNDV YL D+K WL+ +FQMK LGE QYVLGIQIIR+
Subjt: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| A0A5A7TZD0 Gag/pol protein | 1.9e-230 | 59.12 | Show/hide |
Query: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
+ + L+ EMTL+VG G++ISA+ VGD K+FF ++M L+N+YIVP+IKRNL+S+SCL+E YS++FS+N AFI K G ICSAK+ENNLYVLRP E+
Subjt: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
Query: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
+A+LN+EMF+TA TQ KRQ++S +TYLWHLRLGHINL+RIGRLVKNGLL++L+D +LP CESCLEGKMTKRPFTGKGYRA EPLEL
Subjt: RAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL------------
Query: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
K EY LSA GTPQQNGVSERRNRTLLDM
Subjt: --------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDM
Query: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
VRSMMSYAQLPSSFWGYAVETAV+ILN PSKSVSETPFELW+GRK SL HFRIWGCPAHV
Subjt: VRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV---------------------------------------
Query: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
K+VLSE AT+ESTRVVDE GPS+RV DE +TSGQ+HPSQ LRM RRSGR+V QP RYLGL ET
Subjt: -------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETP
Query: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
VIPDDGVEDPL+++QAMNDVD DQWVKAMDLEMESMYFN VW+LVDLPEGVKPIGCKWIYKRKRD+AGKVQTFKARLVAKGYTQ+E VDYEETFSPVAM
Subjt: TVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAM
Query: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
LKSIRILLSIATFYDYEIWQ DVKTAFLNGNL+E+IFMSQPEGF+ QGQEQK NVDEPCVYK+I
Subjt: LKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNS
Query: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
VAFLVLYVDDILLIGNDV YL D+K WL+ +FQMK LGEAQYVLGIQIIR+
Subjt: VAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| A0A5D3CPJ6 Gag/pol protein | 6.4e-207 | 54.32 | Show/hide |
Query: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
G++ + L+ GEMT+RVG G ++SA VG +++ + ++LL+NVY+VP +KRNLIS+ CLLEQ YS++F+VN FI K G +ICSAK+ENNLYVLR +
Subjt: GVADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPI
Query: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
S+A+LN EMFKTA TQ KR K+S ++ +LWHLRLGHINLNRI RLVKNGLLS+LE+ +LP+CESCLEGKMTKRPFTGKG+RA EPLEL
Subjt: ESRAILNNEMFKTAETQPKRQKVS--QSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL----------
Query: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
K EY LSA GTPQQNGVSERRNRTLL
Subjt: ----------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLL
Query: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
DMVRSMMSYA LP+SFWGYAV+TAVYILN PSKSVSETP +LW GRK SLRHFRIWGCPAHV
Subjt: DMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV-------------------------------------
Query: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
KIVL+ELS + T STRVV+E TRV G STR H Q LR RRSGR+ P RY+ L E
Subjt: ---------------------KIVLSELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAE
Query: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
T TVI D +EDPLTF++AM DVD D+W+KAM+LE+ESMYFN VWDLVD P+GVKPIGCKWIYKRKR GKVQTFKARLVAKGYTQ E VDYEETFSPV
Subjt: TPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPV
Query: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
AMLKSIRILLSIA ++DYEIWQ DVKTAFLNGNL+E I+M QPEGF+ GQEQK VDEPCVYKRIIN
Subjt: AMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIIN
Query: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
SVAFLVLYVDDILLIGND+ L DIK+WL+T+FQMK LGEAQ+VLGIQI R+
Subjt: NSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| E2GK51 Gag/pol protein (Fragment) | 9.2e-214 | 56.83 | Show/hide |
Query: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
+ + L GE+TL+VG GE++SA+ VGD+ +FF ++RY++L +V VP +KRNLISI+C+LE Y++SF VN FI KG ICSA ENNLY LRP +
Subjt: ADYPTLDAGEMTLRVGIGELISAKVVGDIKMFFSRERYMLLDNVYIVPRIKRNLISISCLLEQEYSVSFSVNGAFITKKGADICSAKMENNLYVLRPIES
Query: RAILNNEMFKTAETQPKRQKVSQSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL--------------
+LN EMF+T ETQ K+QKVS + YLWHLRLGHINLNRI RLVK+G+L+QLED +LP CESCLEGKMTKR FTGKG RA PLEL
Subjt: RAILNNEMFKTAETQPKRQKVSQSTYLWHLRLGHINLNRIGRLVKNGLLSQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLEL--------------
Query: ------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDMVR
K EY LSA TPQQNGVSERRNRTLLDMVR
Subjt: ------------------------------KNMEY----------------------------------------LSALGTPQQNGVSERRNRTLLDMVR
Query: SMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV------------KIVL-----SELSG------------KAT
SMMSYAQLP SFWGYA+ETA++ILN PSKSV ETP+ELWKGRK SLR+FRIWGCPAHV K+ L E G +T
Subjt: SMMSYAQLPSSFWGYAVETAVYILNVAPSKSVSETPFELWKGRKVSLRHFRIWGCPAHV------------KIVL-----SELSG------------KAT
Query: NESTRVVDEA---GPSTRV---------ADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQAMN
N + D P +++ D+PSS ST+V+D+ + S Q+H SQELR+ RRSGR+V QP RYLGL ET +IPDDGVEDPLT++QAMN
Subjt: NESTRVVDEA---GPSTRV---------ADEPSSEAGPSTRVIDEPSTSGQAHPSQELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQAMN
Query: DVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIW
DVD DQW+KAM+LEMESMYFN VW LVDLP VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQKE VDYEETFSPVAMLKSIRILLSIATFY+YEIW
Subjt: DVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIW
Query: QKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNSVAFLVLYVDDILLIGNDVE
Q DVKTAFLNGNL+E+I+M QPEGF+AQ QEQK NVDEPCVYK+I+N+ VAFL+LYVDDILLIGNDVE
Subjt: QKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQK---------------------------------NVDEPCVYKRIINNSVAFLVLYVDDILLIGNDVE
Query: YLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
YL D+KKWL+T+FQMK LGEAQY+LGIQI+RN
Subjt: YLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.8e-39 | 26.03 | Show/hide |
Query: GKGYRANEPLEL---KNMEY-LSALGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSV---SETPFELWKGRKVSLRHFR
G+ Y +NE + K + Y L+ TPQ NGVSER RT+ + R+M+S A+L SFWG AV TA Y++N PS+++ S+TP+E+W +K L+H R
Subjt: GKGYRANEPLEL---KNMEY-LSALGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSV---SETPFELWKGRKVSLRHFR
Query: IWGCPAHVKIVLSELSGKATNESTR---------------------------VVDEAG---------PSTRVADEPSSE----AGPSTRVI--DEPSTSG
++G +V I GK ++S + VVDE + + D SE S ++I + P+ S
Subjt: IWGCPAHVKIVLSELSGKATNESTR---------------------------VVDEAG---------PSTRVADEPSSE----AGPSTRVI--DEPSTSG
Query: QAHPSQELRMLRRS--------GRIVIQPE---------------------RYL-------------------------GLAETPTVIPDDGVEDP----
+ Q L+ + S R +IQ E +Y +ET + + G+++P
Subjt: QAHPSQELRMLRRS--------GRIVIQPE---------------------RYL-------------------------GLAETPTVIPDDGVEDP----
Query: -------------------------------LTFRQAMNDV-----------DHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAG
L NDV D W +A++ E+ + N W + PE + +W++ K + G
Subjt: -------------------------------LTFRQAMNDV-----------DHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAG
Query: KVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEG-------------------------F
+KARLVA+G+TQK ++DYEETF+PVA + S R +LS+ Y+ ++ Q DVKTAFLNG L E I+M P+G F
Subjt: KVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEG-------------------------F
Query: VAQGQEQKNVD------EPCVY---KRIINNSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQI
Q K + + C+Y K IN ++ +++LYVDD+++ D+ + + K++L +F+M L E ++ +GI+I
Subjt: VAQGQEQKNVD------EPCVY---KRIINNSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-64 | 34.08 | Show/hide |
Query: GTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCP--AHV-KIVLSELSGK------
GTPQ NGV+ER NRT+++ VRSM+ A+LP SFWG AV+TA Y++N +PS ++ E P +W ++VS H +++GC AHV K ++L K
Subjt: GTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCP--AHV-KIVLSELSGK------
Query: -----------------------------------ATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQ-------------------AHPSQ
A + S +V + P+ S+ + DE S G+ HP+Q
Subjt: -----------------------------------ATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEPSTSGQ-------------------AHPSQ
Query: ---ELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQ
+ + LRRS R ++ RY T V+ D +P + ++ ++ + +Q +KAM EMES+ N + LV+LP+G +P+ CKW++K K+D K+
Subjt: ---ELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQ
Query: TFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQ---------------------
+KARLV KG+ QK+ +D++E FSPV + SIR +LS+A D E+ Q DVKTAFL+G+L+E I+M QPEGF G++
Subjt: TFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQ---------------------
Query: ------------KNVDEPCVY-KRIINNSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNPERDAEITWV
K +PCVY KR N+ L+LYVDD+L++G D +A +K LS F MK LG AQ +LG++I+R ER + W+
Subjt: ------------KNVDEPCVY-KRIINNSVAFLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNPERDAEITWV
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.7e-13 | 40.7 | Show/hide |
Query: WVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIA
W +AM E++++ N+ W LV P +GCKW++K K + G + KARLVAKG+ Q+E + + ET+SPV +IR +L++A
Subjt: WVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.0e-31 | 29.3 | Show/hide |
Query: SELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEP------STSGQAHPSQELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQA
S+L+ + + P+T + +S PS + P + + QA P M R+ +I+P LA + +P T QA
Subjt: SELSGKATNESTRVVDEAGPSTRVADEPSSEAGPSTRVIDEP------STSGQAHPSQELRMLRRSGRIVIQPERYLGLAETPTVIPDDGVEDPLTFRQA
Query: MNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEG-VKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDY
+ D ++W AM E+ + N WDLV P V +GC+WI+ +K ++ G + +KARLVAKGY Q+ +DY ETFSPV SIRI+L +A +
Subjt: MNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEG-VKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIATFYDY
Query: EIWQKDVKTAFLNGNLDENIFMSQPEGFVAQ--------------GQEQ-------------------KNVDEPCVYKRIINNSVAFLVLYVDDILLIGN
I Q DV AFL G L ++++MSQP GF+ + G +Q +V + ++ S+ ++++YVDDIL+ GN
Subjt: EIWQKDVKTAFLNGNLDENIFMSQPEGFVAQ--------------GQEQ-------------------KNVDEPCVYKRIINNSVAFLVLYVDDILLIGN
Query: DVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNPE--RDAEITWVVSAERDAEIITTVVLIPPSPPSPNI
D L + LS F +K E Y LGI+ R P ++ +++ +IT + P PSP +
Subjt: DVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNPE--RDAEITWVVSAERDAEIITTVVLIPPSPPSPNI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.5e-08 | 32.91 | Show/hide |
Query: TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCPAH
TP+ NG+SER++R +++ +++S+A +P ++W YA AVY++N P+ + E+PF+ G + R++GC +
Subjt: TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCPAH
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.4e-32 | 35.51 | Show/hide |
Query: DPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLV-DLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILL
+P T QAM D D+W +AM E+ + N WDLV P V +GC+WI+ +K ++ G + +KARLVAKGY Q+ +DY ETFSPV SIRI+L
Subjt: DPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLV-DLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILL
Query: SIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQ--------------GQEQ-------------------KNVDEPCVYKRIINNSVAFLVLYV
+A + I Q DV AFL G L + ++MSQP GFV + G +Q ++ + ++ S+ ++++YV
Subjt: SIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQ--------------GQEQ-------------------KNVDEPCVYKRIINNSVAFLVLYV
Query: DDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNPE
DDIL+ GND L LS F +K + Y LGI+ R P+
Subjt: DDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNPE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-09 | 28.89 | Show/hide |
Query: SQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLELKNMEYLSALG---------TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYIL
SQ++D T + +S +E + R T E + L+ +YLS G TP+ NG+SER++R +++M +++S+A +P ++W YA AVY++
Subjt: SQLEDGTLPLCESCLEGKMTKRPFTGKGYRANEPLELKNMEYLSALG---------TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVYIL
Query: NVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCPAH
N P+ + ++PF+ G+ + +++GC +
Subjt: NVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCPAH
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 6.2e-37 | 33.6 | Show/hide |
Query: EDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILL
++P T+ +A + W AMD E+ +M W++ LP KPIGCKW+YK K ++ G ++ +KARLVAKGYTQ+E +D+ ETFSPV L S++++L
Subjt: EDPLTFRQAMNDVDHDQWVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILL
Query: SIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQKNVDEPCVYKRII---------------------------NNSVAFL----------
+I+ Y++ + Q D+ AFLNG+LDE I+M P G+ A+ + + C K+ I ++ FL
Subjt: SIATFYDYEIWQKDVKTAFLNGNLDENIFMSQPEGFVAQGQEQKNVDEPCVYKRII---------------------------NNSVAFL----------
Query: VLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
++YVDDI++ N+ + ++K L + F+++ LG +Y LG++I R+
Subjt: VLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRN
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 4.3e-06 | 33.75 | Show/hide |
Query: NRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCPAHVKIVLSELSGKA
NRT+++ VRSM+ LP +F A TAV+I+N PS +++ P E+W + + R +GC A++ +L +A
Subjt: NRTLLDMVRSMMSYAQLPSSFWGYAVETAVYILNVAPSKSVS-ETPFELWKGRKVSLRHFRIWGCPAHVKIVLSELSGKA
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.1e-04 | 50 | Show/hide |
Query: FLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNP
+L+LYVDDILL G+ L + LS+ F MK LG Y LGIQI +P
Subjt: FLVLYVDDILLIGNDVEYLADIKKWLSTEFQMKYLGEAQYVLGIQIIRNP
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.3e-14 | 40.7 | Show/hide |
Query: WVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIA
W +AM E++++ N+ W LV P +GCKW++K K + G + KARLVAKG+ Q+E + + ET+SPV +IR +L++A
Subjt: WVKAMDLEMESMYFNQVWDLVDLPEGVKPIGCKWIYKRKRDTAGKVQTFKARLVAKGYTQKEEVDYEETFSPVAMLKSIRILLSIA
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