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Lag0015615 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015615
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr12:17712837..17715437
RNA-Seq ExpressionLag0015615
SyntenyLag0015615
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013762.1 hypothetical protein SDJN02_23929 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1879.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        VSE+DLDEEEV K SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE R CKKLEKAKEK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
XP_004138487.2 E3 ubiquitin-protein ligase TRAIP isoform X1 [Cucumis sativus]5.8e-1979.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        +SE+DLDEEEVLK SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE RSCKKLEKA EK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
XP_022958832.1 uncharacterized protein LOC111459984 isoform X2 [Cucurbita moschata]2.9e-1879.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        VSE+DLDEEEV K SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE R CKKLEKAKEK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
XP_031744064.1 uncharacterized protein LOC101218841 isoform X2 [Cucumis sativus]5.8e-1979.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        +SE+DLDEEEVLK SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE RSCKKLEKA EK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
XP_038906710.1 uncharacterized protein LOC120092637 [Benincasa hispida]1.3e-1879.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        VSE+DLDEEEVLK SSLG GA+N    DILRKSLVL NRSYKELM KCNLL RGE RSCKKLEKA EK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
TrEMBL top hitse value%identityAlignment
A0A0A0K7I6 Uncharacterized protein2.8e-1979.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        +SE+DLDEEEVLK SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE RSCKKLEKA EK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
A0A1S3C7C7 E3 ubiquitin-protein ligase TRAIP-like1.8e-1878.38Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        +SE+DLDEEEVLK SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE RSCKKLEKA  K N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
A0A5D3CRM0 E3 ubiquitin-protein ligase TRAIP-like1.8e-1878.38Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        +SE+DLDEEEVLK SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE RSCKKLEKA  K N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
A0A6J1H2X0 uncharacterized protein LOC111459984 isoform X21.4e-1879.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        VSE+DLDEEEV K SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE R CKKLEKAKEK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
A0A6J1H385 uncharacterized protein LOC111459984 isoform X11.4e-1879.73Show/hide
Query:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
        VSE+DLDEEEV K SSLGSGA+N    DILRKSLVL NRSYKELM KCNLL RGE R CKKLEKAKEK N LKV
Subjt:  VSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01245.1 FUNCTIONS IN: molecular_function unknown7.4e-0464.71Show/hide
Query:  SYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLK
        SYKEL+ KCN L RGE +S +KLEKA EK   LK
Subjt:  SYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLK
AT4G01270.1 RING/U-box superfamily protein1.1e-1254.55Show/hide
Query:  RTSLKENEPAILKSRVSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLK
        RT     E A LK  VS+L L+E++VLK + LG+ A      D L KSLV+ NRSYKEL+ KCN L RGE RS +KLEKA EK   LK
Subjt:  RTSLKENEPAILKSRVSELDLDEEEVLKFSSLGSGANN----DILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTGGAAAAAAATTGAAATCGAATGGGTCAAAGATCGTAGGAATTAGAACTTCATTGAAGGAAAACGAACCAGCAATTCTCAAATCGAGGGTATCTGAATTGGA
TCTTGATGAAGAAGAGGTTCTAAAGTTTTCTTCATTGGGGAGTGGAGCAAATAATGACATTCTAAGGAAATCCTTGGTTCTGTGTAATAGGAGTTATAAAGAACTGATGA
CAAAGTGCAATCTTCTTAGAAGGGGAGAGACTCGCTCTTGTAAGAAACTTGAGAAGGCAAAAGAGAAAAGAAATAATCTGAAGGTGTATAAGTGTGCTGCTGATCGACGG
TTGCTTTTTAGGACGATATTGTTATTGGAGCGTGCAGTAGTGGCAATATGGATATACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTGGAAAAAAATTGAAATCGAATGGGTCAAAGATCGTAGGAATTAGAACTTCATTGAAGGAAAACGAACCAGCAATTCTCAAATCGAGGGTATCTGAATTGGA
TCTTGATGAAGAAGAGGTTCTAAAGTTTTCTTCATTGGGGAGTGGAGCAAATAATGACATTCTAAGGAAATCCTTGGTTCTGTGTAATAGGAGTTATAAAGAACTGATGA
CAAAGTGCAATCTTCTTAGAAGGGGAGAGACTCGCTCTTGTAAGAAACTTGAGAAGGCAAAAGAGAAAAGAAATAATCTGAAGGTGTATAAGTGTGCTGCTGATCGACGG
TTGCTTTTTAGGACGATATTGTTATTGGAGCGTGCAGTAGTGGCAATATGGATATACTAG
Protein sequenceShow/hide protein sequence
MGIGKKLKSNGSKIVGIRTSLKENEPAILKSRVSELDLDEEEVLKFSSLGSGANNDILRKSLVLCNRSYKELMTKCNLLRRGETRSCKKLEKAKEKRNNLKVYKCAADRR
LLFRTILLLERAVVAIWIY