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Lag0015622 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015622
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr12:17877621..17878148
RNA-Seq ExpressionLag0015622
SyntenyLag0015622
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]5.5e-1233.33Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL
        +PT+HD+T+S +R+ +LYCI+KG +INVG +I  EI  C  +  GKLFF  LIT+ C+   +    DE+                    + RK   S   
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL

Query:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERD
          P       +PS  ++ T   P  E L+       Q+ E L+T+W Y +ERD
Subjt:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERD

MCI09484.1 hypothetical protein [Trifolium medium]2.7e-1135.95Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNNIQRKDK
        MPTTH+ T++  R++LL+CI+ G +INVG II  EI+ C  K +  G L+F  LIT+LC++  + V G+DE    F+PT   D   I  L + N  RK +
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNNIQRKDK

Query:  ASTSLVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAY
               P + +S A+ SQ              A+   +  + R+N++TYWA+
Subjt:  ASTSLVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAY

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-1030.86Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL
        +PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  +  G LFF SLIT+LC+  +     +EE+      ID   + ++ Q       +  +S 
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL

Query:  VTPTSGSSMASPSQHSSFTG-PSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIRE
           T+ S+  +              S+     YH    L    +  + +WAY+KERD A+++
Subjt:  VTPTSGSSMASPSQHSSFTG-PSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIRE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.7e-1332.4Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTS
        +PTTH  T+S DR++LLY ++ G  INVG +I  EI AC  + +G LFF SLITQLC+  +     +EE+      ID   + ++ Q+   +   + STS
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTS

Query:  LVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIREFYLSIAPSIASIFPNSP
          T  S S                 S+     YH    L    +  + +WAY+KERD A+++   +        FP  P
Subjt:  LVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIREFYLSIAPSIASIFPNSP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.4e-1031.65Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL
        +PTTH   +S DR++LL+ ++ G  INVG +I  EI AC  +  G LFF SLIT+LC+    +   +EE+      ID   + ++ Q       +  T  
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL

Query:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERDEAIRE
            S S  A+ S   +        +AL     Q +   +  + +WAY+KERD A+++
Subjt:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERDEAIRE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)6.6e-1130.86Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL
        +PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  +  G LFF SLIT+LC+  +     +EE+      ID   + ++ Q       +  +S 
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL

Query:  VTPTSGSSMASPSQHSSFTG-PSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIRE
           T+ S+  +              S+     YH    L    +  + +WAY+KERD A+++
Subjt:  VTPTSGSSMASPSQHSSFTG-PSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIRE

A0A2P5CEY2 Uncharacterized protein8.3e-1432.4Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTS
        +PTTH  T+S DR++LLY ++ G  INVG +I  EI AC  + +G LFF SLITQLC+  +     +EE+      ID   + ++ Q+   +   + STS
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTS

Query:  LVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIREFYLSIAPSIASIFPNSP
          T  S S                 S+     YH    L    +  + +WAY+KERD A+++   +        FP  P
Subjt:  LVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQ---LDQIRENLRTYWAYAKERDEAIREFYLSIAPSIASIFPNSP

A0A2P5DXM3 Uncharacterized protein6.6e-1131.65Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL
        +PTTH   +S DR++LL+ ++ G  INVG +I  EI AC  +  G LFF SLIT+LC+    +   +EE+      ID   + ++ Q       +  T  
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL

Query:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERDEAIRE
            S S  A+ S   +        +AL     Q +   +  + +WAY+KERD A+++
Subjt:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERDEAIRE

A0A392PCH7 Uncharacterized protein1.3e-1135.95Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNNIQRKDK
        MPTTH+ T++  R++LL+CI+ G +INVG II  EI+ C  K +  G L+F  LIT+LC++  + V G+DE    F+PT   D   I  L + N  RK +
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWA--GKLFFRSLITQLCQRVKI-VPGKDEERHFFKPT--IDLSLIGKLQQNNIQRKDK

Query:  ASTSLVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAY
               P + +S A+ SQ              A+   +  + R+N++TYWA+
Subjt:  ASTSLVTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAY

A0A7J6FZ22 Uncharacterized protein2.7e-1233.33Show/hide
Query:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL
        +PT+HD+T+S +R+ +LYCI+KG +INVG +I  EI  C  +  GKLFF  LIT+ C+   +    DE+                    + RK   S   
Subjt:  MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSL

Query:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERD
          P       +PS  ++ T   P  E L+       Q+ E L+T+W Y +ERD
Subjt:  VTPTSGSSMASPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCCACGATAACACGATCTCAGTAGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACGTAGGGAACATTATCAGGGATGAGATTTT
AGCCTGTGGGAGAAAATGGGCAGGCAAGCTTTTCTTTCGATCGCTTATCACCCAACTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCA
AGCCGACCATTGACCTGTCCTTGATTGGGAAGCTCCAGCAGAACAACATCCAGAGGAAAGACAAAGCCTCCACATCTCTGGTCACTCCGACATCAGGGTCGAGCATGGCT
TCTCCATCCCAGCACAGTTCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCACCAGCTAGATCAAATTAGGGAGAATCTGAGAACATATTGGGC
ATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCTCCAAGTATTGCTTCGATCTTTCCCAATTCCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCCACGATAACACGATCTCAGTAGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACGTAGGGAACATTATCAGGGATGAGATTTT
AGCCTGTGGGAGAAAATGGGCAGGCAAGCTTTTCTTTCGATCGCTTATCACCCAACTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCA
AGCCGACCATTGACCTGTCCTTGATTGGGAAGCTCCAGCAGAACAACATCCAGAGGAAAGACAAAGCCTCCACATCTCTGGTCACTCCGACATCAGGGTCGAGCATGGCT
TCTCCATCCCAGCACAGTTCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCACCAGCTAGATCAAATTAGGGAGAATCTGAGAACATATTGGGC
ATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCTCCAAGTATTGCTTCGATCTTTCCCAATTCCCCTTAG
Protein sequenceShow/hide protein sequence
MPTTHDNTISVDRVMLLYCIMKGLEINVGNIIRDEILACGRKWAGKLFFRSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSLVTPTSGSSMA
SPSQHSSFTGPSPSSEALAIAYHQLDQIRENLRTYWAYAKERDEAIREFYLSIAPSIASIFPNSP