CuGenDBv2

Gene ID	Lag0015632
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Transposase
Genome location	chr12:18157992..18159336
RNA-Seq Expression	Lag0015632
Synteny	Lag0015632
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041982.1 uncharacterized protein E6C27_scaffold67G004190 [Cucumis melo var. makuwa]

1.0e-38

54.6

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSS ASH+RP+KEQL QAHLYVLENTND                              VATELE PNN I DTLRWISHGP P+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
        YNTE RDG  NV NSG LL   S+D +S+  D+DV   +   ETS +++ RGPTTMI L QI    +R V++YN
Subjt:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

KAA0053312.1 transposase [Cucumis melo var. makuwa]

1.3e-30

56.12

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND-----------------------------------------VATELELPNNMISDTLRWISHGPSPTVI
        IGRPSSAASH+RP+KEQL QAHLYVLENTND                                         VATELE PNN ISDTLRWISHGPSP+VI
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND-----------------------------------------VATELELPNNMISDTLRWISHGPSPTVI

Query:  TYLSYVLNGVRYNTELRDGSRNVQNSGYLLMASEDDVSL
        TY SYV+NG+RYNTE RDG RNVQNSG  + +SE D  +
Subjt:  TYLSYVLNGVRYNTELRDGSRNVQNSGYLLMASEDDVSL

KAA0067725.1 uncharacterized protein E6C27_scaffold352G00380 [Cucumis melo var. makuwa]

2.1e-31

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSSAASH+RP+KEQL QAHLYVLENTND                              VATELE P N IS+TLRWISHGPSP+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLLMASEDDVS-----------------------------------LHGDDDVQ-------SENNIP-----------------
        YNTE R G RNVQNS   L+A+   +S                                   L  DD++        S NN+P                 
Subjt:  YNTELRDGSRNVQNSGYLLMASEDDVS-----------------------------------LHGDDDVQ-------SENNIP-----------------

Query:  ------------------ETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
                          ETS +R+ RGPTTMI LTQI    +R V++YN
Subjt:  ------------------ETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

TYK10636.1 uncharacterized protein E5676_scaffold315G001190 [Cucumis melo var. makuwa]

1.0e-38

54.6

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSS ASH+RP+KEQL QAHLYVLENTND                              VATELE PNN I DTLRWISHGP P+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
        YNTE RDG  NV NSG LL   S+D +S+  D+DV   +   ETS +++ RGPTTMI L QI    +R V++YN
Subjt:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

TYK17918.1 uncharacterized protein E5676_scaffold306G002090 [Cucumis melo var. makuwa]

1.0e-38

54.6

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSS ASH+RP+KEQL QAHLYVLENTND                              VATELE PNN I DTLRWISHGP P+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
        YNTE RDG  NV NSG LL   S+D +S+  D+DV   +   ETS +++ RGPTTMI L QI    +R V++YN
Subjt:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEX5 Uncharacterized protein

5.0e-39

54.6

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSS ASH+RP+KEQL QAHLYVLENTND                              VATELE PNN I DTLRWISHGP P+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
        YNTE RDG  NV NSG LL   S+D +S+  D+DV   +   ETS +++ RGPTTMI L QI    +R V++YN
Subjt:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

A0A5A7UC40 Transposase

6.5e-31

56.12

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND-----------------------------------------VATELELPNNMISDTLRWISHGPSPTVI
        IGRPSSAASH+RP+KEQL QAHLYVLENTND                                         VATELE PNN ISDTLRWISHGPSP+VI
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND-----------------------------------------VATELELPNNMISDTLRWISHGPSPTVI

Query:  TYLSYVLNGVRYNTELRDGSRNVQNSGYLLMASEDDVSL
        TY SYV+NG+RYNTE RDG RNVQNSG  + +SE D  +
Subjt:  TYLSYVLNGVRYNTELRDGSRNVQNSGYLLMASEDDVSL

A0A5A7VPW2 DUF4218 domain-containing protein

1.0e-31

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSSAASH+RP+KEQL QAHLYVLENTND                              VATELE P N IS+TLRWISHGPSP+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLLMASEDDVS-----------------------------------LHGDDDVQ-------SENNIP-----------------
        YNTE R G RNVQNS   L+A+   +S                                   L  DD++        S NN+P                 
Subjt:  YNTELRDGSRNVQNSGYLLMASEDDVS-----------------------------------LHGDDDVQ-------SENNIP-----------------

Query:  ------------------ETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
                          ETS +R+ RGPTTMI LTQI    +R V++YN
Subjt:  ------------------ETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

A0A5D3CJP2 Uncharacterized protein

5.0e-39

54.6

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSS ASH+RP+KEQL QAHLYVLENTND                              VATELE PNN I DTLRWISHGP P+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
        YNTE RDG  NV NSG LL   S+D +S+  D+DV   +   ETS +++ RGPTTMI L QI    +R V++YN
Subjt:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

A0A5D3D2X4 Uncharacterized protein

5.0e-39

54.6

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Query:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR
        IGRPSS ASH+RP+KEQL QAHLYVLENTND                              VATELE PNN I DTLRWISHGP P+VITY SYV+NG+R
Subjt:  IGRPSSAASHMRPDKEQLKQAHLYVLENTND------------------------------VATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVR

Query:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN
        YNTE RDG  NV NSG LL   S+D +S+  D+DV   +   ETS +++ RGPTTMI L QI    +R V++YN
Subjt:  YNTELRDGSRNVQNSGYLL-MASEDDVSLHGDDDVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATTTGGGAAAATTTCTAGTAATTGGAAGACCCTCATCTGCAGCTTCTCATATGAGGCCCGACAAGGAACAACTAAAGCAAGCTCATTTGTATGTTCTAGAAAATAC
AAATGATGTTGCTACAGAGCTGGAATTACCAAACAATATGATTTCAGATACGTTGAGGTGGATATCACATGGCCCTTCGCCCACTGTGATAACCTACTTAAGTTATGTAC
TGAATGGTGTTCGCTATAATACAGAATTACGAGATGGCTCTCGTAATGTGCAAAATAGTGGATATCTATTGATGGCTAGTGAAGATGATGTATCACTCCATGGTGATGAT
GATGTGCAGAGTGAAAACAATATTCCTGAGACATCATGTAAGCGAGCTACACGTGGTCCTACTACCATGATTGAGCTCACTCAAATAAGGAGAAAGACGGATCGCAAAGT
AATTGAATACAATGCACTATGA

mRNA sequence

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Protein sequence

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MDLGKFLVIGRPSSAASHMRPDKEQLKQAHLYVLENTNDVATELELPNNMISDTLRWISHGPSPTVITYLSYVLNGVRYNTELRDGSRNVQNSGYLLMASEDDVSLHGDD
DVQSENNIPETSCKRATRGPTTMIELTQIRRKTDRKVIEYNAL

Lag0015632 (gene) of Sponge gourd (AG-4) v1 genome