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Lag0015640 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015640
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:18439391..18439937
RNA-Seq ExpressionLag0015640
SyntenyLag0015640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047641.1 uncharacterized protein E6C27_scaffold115G001240 [Cucumis melo var. makuwa]1.8e-1944.22Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV
        MAEG TFSLVI VLANIY  L QI+ ++ S+G S ACF +HYV+ WLA Y N HY      RGP MVEF  E                           V
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV

Query:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV
           W L LIVL+ L  NLDF     +L E++P+A L N    WMI V
Subjt:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]5.6e-2646.26Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV
        MAEG TFSL I VLANIY GL QI+ ++ S+G S  CF +HYV+ WLA Y N HY      RGP MVEF GEGGAKY+ + + R+HIHK  +   +    
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV

Query:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV
        G                  + +VP +LSE++P+A L N+   WMICV
Subjt:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV

KAA0060136.1 uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]2.3e-1957.95Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIH
        MAEG TFSL I +LANIY GL QI+  + S+G S ACF +HYV+ WLA Y N +Y      RGP MVEF GEGGAKY+ + + R HIH
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIH

TYK08451.1 uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]9.9e-2338.46Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHK-----------
        MAEG TFSL I VLANIY GL QI+  + S+G S ACF +HYV+ WLA Y N +Y      RGP MVEF GEGGAKY+ + + R HIHK           
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHK-----------

Query:  AFDHASYLHDVG--LRWSLKLIVLVDLANNLD----------------------FTNVPNNLSEEVPEATLDNILRLWMICV
        A +    L D G  + W+    + +                             + +VP +L +++P+A L N+   WMICV
Subjt:  AFDHASYLHDVG--LRWSLKLIVLVDLANNLD----------------------FTNVPNNLSEEVPEATLDNILRLWMICV

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.5e-2338.46Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHK-----------
        MAEG TFSL + VLANIY GL Q++ ++ S+G S ACF +HYV+ WLA Y N HY      RGP MVEF GEGGAKY+ + + R HIHK           
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHK-----------

Query:  AFDHASYLHDVG--LRWSLKLIVLVD---LANNLD-------------------FTNVPNNLSEEVPEATLDNILRLWMICV
          +    L D G  + W+    + +    L++                      + +VP +L EE+PEA   N+   WMIC+
Subjt:  AFDHASYLHDVG--LRWSLKLIVLVD---LANNLD-------------------FTNVPNNLSEEVPEATLDNILRLWMICV

TrEMBL top hitse value%identityAlignment
A0A5A7T019 PMD domain-containing protein1.9e-1939.74Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV
        MA G  +SL + VLANIYHGLG I KAS  +GR +  F +HYV+ WLA+Y   HY +  + RGP M  F GEG + YF +++ R  IH     A      
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV

Query:  GLRWSLKLIVLVDLANN----LDFTNVPNNLSEEVPEATLDNILRLWMICV
         ++   K   +VD  ++    + + ++PN++    P  TLDNIL  W IC+
Subjt:  GLRWSLKLIVLVDLANN----LDFTNVPNNLSEEVPEATLDNILRLWMICV

A0A5A7U231 Uncharacterized protein8.5e-2044.22Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV
        MAEG TFSLVI VLANIY  L QI+ ++ S+G S ACF +HYV+ WLA Y N HY      RGP MVEF  E                           V
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV

Query:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV
           W L LIVL+ L  NLDF     +L E++P+A L N    WMI V
Subjt:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV

A0A5A7U4C3 Uncharacterized protein2.7e-2646.26Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV
        MAEG TFSL I VLANIY GL QI+ ++ S+G S  CF +HYV+ WLA Y N HY      RGP MVEF GEGGAKY+ + + R+HIHK  +   +    
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDV

Query:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV
        G                  + +VP +LSE++P+A L N+   WMICV
Subjt:  GLRWSLKLIVLVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV

A0A5A7V0Y4 Uncharacterized protein1.1e-1957.95Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIH
        MAEG TFSL I +LANIY GL QI+  + S+G S ACF +HYV+ WLA Y N +Y      RGP MVEF GEGGAKY+ + + R HIH
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIH

A0A5D3C9B7 Uncharacterized protein4.8e-2338.46Show/hide
Query:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHK-----------
        MAEG TFSL I VLANIY GL QI+  + S+G S ACF +HYV+ WLA Y N +Y      RGP MVEF GEGGAKY+ + + R HIHK           
Subjt:  MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHK-----------

Query:  AFDHASYLHDVG--LRWSLKLIVLVDLANNLD----------------------FTNVPNNLSEEVPEATLDNILRLWMICV
        A +    L D G  + W+    + +                             + +VP +L +++P+A L N+   WMICV
Subjt:  AFDHASYLHDVG--LRWSLKLIVLVDLANNLD----------------------FTNVPNNLSEEVPEATLDNILRLWMICV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGGTTTGACTTTTAGTCTTGTTATTCTAGTTTTGGCTAATATTTATCATGGATTGGGCCAGATTTATAAAGCGTCTCCTTCGGTAGGACGTTCCGAAGCTTG
TTTTCTAGTGCATTATGTTTACGTTTGGCTTGCTTATTATTTGAACATGCATTATGCAGTTCTAGAAAAAGGTAGGGGCCCAATGATGGTTGAGTTTTTCGGAGAGGGTG
GAGCTAAATACTTTGACGATTTTGACACTCGTGTACATATTCATAAAGCATTTGATCATGCTTCTTATCTTCACGATGTGGGTCTTCGATGGTCATTGAAGCTTATAGTC
CTTGTCGATTTAGCCAACAATTTGGATTTTACCAACGTGCCAAACAATCTAAGTGAAGAAGTTCCTGAAGCCACCTTAGATAATATATTGCGTCTTTGGATGATATGTGT
TTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAGGTTTGACTTTTAGTCTTGTTATTCTAGTTTTGGCTAATATTTATCATGGATTGGGCCAGATTTATAAAGCGTCTCCTTCGGTAGGACGTTCCGAAGCTTG
TTTTCTAGTGCATTATGTTTACGTTTGGCTTGCTTATTATTTGAACATGCATTATGCAGTTCTAGAAAAAGGTAGGGGCCCAATGATGGTTGAGTTTTTCGGAGAGGGTG
GAGCTAAATACTTTGACGATTTTGACACTCGTGTACATATTCATAAAGCATTTGATCATGCTTCTTATCTTCACGATGTGGGTCTTCGATGGTCATTGAAGCTTATAGTC
CTTGTCGATTTAGCCAACAATTTGGATTTTACCAACGTGCCAAACAATCTAAGTGAAGAAGTTCCTGAAGCCACCTTAGATAATATATTGCGTCTTTGGATGATATGTGT
TTAA
Protein sequenceShow/hide protein sequence
MAEGLTFSLVILVLANIYHGLGQIYKASPSVGRSEACFLVHYVYVWLAYYLNMHYAVLEKGRGPMMVEFFGEGGAKYFDDFDTRVHIHKAFDHASYLHDVGLRWSLKLIV
LVDLANNLDFTNVPNNLSEEVPEATLDNILRLWMICV