| GenBank top hits | e value | %identity | Alignment |
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| AQY61295.1 Pol [Coffea arabica] | 1.3e-33 | 41.56 | Show/hide |
Query: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEIL--------NVTTHN----------
+AF D+K+VTKSHIPA N P KID+P +Q+ NES R KRGRP+GSKDKNPRK++ + +++ + D + PEE+ N T N
Subjt: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEIL--------NVTTHN----------
Query: --------------NIEEGQIPEDNNE-------------------------------------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAH
NI + ED + + T E KPVGYKWVF+RKRNEKNE+ RYKARL A
Subjt: --------------NIEEGQIPEDNNE-------------------------------------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAH
Query: GFSQRAGIDYEETYSPLVDAITLRYLTDLTV
GFSQR G DY+ETYSP+VDAIT RYL V
Subjt: GFSQRAGIDYEETYSPLVDAITLRYLTDLTV
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| KAA0046643.1 hypothetical protein E6C27_scaffold427G00020 [Cucumis melo var. makuwa] | 3.0e-33 | 51.57 | Show/hide |
Query: AMGPSSQVRSSSGCIVNGIRFHTISRDNRRVTQNSGVMVLGEEEGEG-DEMNFY--------RKQVFFLNDPKHGRNWKVVQVVQNKRLWDVPEVENHGN
AMGPS VR +GCIV GIRFHTI D+RR TQNSG+MV+GE + G + NFY + F+++DPK+G NWKVVQV+QNKR+WDVPEVE+ N
Subjt: AMGPSSQVRSSSGCIVNGIRFHTISRDNRRVTQNSGVMVLGEEEGEG-DEMNFY--------RKQVFFLNDPKHGRNWKVVQVVQNKRLWDVPEVENHGN
Query: DQLELLEVERRLRVDESIEESTLCRDDVDPMVVEEQISQTHKNDDFINDEEEDVETSTE
D + +LEV +VD+ IE+ TLCR+DVDP +VE + + H D+FI+D +E + +++
Subjt: DQLELLEVERRLRVDESIEESTLCRDDVDPMVVEEQISQTHKNDDFINDEEEDVETSTE
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| KAF3653611.1 putative auxin-induced in root cultures protein 12-like [Capsicum annuum] | 2.0e-37 | 54.24 | Show/hide |
Query: MLNAFTDAKKVTKSHIPAANTPSKIDIPTQQVI--ITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVID----------NVDIPEEILNVTTHNNIEE
M +AFTD K++TKS+IPAAN P +I++P + I +ES TR KRGRP+ SKDKNPRKR N+++++I N DIPEEI T N EE
Subjt: MLNAFTDAKKVTKSHIPAANTPSKIDIPTQQVI--ITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVID----------NVDIPEEILNVTTHNNIEE
Query: GQIPEDNNE------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYL
I NE + T + KPVGYKWVF+RKRN+KNE+ RYKARL A FSQR G+DYEETYSP++DAIT RYL
Subjt: GQIPEDNNE------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYL
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| KAG7552425.1 Zinc finger SWIM-type [Arabidopsis thaliana x Arabidopsis arenosa] | 7.1e-35 | 47.2 | Show/hide |
Query: NAFTDAKKVTKSHIPAANTPSKIDIPTQ--QVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTH--NNIEEGQIPEDNNEI
+AF D K VTKS+IPAAN P++I+IP + + T ES TR KRGRP+G+KDKNPRKRK V D I E IL T H N+ +E PE N+EI
Subjt: NAFTDAKKVTKSHIPAANTPSKIDIPTQ--QVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTH--NNIEEGQIPEDNNEI
Query: S--------------------------------------------------TLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYS
S T ED +PVGYKWVF+RKRNE+NE+TRYKARL A GFSQR GIDYEETYS
Subjt: S--------------------------------------------------TLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYS
Query: PLVDAITLRYLTDL
P++DAIT R+L L
Subjt: PLVDAITLRYLTDL
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| KAG7556635.1 Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis suecica] | 7.1e-35 | 47.2 | Show/hide |
Query: NAFTDAKKVTKSHIPAANTPSKIDIPTQ--QVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTH--NNIEEGQIPEDNNEI
+AF D K VTKS+IPAAN P++I+IP + + T ES TR KRGRP+G+KDKNPRKRK V D I E IL T H N+ +E PE N+EI
Subjt: NAFTDAKKVTKSHIPAANTPSKIDIPTQ--QVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTH--NNIEEGQIPEDNNEI
Query: S--------------------------------------------------TLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYS
S T ED +PVGYKWVF+RKRNE+NE+TRYKARL A GFSQR GIDYEETYS
Subjt: S--------------------------------------------------TLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYS
Query: PLVDAITLRYLTDL
P++DAIT R+L L
Subjt: PLVDAITLRYLTDL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1U9WYD5 Pol | 2.5e-33 | 41.13 | Show/hide |
Query: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEIL--------NVTTHNNI--------
+AF D+K+VTKSHIPA N P KID+P +Q+ NES R KRGRP+GSKDKNPRK++ + +++ + D + PEE+ N T N+I
Subjt: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEIL--------NVTTHNNI--------
Query: -----------------------EEGQIPEDNNE------------------------------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAH
+E P +E + T E KPVGYKWVF+RKRNEKNE+ RYKARL A
Subjt: -----------------------EEGQIPEDNNE------------------------------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAH
Query: GFSQRAGIDYEETYSPLVDAITLRYLTDLTV
GFSQR DY+ETYSP+VDAIT RYL V
Subjt: GFSQRAGIDYEETYSPLVDAITLRYLTDLTV
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| A0A1U9WYE0 Pol | 6.5e-34 | 41.56 | Show/hide |
Query: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEIL--------NVTTHN----------
+AF D+K+VTKSHIPA N P KID+P +Q+ NES R KRGRP+GSKDKNPRK++ + +++ + D + PEE+ N T N
Subjt: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEIL--------NVTTHN----------
Query: --------------NIEEGQIPEDNNE-------------------------------------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAH
NI + ED + + T E KPVGYKWVF+RKRNEKNE+ RYKARL A
Subjt: --------------NIEEGQIPEDNNE-------------------------------------ISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAH
Query: GFSQRAGIDYEETYSPLVDAITLRYLTDLTV
GFSQR G DY+ETYSP+VDAIT RYL V
Subjt: GFSQRAGIDYEETYSPLVDAITLRYLTDLTV
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| A0A2N9FK49 Reverse transcriptase Ty1/copia-type domain-containing protein | 6.2e-37 | 50.25 | Show/hide |
Query: NAFTDAKKVTKSHIPAANTPSKIDIPTQQV--IITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTHNNI--------------
+ FTD+KK+ KSHIPAAN P++I++P Q+ I NES TR KRGRP+G+KDK PRKRK+ Q V PEE + + NI
Subjt: NAFTDAKKVTKSHIPAANTPSKIDIPTQQV--IITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTHNNI--------------
Query: -------------EEGQIPEDNNEIS----------TLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLT
EE Q+PE N+EIS T E PVGYKWVF+RKRNEKNE+ RYKARL A GFSQR GIDYEETYSP++DAIT R+L L
Subjt: -------------EEGQIPEDNNEIS----------TLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLT
Query: V
V
Subjt: V
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| A0A438I8W9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.5e-33 | 44.76 | Show/hide |
Query: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTHNNIEEGQI-----------
+AF D KKVTKSHIPAANTP++ID+P Q +TNES R KRGRP+GSKD PRKR+ + + + + + ++ + +EE QI
Subjt: NAFTDAKKVTKSHIPAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTHNNIEEGQI-----------
Query: -------------PEDNN------------------------EISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAI
PED + + T ED KPVGYKWVF+RKRNE NE+ RYKARL A GFSQR G+DYEETYSP++DAI
Subjt: -------------PEDNN------------------------EISTLEDAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAI
Query: TLRYLTDLTV
T R+L L V
Subjt: TLRYLTDLTV
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| A0A5D3D342 DUF4218 domain-containing protein | 1.4e-33 | 51.57 | Show/hide |
Query: AMGPSSQVRSSSGCIVNGIRFHTISRDNRRVTQNSGVMVLGEEEGEG-DEMNFY--------RKQVFFLNDPKHGRNWKVVQVVQNKRLWDVPEVENHGN
AMGPS VR +GCIV GIRFHTI D+RR TQNSG+MV+GE + G + NFY + F+++DPK+G NWKVVQV+QNKR+WDVPEVE+ N
Subjt: AMGPSSQVRSSSGCIVNGIRFHTISRDNRRVTQNSGVMVLGEEEGEG-DEMNFY--------RKQVFFLNDPKHGRNWKVVQVVQNKRLWDVPEVENHGN
Query: DQLELLEVERRLRVDESIEESTLCRDDVDPMVVEEQISQTHKNDDFINDEEEDVETSTE
D + +LEV +VD+ IE+ TLCR+DVDP +VE + + H D+FI+D +E + +++
Subjt: DQLELLEVERRLRVDESIEESTLCRDDVDPMVVEEQISQTHKNDDFINDEEEDVETSTE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.5e-06 | 31.82 | Show/hide |
Query: IDIPTQQ--VIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIP---EEILNVTTHNNIEEGQIPEDN----NEISTL----EDAKPVGYKW
ID PT+ + I N + R K + +++ KVV N + + + D+P +EI ++ EE E N N T+ E+ V +W
Subjt: IDIPTQQ--VIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIP---EEILNVTTHNNIEEGQIPEDN----NEISTL----EDAKPVGYKW
Query: VFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLTVK
VF K NE RYKARL A GF+Q+ IDYEET++P+ + R++ L ++
Subjt: VFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLTVK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-04 | 29.6 | Show/hide |
Query: KDKNPR--KRKVVNNQNDVIDNVDIPEEILNVTTH---NNI-----EEGQIPEDNNEISTLE---DAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQ
+ + PR R+ + + +I + PE + V +H N + EE + + N +E +P+ KWVF K++ ++ RYKARL GF Q
Subjt: KDKNPR--KRKVVNNQNDVIDNVDIPEEILNVTTH---NNI-----EEGQIPEDNNEISTLE---DAKPVGYKWVFIRKRNEKNEVTRYKARLFAHGFSQ
Query: RAGIDYEETYSPLVDAITLRYLTDL
+ GID++E +SP+V ++R + L
Subjt: RAGIDYEETYSPLVDAITLRYLTDL
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.6e-05 | 40.58 | Show/hide |
Query: VGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLT--VKSLTCISWM
+G KWVF K + + R KARL A GF Q GI + ETYSP+V T+R + ++ ++ I+WM
Subjt: VGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLT--VKSLTCISWM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-08 | 43.1 | Show/hide |
Query: VGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLTV
VG +W+F +K N + RYKARL A G++QR G+DY ET+SP++ + ++R + + V
Subjt: VGYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLTV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.2e-06 | 26.75 | Show/hide |
Query: PAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTHNNIEEGQIPEDNNEIS--TLEDAKP-------V
P P I + Q + T+ ATR K G ++ + N++ P + + + E N +I T + P V
Subjt: PAANTPSKIDIPTQQVIITNESATRQKRGRPMGSKDKNPRKRKVVNNQNDVIDNVDIPEEILNVTTHNNIEEGQIPEDNNEIS--TLEDAKP-------V
Query: GYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLTV
G +W+F +K N + RYKARL A G++QR G+DY ET+SP++ + ++R + + V
Subjt: GYKWVFIRKRNEKNEVTRYKARLFAHGFSQRAGIDYEETYSPLVDAITLRYLTDLTV
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