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Lag0015691 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015691
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr12:20376538..20377228
RNA-Seq ExpressionLag0015691
SyntenyLag0015691
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8734433.1 Eukaryotic translation initiation factor 3 subunit I [Hibiscus syriacus]2.1e-0423.88Show/hide
Query:  KTLVPSDLKPKSAVWLHFIKNKLMHTTHDSTISVEKVMVLYNIMKGCVRGLRYFLENDEERHFFKPTIDLS----LIGKVQQNSAQRKDKTSTSIATPPL
        +T+    L+P++ +W HF+K+KL+ T+H++T+S +++  L++I+ GC   +   +         +P   L+    L+G  +    ++ + TS +  TP  
Subjt:  KTLVPSDLKPKSAVWLHFIKNKLMHTTHDSTISVEKVMVLYNIMKGCVRGLRYFLENDEERHFFKPTIDLS----LIGKVQQNSAQRKDKTSTSIATPPL

Query:  GLTPVSPPEHTPTSGPTPSSEALAFVFQQLDRIEDKWKAYWIYAKERDEAIREFHLSFAPSIAPVFPDFPQSQL-PQEEKEPDEDEDEGDERDEESSLDD
                     + P    E +    +Q++++ DK   Y+ Y K RDE +    +   P      P FP + L P E  E  ED  +    +     D+
Subjt:  GLTPVSPPEHTPTSGPTPSSEALAFVFQQLDRIEDKWKAYWIYAKERDEAIREFHLSFAPSIAPVFPDFPQSQL-PQEEKEPDEDEDEGDERDEESSLDD

Query:  E
        E
Subjt:  E
TrEMBL top hitse value%identityAlignment
A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I1.0e-0423.88Show/hide
Query:  KTLVPSDLKPKSAVWLHFIKNKLMHTTHDSTISVEKVMVLYNIMKGCVRGLRYFLENDEERHFFKPTIDLS----LIGKVQQNSAQRKDKTSTSIATPPL
        +T+    L+P++ +W HF+K+KL+ T+H++T+S +++  L++I+ GC   +   +         +P   L+    L+G  +    ++ + TS +  TP  
Subjt:  KTLVPSDLKPKSAVWLHFIKNKLMHTTHDSTISVEKVMVLYNIMKGCVRGLRYFLENDEERHFFKPTIDLS----LIGKVQQNSAQRKDKTSTSIATPPL

Query:  GLTPVSPPEHTPTSGPTPSSEALAFVFQQLDRIEDKWKAYWIYAKERDEAIREFHLSFAPSIAPVFPDFPQSQL-PQEEKEPDEDEDEGDERDEESSLDD
                     + P    E +    +Q++++ DK   Y+ Y K RDE +    +   P      P FP + L P E  E  ED  +    +     D+
Subjt:  GLTPVSPPEHTPTSGPTPSSEALAFVFQQLDRIEDKWKAYWIYAKERDEAIREFHLSFAPSIAPVFPDFPQSQL-PQEEKEPDEDEDEGDERDEESSLDD

Query:  E
        E
Subjt:  E
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACATTAGTGCCCAGTGATCTCAAGCCAAAATCAGCAGTATGGCTTCACTTTATCAAGAACAAACTGATGCACACAACCCATGACAGTACCATTTCAGTAGAGAA
GGTTATGGTTCTCTACAACATCATGAAGGGTTGTGTCAGAGGATTAAGATACTTCCTGGAAAATGATGAGGAGCGTCACTTTTTCAAGCCAACCATTGACCTATCTTTGA
TTGGGAAGGTTCAACAGAATTCTGCCCAAAGAAAGGACAAGACTTCCACTTCCATAGCTACTCCACCACTAGGGTTGACACCTGTTTCACCTCCTGAGCACACTCCTACC
TCAGGGCCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCAACAGCTAGATCGGATCGAAGACAAGTGGAAAGCTTACTGGATCTATGCTAAGGAGAGAGATGAAGC
TATTAGAGAGTTTCACCTCTCTTTTGCCCCTAGCATCGCCCCTGTGTTCCCTGACTTCCCTCAATCGCAGCTGCCTCAAGAAGAGAAAGAACCTGATGAAGATGAAGATG
AAGGAGATGAAAGAGATGAAGAGAGTTCCTTGGATGATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGACATTAGTGCCCAGTGATCTCAAGCCAAAATCAGCAGTATGGCTTCACTTTATCAAGAACAAACTGATGCACACAACCCATGACAGTACCATTTCAGTAGAGAA
GGTTATGGTTCTCTACAACATCATGAAGGGTTGTGTCAGAGGATTAAGATACTTCCTGGAAAATGATGAGGAGCGTCACTTTTTCAAGCCAACCATTGACCTATCTTTGA
TTGGGAAGGTTCAACAGAATTCTGCCCAAAGAAAGGACAAGACTTCCACTTCCATAGCTACTCCACCACTAGGGTTGACACCTGTTTCACCTCCTGAGCACACTCCTACC
TCAGGGCCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCAACAGCTAGATCGGATCGAAGACAAGTGGAAAGCTTACTGGATCTATGCTAAGGAGAGAGATGAAGC
TATTAGAGAGTTTCACCTCTCTTTTGCCCCTAGCATCGCCCCTGTGTTCCCTGACTTCCCTCAATCGCAGCTGCCTCAAGAAGAGAAAGAACCTGATGAAGATGAAGATG
AAGGAGATGAAAGAGATGAAGAGAGTTCCTTGGATGATGAATAG
Protein sequenceShow/hide protein sequence
MKTLVPSDLKPKSAVWLHFIKNKLMHTTHDSTISVEKVMVLYNIMKGCVRGLRYFLENDEERHFFKPTIDLSLIGKVQQNSAQRKDKTSTSIATPPLGLTPVSPPEHTPT
SGPTPSSEALAFVFQQLDRIEDKWKAYWIYAKERDEAIREFHLSFAPSIAPVFPDFPQSQLPQEEKEPDEDEDEGDERDEESSLDDE