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Lag0015703 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015703
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr12:20819301..20826200
RNA-Seq ExpressionLag0015703
SyntenyLag0015703
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054309.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-1573.68Show/hide
Query:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        EGKMTKRPF+ KGHRAKE LELVHSDLC PMNVKARGG+EYF +F + +S+YGY ++
Subjt:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
KAA0062799.1 gag/pol protein [Cucumis melo var. makuwa]4.8e-1675.44Show/hide
Query:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        EGKMTKRPF+EKGHRAKE LELVHSDLC PMNVKARGG+EYF +F + +S+YGY ++
Subjt:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
KAA0065400.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-1654.84Show/hide
Query:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        DA  G+++  Q+    K+ +L + E   L    +  EGKMTKRPF+EKG+RAKE LEL+HSDLC PMNVKARGG+EYF SFI+ +S+YGY ++
Subjt:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
KAG7034845.1 Molybdenum cofactor sulfurase [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1679.66Show/hide
Query:  MTNFLIAIRYSLEQGAQAYAIDIEDTERDAFTGNLSSVQVTKHHILRRNESKFLDKDHT
        M NFL  IRY+LEQGAQAYA+DIEDTERDAFTGN+ SVQVTKH +LRRNE+KFL K+HT
Subjt:  MTNFLIAIRYSLEQGAQAYAIDIEDTERDAFTGNLSSVQVTKHHILRRNESKFLDKDHT
TYK28885.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-1654.84Show/hide
Query:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        DA  G+++  Q+    K+ +L + E   L    +  EGKMTKRPF+EKG+RAKE LEL+HSDLC PMNVKARGG+EYF SFI+ +S+YGY ++
Subjt:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
TrEMBL top hitse value%identityAlignment
A0A5A7TZD0 Gag/pol protein1.1e-1573.68Show/hide
Query:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        EGKMTKRPF+ KG+RAKE LEL+HSDLC PMNVKARGG+EYF SFI+ +S+YGY ++
Subjt:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
A0A5A7ULH1 Gag/pol protein8.8e-1673.68Show/hide
Query:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        EGKMTKRPF+ KGHRAKE LELVHSDLC PMNVKARGG+EYF +F + +S+YGY ++
Subjt:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
A0A5A7VB15 Gag/pol protein2.3e-1675.44Show/hide
Query:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        EGKMTKRPF+EKGHRAKE LELVHSDLC PMNVKARGG+EYF +F + +S+YGY ++
Subjt:  EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
A0A5A7VDX8 Gag/pol protein1.4e-1654.84Show/hide
Query:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        DA  G+++  Q+    K+ +L + E   L    +  EGKMTKRPF+EKG+RAKE LEL+HSDLC PMNVKARGG+EYF SFI+ +S+YGY ++
Subjt:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
A0A5D3DZX8 Gag/pol protein1.4e-1654.84Show/hide
Query:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
        DA  G+++  Q+    K+ +L + E   L    +  EGKMTKRPF+EKG+RAKE LEL+HSDLC PMNVKARGG+EYF SFI+ +S+YGY ++
Subjt:  DAFTGNLSSVQV---TKHHILRRNESKFLDKDHT--EGKMTKRPFSEKGHRAKETLELVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWV
SwissProt top hitse value%identityAlignment
Q8LGM7 Molybdenum cofactor sulfurase9.7e-0438.03Show/hide
Query:  NQNKSLFSARFMTNFLIAIR-YSLEQGAQAYAIDIEDTERDAFTGNLSSVQVTKHHILRRNESKFLDKDHT
        + N S   +    N ++ IR Y+L +GA A+A+DIEDT         S++++T+HHI RRNE   L +  T
Subjt:  NQNKSLFSARFMTNFLIAIR-YSLEQGAQAYAIDIEDTERDAFTGNLSSVQVTKHHILRRNESKFLDKDHT
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGGTCTTCACTTTCTCTCTCGACGGTGACTGAAAGCTCTTCATATTCGACGCAGTTTAACTTGATCTCTTCGTCGTCAATCACTGAGCTCTTCATCTCCAACAC
GACCTGGGTTTTTGTTTGTTTATCTGAGGCTGTGGTGGTCGTGGGTAGCAAATTTGTGGTGGTCGTGGCTGTTCTGGCACTTTGGTTTGGTGTTTTGCTCGTTTCTAGGG
TTGAGTACTTTAGACATTTTCTTAAGCATGTCAGAGCACCATCCAGGGGATATAGCAAGGCAAGAGGACCTCTTTTGGAGTTTTTCATGGATTCTGATGCTAGCATGCCT
CAATTCCCATATGAAAAACTTGATCCTTTTTGGGTAGCTTCCTTTCCCGATAGCCTTAAAGATATTTGCATTATCTTTTGTTCCTCCAATTCGAAGGAAATGGTTGATTG
GAGCTATAATGCCATATTAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTA
GCGTCTCGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTCACAGCGTCGAGACGCTACGATAGGAAGCGTCCCGACGCTACC
GTTTTTCCTTATTCAGAACGCGCGTATAAGAGGCAGCGTCTCGACGCTAAGACGAAAAATCAGAATAAAAGCTTATTTTCGGCTAGATTCATGACAAATTTCTTAATTGC
TATAAGATATTCCCTTGAACAAGGAGCTCAAGCATATGCTATAGATATTGAAGATACAGAACGTGATGCATTCACAGGAAATCTTTCATCTGTGCAAGTAACGAAGCACC
ACATACTAAGGAGAAATGAATCCAAGTTTCTGGATAAAGATCATACAGAAGGTAAAATGACCAAACGACCTTTCTCTGAAAAAGGTCATAGAGCCAAAGAAACCCTAGAA
CTTGTGCACTCGGATCTTTGTGATCCTATGAATGTCAAAGCACGAGGAGGGTATGAATATTTCAACAGTTTTATTAATGCATTTTCACAGTATGGGTATTGTTGGGTTCC
TACATTCTGCTCCCAGTTTTGCTACGACACAGAATTTGCTCCCTCCAGTCGCCCAGCAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGGTCTTCACTTTCTCTCTCGACGGTGACTGAAAGCTCTTCATATTCGACGCAGTTTAACTTGATCTCTTCGTCGTCAATCACTGAGCTCTTCATCTCCAACAC
GACCTGGGTTTTTGTTTGTTTATCTGAGGCTGTGGTGGTCGTGGGTAGCAAATTTGTGGTGGTCGTGGCTGTTCTGGCACTTTGGTTTGGTGTTTTGCTCGTTTCTAGGG
TTGAGTACTTTAGACATTTTCTTAAGCATGTCAGAGCACCATCCAGGGGATATAGCAAGGCAAGAGGACCTCTTTTGGAGTTTTTCATGGATTCTGATGCTAGCATGCCT
CAATTCCCATATGAAAAACTTGATCCTTTTTGGGTAGCTTCCTTTCCCGATAGCCTTAAAGATATTTGCATTATCTTTTGTTCCTCCAATTCGAAGGAAATGGTTGATTG
GAGCTATAATGCCATATTAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTA
GCGTCTCGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTCACAGCGTCGAGACGCTACGATAGGAAGCGTCCCGACGCTACC
GTTTTTCCTTATTCAGAACGCGCGTATAAGAGGCAGCGTCTCGACGCTAAGACGAAAAATCAGAATAAAAGCTTATTTTCGGCTAGATTCATGACAAATTTCTTAATTGC
TATAAGATATTCCCTTGAACAAGGAGCTCAAGCATATGCTATAGATATTGAAGATACAGAACGTGATGCATTCACAGGAAATCTTTCATCTGTGCAAGTAACGAAGCACC
ACATACTAAGGAGAAATGAATCCAAGTTTCTGGATAAAGATCATACAGAAGGTAAAATGACCAAACGACCTTTCTCTGAAAAAGGTCATAGAGCCAAAGAAACCCTAGAA
CTTGTGCACTCGGATCTTTGTGATCCTATGAATGTCAAAGCACGAGGAGGGTATGAATATTTCAACAGTTTTATTAATGCATTTTCACAGTATGGGTATTGTTGGGTTCC
TACATTCTGCTCCCAGTTTTGCTACGACACAGAATTTGCTCCCTCCAGTCGCCCAGCAGCATAA
Protein sequenceShow/hide protein sequence
MCGSSLSLSTVTESSSYSTQFNLISSSSITELFISNTTWVFVCLSEAVVVVGSKFVVVVAVLALWFGVLLVSRVEYFRHFLKHVRAPSRGYSKARGPLLEFFMDSDASMP
QFPYEKLDPFWVASFPDSLKDICIIFCSSNSKEMVDWSYNAILELIGCSGREKMQRNEKSKSGEKSNLGQQQASVSTLALERLDAHIPYQIRRVKLTASRRYDRKRPDAT
VFPYSERAYKRQRLDAKTKNQNKSLFSARFMTNFLIAIRYSLEQGAQAYAIDIEDTERDAFTGNLSSVQVTKHHILRRNESKFLDKDHTEGKMTKRPFSEKGHRAKETLE
LVHSDLCDPMNVKARGGYEYFNSFINAFSQYGYCWVPTFCSQFCYDTEFAPSSRPAA