; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015704 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015704
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSingle-stranded DNA-binding protein, mitochondrial
Genome locationchr12:20978899..20980203
RNA-Seq ExpressionLag0015704
SyntenyLag0015704
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF6734224.1 hypothetical protein FQA47_013229 [Oryzias melastigma]7.3e-1130.94Show/hide
Query:  QSNRSSSQQAD-PRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVNRPIIQEDQQANRSNKSLRKQADPRDHQVSRPIIQEDQQANKPI-QQIIKPT
        Q+N+ + QQ D P +QQ NRP  K N+   + + R T++PT+Q          Q D+  N+  K       P + Q ++     DQQ NKP  QQ  KPT
Subjt:  QSNRSSSQQAD-PRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVNRPIIQEDQQANRSNKSLRKQADPRDHQVSRPIIQEDQQANKPI-QQIIKPT

Query:  GRSKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTDR-SRRSTSQQADHPRDQQVNRPIKKINKPIQEIIKSAGRSSKRINKLTSRSNRSSSQQ
         +  K N+   + + R T++P    ++Q +RP      KPT+R + R T+QQ D P +QQ ++P     KP  +  +   +++K  N+ T+R  + +++Q
Subjt:  GRSKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTDR-SRRSTSQQADHPRDQQVNRPIKKINKPIQEIIKSAGRSSKRINKLTSRSNRSSSQQ

Query:  ADPRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANRSNR
         +  R T+QQ D P +QQ N+P  + N+   R  K  T + T+Q+  +  +P  +++QQ  ++++
Subjt:  ADPRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANRSNR

KOX68120.1 Single-stranded DNA-binding protein, mitochondrial, partial [Melipona quadrifasciata]8.0e-1033.33Show/hide
Query:  PRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVNRPIIQEDQQANRSNKSLRKQADPRDHQVSRPIIQEDQQANKPIQQIIKPTGRSKKINK
        P DQQ +RP    ++   R + + TS+P DQ+     DQQ +RP    DQQ +R          P D Q SRP    DQQ ++P  Q       S+  ++
Subjt:  PRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVNRPIIQEDQQANRSNKSLRKQADPRDHQVSRPIIQEDQQANKPIQQIIKPTGRSKKINK

Query:  SAGRSSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPIKKINKPIQEIIKSAGRSSKRINKLTSR-SNRSSSQQAD
           R + + TS+P DQ+     DQQ SRP  Q+ ++P D ++ R   QQ   P DQQ +RP  +             ++S+  ++ TSR +++ +S+ AD
Subjt:  SAGRSSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPIKKINKPIQEIIKSAGRSSKRINKLTSR-SNRSSSQQAD

Query:  PRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVSRPIIQEDQQANRSNRSSSQQADPRDHQVSRPIIQEDQQANKPIQ
              QQ   P DQQ +RP    ++   R + + TS+P DQ+     DQQ SRP    DQQ +R   +  Q + P D Q SRP    DQQ ++P +
Subjt:  PRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVSRPIIQEDQQANRSNRSSSQQADPRDHQVSRPIIQEDQQANKPIQ

RUS92128.1 hypothetical protein EGW08_000152 [Elysia chlorotica]6.0e-0534.62Show/hide
Query:  AQAHMRDQQANRSIKKINKSAGRSSKRINKLTSQSNRSSSQQADPRDQQANRPI-KKINKSAGRSSKRSTSQPTDQ-EDQQVNRPIIQEDQQANRSNKSL
        +  H RD  A     K N   G+ +  I       N  +     P DQ+ NRP  ++ N+   + + R T Q T++  DQQ NRP    DQQ NR     
Subjt:  AQAHMRDQQANRSIKKINKSAGRSSKRINKLTSQSNRSSSQQADPRDQQANRPI-KKINKSAGRSSKRSTSQPTDQ-EDQQVNRPIIQEDQQANRSNKSL

Query:  RKQADPRDHQVSRPIIQEDQQANKPI-QQIIKPTGRSKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPI-
             P D Q +RP    DQQA++P  QQ  +PTG      +   R + + T++PT   DQQ SRP  Q+ N+PTD ++ R   QQ + P DQQ NRP  
Subjt:  RKQADPRDHQVSRPIIQEDQQANKPI-QQIIKPTGRSKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPI-

Query:  KKINKPIQEIIKSAGRSSKRINKLTS--RSNRSS
        ++ N+P   ++     SS R+ ++T   RS R S
Subjt:  KKINKPIQEIIKSAGRSSKRINKLTS--RSNRSS

TrEMBL top hitse value%identityAlignment
A0A0M8ZNX4 Single-stranded DNA-binding protein, mitochondrial (Fragment)3.9e-1033.33Show/hide
Query:  PRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVNRPIIQEDQQANRSNKSLRKQADPRDHQVSRPIIQEDQQANKPIQQIIKPTGRSKKINK
        P DQQ +RP    ++   R + + TS+P DQ+     DQQ +RP    DQQ +R          P D Q SRP    DQQ ++P  Q       S+  ++
Subjt:  PRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVNRPIIQEDQQANRSNKSLRKQADPRDHQVSRPIIQEDQQANKPIQQIIKPTGRSKKINK

Query:  SAGRSSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPIKKINKPIQEIIKSAGRSSKRINKLTSR-SNRSSSQQAD
           R + + TS+P DQ+     DQQ SRP  Q+ ++P D ++ R   QQ   P DQQ +RP  +             ++S+  ++ TSR +++ +S+ AD
Subjt:  SAGRSSKRSTSQPTDQE-----DQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPIKKINKPIQEIIKSAGRSSKRINKLTSR-SNRSSSQQAD

Query:  PRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVSRPIIQEDQQANRSNRSSSQQADPRDHQVSRPIIQEDQQANKPIQ
              QQ   P DQQ +RP    ++   R + + TS+P DQ+     DQQ SRP    DQQ +R   +  Q + P D Q SRP    DQQ ++P +
Subjt:  PRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQE-----DQQVSRPIIQEDQQANRSNRSSSQQADPRDHQVSRPIIQEDQQANKPIQ

A0A433UEB9 Uncharacterized protein2.9e-0534.62Show/hide
Query:  AQAHMRDQQANRSIKKINKSAGRSSKRINKLTSQSNRSSSQQADPRDQQANRPI-KKINKSAGRSSKRSTSQPTDQ-EDQQVNRPIIQEDQQANRSNKSL
        +  H RD  A     K N   G+ +  I       N  +     P DQ+ NRP  ++ N+   + + R T Q T++  DQQ NRP    DQQ NR     
Subjt:  AQAHMRDQQANRSIKKINKSAGRSSKRINKLTSQSNRSSSQQADPRDQQANRPI-KKINKSAGRSSKRSTSQPTDQ-EDQQVNRPIIQEDQQANRSNKSL

Query:  RKQADPRDHQVSRPIIQEDQQANKPI-QQIIKPTGRSKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPI-
             P D Q +RP    DQQA++P  QQ  +PTG      +   R + + T++PT   DQQ SRP  Q+ N+PTD ++ R   QQ + P DQQ NRP  
Subjt:  RKQADPRDHQVSRPIIQEDQQANKPI-QQIIKPTGRSKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQVNRPI-

Query:  KKINKPIQEIIKSAGRSSKRINKLTS--RSNRSS
        ++ N+P   ++     SS R+ ++T   RS R S
Subjt:  KKINKPIQEIIKSAGRSSKRINKLTS--RSNRSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGAGATCAACAAGCCAACCGATCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAA
CAAGCTAACAAGCCAATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCA
AGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAAATCATTAAGAAAACAGGCC
GATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGTCGATCCAAGAAGATCAACAA
GTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAA
GAAGATCAACAAGTCAGCAAGCCGATCATCCAAGAGATCAACAAGTCAATCGACCGATCAAGAAGATCAACAAGCCGATCCAAGAGATCATCAAGTCAGCAGGTCGATCA
TCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGC
CAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAG
AAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCG
ATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAATTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGAGATCAACAAGCCAACCGATCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAA
CAAGCTAACAAGCCAATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCA
AGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAAATCATTAAGAAAACAGGCC
GATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGTCGATCCAAGAAGATCAACAA
GTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAA
GAAGATCAACAAGTCAGCAAGCCGATCATCCAAGAGATCAACAAGTCAATCGACCGATCAAGAAGATCAACAAGCCGATCCAAGAGATCATCAAGTCAGCAGGTCGATCA
TCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGC
CAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAG
AAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCG
ATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAATTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAA
Protein sequenceShow/hide protein sequence
MPRGNWTQAQAHMRDQQANRSIKKINKSAGRSSKRINKLTSQSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVNRPIIQEDQQANRSNKSLRKQA
DPRDHQVSRPIIQEDQQANKPIQQIIKPTGRSKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTDRSRRSTSQQADHPRDQQVNRPIKKINKPIQEIIKSAGRS
SKRINKLTSRSNRSSSQQADPRRSTSQQADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANRSNRSSSQQADPRDHQVSRPIIQEDQQANKP
IQQIIKPTGRSKRSSIQQADHPRGSTS