; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015710 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015710
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr12:21221542..21222237
RNA-Seq ExpressionLag0015710
SyntenyLag0015710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]4.8e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]1.4e-5963.68Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNYFLESASSDA-----------SGTS---SSSSSSTVTI-REINPLYEDWMAKDHALMTLINATLSPEALAY
        SS+ KD  SP+F L+NICNLIS+RLDS+N+ L      A            GT+    +S S+T T+  + NPLYEDW+AKD ALMT+INATLSPEALAY
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNYFLESASSDA-----------SGTS---SSSSSSTVTI-REINPLYEDWMAKDHALMTLINATLSPEALAY

Query:  IVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVTFDE
        +VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VTF+E
Subjt:  IVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVTFDE

Query:  LHVLMKSEESAL
        LHVL+++EESAL
Subjt:  LHVLMKSEESAL

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]4.8e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]4.8e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

XP_016900446.1 PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]4.8e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X22.3e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X32.3e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X12.3e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

A0A5D3CLI6 T4.52.3e-6062.33Show/hide
Query:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA
        SS+ KD  SP+F L+NICNLIS+RLDS+N+                  F++  +     T++SSS+STV   + NP YEDW+AKD ALMT+INATLSPEA
Subjt:  SSSAKDLNSPMFSLTNICNLISIRLDSSNY------------------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEA

Query:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT
        LAY+VG  S K+ W+VLA+ YSS SRSN+VNLK+DLQ I KK DESID+Y+KRIKEI D+LANVS+ +NEEDL+IYALNGLP EYNTF+TSMRTRS  VT
Subjt:  LAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVT

Query:  FDELHVLMKSEESAL
        F+ELHVL+++EESAL
Subjt:  FDELHVLMKSEESAL

A0A5D3D3T6 Retrotran_gag_3 domain-containing protein4.5e-5654.98Show/hide
Query:  ASLGSSSAKDLNSPMFSLTNICNLISIRLDSSNYFL------------------------------ESASSDASGTSSSSSSSTVTIREINPLYEDWMAK
        AS  SS++K+L+SP+F LTNICNLISIRLDS+NY L                                 ++ +S T+ ++SSST  I   NP YEDW AK
Subjt:  ASLGSSSAKDLNSPMFSLTNICNLISIRLDSSNYFL------------------------------ESASSDASGTSSSSSSSTVTIREINPLYEDWMAK

Query:  DHALMTLINATLSPEALAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVE
        D A M LINATLS EAL Y+VGC+S  + W+ L RHYSS +R+NIVNLK+DLQ ISKK DE I  Y+K+IKE+ D+LAN +++V +EDL+IYALNGLP E
Subjt:  DHALMTLINATLSPEALAYIVGCQSLKEEWEVLARHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVE

Query:  YNTFKTSMRTRSGNVTFDELHVLMKSEESAL
        YN F+TSM+TRS  V+F ELH+L+KSEESAL
Subjt:  YNTFKTSMRTRSGNVTFDELHVLMKSEESAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)3.0e-0421.32Show/hide
Query:  MFSLTNICNLISIRLD--SSNY-------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEAL-AYIVGCQSLKEEWEVLA
        ++ ++NI + I + LD   SNY            S D  G          T+   N    +W  +D  +   +  TL+P+      V   + ++ W  + 
Subjt:  MFSLTNICNLISIRLD--SSNY-------FLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEAL-AYIVGCQSLKEEWEVLA

Query:  RHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVTFDELHVLMKSEESAL
          + +   +  + L ++L+      D  +  Y +++K++ D L NV   V + +L++Y LNGL  +++     ++ R    +FD+   +++ EE  L
Subjt:  RHYSSTSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVTFDELHVLMKSEESAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTTGGCTCGTCCTCTGCCAAGGATCTCAATTCGCCGATGTTTTCGTTGACGAACATCTGCAATTTAATTTCAATTCGTCTCGATTCCTCAAATTATTTTCT
TGAATCTGCTTCTTCTGATGCTTCTGGTACTTCCTCTTCGTCTTCTTCTTCAACAGTCACAATTCGTGAGATCAATCCTCTATATGAAGACTGGATGGCTAAGGATCACG
CATTGATGACTCTCATCAATGCGACTCTCTCACCTGAAGCTCTAGCTTACATCGTTGGTTGTCAATCTTTGAAGGAAGAATGGGAGGTACTGGCTCGTCACTACTCTTCT
ACCTCCCGCTCTAATATTGTGAATTTGAAGACAGATCTACAAGCTATCTCGAAGAAATCAGATGAATCGATTGACTCCTATGTCAAACGGATTAAGGAAATCAATGATAG
ATTGGCAAATGTCTCATCCGTGGTGAATGAAGAGGATCTCATGATTTATGCCTTAAATGGATTGCCAGTCGAATACAACACGTTTAAGACCTCGATGCGCACTCGTTCGG
GTAATGTTACCTTTGATGAACTTCATGTCCTTATGAAGTCTGAAGAGTCAGCTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTTGGCTCGTCCTCTGCCAAGGATCTCAATTCGCCGATGTTTTCGTTGACGAACATCTGCAATTTAATTTCAATTCGTCTCGATTCCTCAAATTATTTTCT
TGAATCTGCTTCTTCTGATGCTTCTGGTACTTCCTCTTCGTCTTCTTCTTCAACAGTCACAATTCGTGAGATCAATCCTCTATATGAAGACTGGATGGCTAAGGATCACG
CATTGATGACTCTCATCAATGCGACTCTCTCACCTGAAGCTCTAGCTTACATCGTTGGTTGTCAATCTTTGAAGGAAGAATGGGAGGTACTGGCTCGTCACTACTCTTCT
ACCTCCCGCTCTAATATTGTGAATTTGAAGACAGATCTACAAGCTATCTCGAAGAAATCAGATGAATCGATTGACTCCTATGTCAAACGGATTAAGGAAATCAATGATAG
ATTGGCAAATGTCTCATCCGTGGTGAATGAAGAGGATCTCATGATTTATGCCTTAAATGGATTGCCAGTCGAATACAACACGTTTAAGACCTCGATGCGCACTCGTTCGG
GTAATGTTACCTTTGATGAACTTCATGTCCTTATGAAGTCTGAAGAGTCAGCTCTTTAG
Protein sequenceShow/hide protein sequence
MASLGSSSAKDLNSPMFSLTNICNLISIRLDSSNYFLESASSDASGTSSSSSSSTVTIREINPLYEDWMAKDHALMTLINATLSPEALAYIVGCQSLKEEWEVLARHYSS
TSRSNIVNLKTDLQAISKKSDESIDSYVKRIKEINDRLANVSSVVNEEDLMIYALNGLPVEYNTFKTSMRTRSGNVTFDELHVLMKSEESAL