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Lag0015711 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015711
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein VTE6, chloroplastic
Genome locationchr12:21230012..21235587
RNA-Seq ExpressionLag0015711
SyntenyLag0015711
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002794 - Protein of unknown function DUF92, TMEM19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059051.1 protein VTE6 [Cucumis melo var. makuwa]1.4e-5088.52Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLEGTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_004137222.1 protein VTE6, chloroplastic isoform X1 [Cucumis sativus]7.2e-5290.98Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLEGTFA LLAAIALAFVGCLLGDVTA EAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_022142893.1 protein VTE6, chloroplastic isoform X1 [Momordica charantia]1.5e-5290.98Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVTTFKVVPRGTEGAVSLEGTFA LLAAIAL+FVGCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_031740533.1 protein VTE6, chloroplastic isoform X2 [Cucumis sativus]7.2e-5290.98Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLEGTFA LLAAIALAFVGCLLGDVTA EAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_038876750.1 protein VTE6, chloroplastic [Benincasa hispida]3.3e-5290.98Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVTTFKVVPRGTEGAVSLEGTFA LLAAIALAFV CLLGDVTAPE IVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KVG7 Uncharacterized protein3.5e-5290.98Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLEGTFA LLAAIALAFVGCLLGDVTA EAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A1S3BTA9 protein VTE6, chloroplastic6.6e-5188.52Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLEGTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A5A7UZZ0 Protein VTE66.6e-5188.52Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLEGTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A5D3CWL7 Protein VTE66.6e-5188.52Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLEGTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A6J1CPE4 protein VTE6, chloroplastic isoform X17.1e-5390.98Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVTTFKVVPRGTEGAVSLEGTFA LLAAIAL+FVGCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

SwissProt top hitse value%identityAlignment
P73555 Uncharacterized membrane protein sll08751.3e-1936.77Show/hide
Query:  SSFLLLSAATAPFTNLLQQPPAALDFSSSFAAYSYLLQRSAVWTLRCRFLSSRRRRLDDSGKAAPNLVRLFRLVCKAATGKAAPN--LNDGARRRLAAIH
        +SFLL  AA AP   LL        +      ++ L  R  +  L   F+ S   R+    K A         + +  +G+  P           L A+ 
Subjt:  SSFLLLSAATAPFTNLLQQPPAALDFSSSFAAYSYLLQRSAVWTLRCRFLSSRRRRLDDSGKAAPNLVRLFRLVCKAATGKAAPN--LNDGARRRLAAIH

Query:  SKVGGEAFAQLW-RLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANL
           G E + QLW  LG+VASF TKLSDT +SE+GK YG+ T+L+TT + VPRGTEGAVS+EGT A   A +ALA +G  +G ++    I   +A+ IA  
Subjt:  SKVGGEAFAQLW-RLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANL

Query:  GESIIGVVLQEKEGFQWISSTVI
         ES+IG  LQ K  + W+++ V+
Subjt:  GESIIGVVLQEKEGFQWISSTVI

Q58343 Uncharacterized membrane protein MJ09332.7e-0938Show/hide
Query:  LGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLL-GDVTAPEAIVCVIASQIA-NLGESIIGVVLQEK
        +G+++S     SDT SSE+G +      L+TTF+VV +GT+GA+++ GT A +L A  +   G LL GD+   + ++C  A  IA NL +S++G + + K
Subjt:  LGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLL-GDVTAPEAIVCVIASQIA-NLGESIIGVVLQEK

Q9SYM0 Protein VTE6, chloroplastic3.7e-4371.9Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGE
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGK YG+ TYL TTFK+VPRGTEGA+SLEGT A LLA+  LA VGC LG +T PEA VCV+ASQIANLGE
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGE

Query:  SIIGVVLQEKEGFQWISSTVI
        SIIG   Q+KEGF+W+++ V+
Subjt:  SIIGVVLQEKEGFQWISSTVI

Arabidopsis top hitse value%identityAlignment
AT1G78620.1 Protein of unknown function DUF92, transmembrane2.7e-4471.9Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGE
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGK YG+ TYL TTFK+VPRGTEGA+SLEGT A LLA+  LA VGC LG +T PEA VCV+ASQIANLGE
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGE

Query:  SIIGVVLQEKEGFQWISSTVI
        SIIG   Q+KEGF+W+++ V+
Subjt:  SIIGVVLQEKEGFQWISSTVI

AT1G78620.2 Protein of unknown function DUF92, transmembrane2.7e-4471.9Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGE
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGK YG+ TYL TTFK+VPRGTEGA+SLEGT A LLA+  LA VGC LG +T PEA VCV+ASQIANLGE
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGE

Query:  SIIGVVLQEKEGFQWISSTVI
        SIIG   Q+KEGF+W+++ V+
Subjt:  SIIGVVLQEKEGFQWISSTVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGCAATTCAATTGCAATTTCAAACAAACAAAAACAGGTAAAAAGTACCTGCCTTTTCTCTCTCCCCGAAGGCACTTCAACCCTAGCTCATTTCTTCTTCTCTC
AGCCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGCTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTCGGCTGTTTGGA
CTCTTCGCTGCAGATTCCTCTCTTCCCGAAGGCGACGACTGGACGACAGTGGTAAAGCGGCACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGGCGGCGACTGGT
AAGGCGGCACCAAACCTCAACGACGGAGCAAGGCGGCGACTGGCAGCTATTCATTCCAAAGTTGGGGGAGAAGCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAG
TTTTTGTACTAAACTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGTGTATGGTAGAATAACGTACCTGGTGACAACATTTAAGGTTGTTCCTCGGGGAACAGAAGGGG
CTGTCAGTCTCGAGGGAACCTTTGCTAGACTCTTAGCGGCAATCGCTCTTGCATTCGTTGGCTGTCTTTTGGGTGATGTAACTGCACCTGAAGCAATTGTATGTGTTATA
GCTTCACAGATTGCTAATCTTGGTGAAAGCATCATCGGTGTTGTCCTTCAAGAGAAGGAGGGATTTCAGTGGATTTCTTCAACTGTTATTGCCTGCTCTTATGTATCATC
GTCGCTTTATTCGTCAAGAACGATGAGTTTGAGTCTGAAAGTAGCTTGGCTGATAGCCTTGATTGGTTTAAATCTTAAGGCAACTGCAAAATTAGTAGGGCTGACCGTTG
CTTCATTCTGTTATCTGCAATTCTTTCCAGCACCTTATCACATTGATGCGACGTGCCTAATACAACAAAGATCAAGCTGCAACAAAGACTTTTTCTACAGTAAAAAATGG
CTGGAAGCTGCTGAAGACAAGTTTGCTCCCGATGCAAACAACAAGGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTGCATTAAATTTTTGTGT
CATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGCAATTCAATTGCAATTTCAAACAAACAAAAACAGGTAAAAAGTACCTGCCTTTTCTCTCTCCCCGAAGGCACTTCAACCCTAGCTCATTTCTTCTTCTCTC
AGCCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGCTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTCGGCTGTTTGGA
CTCTTCGCTGCAGATTCCTCTCTTCCCGAAGGCGACGACTGGACGACAGTGGTAAAGCGGCACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGGCGGCGACTGGT
AAGGCGGCACCAAACCTCAACGACGGAGCAAGGCGGCGACTGGCAGCTATTCATTCCAAAGTTGGGGGAGAAGCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAG
TTTTTGTACTAAACTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGTGTATGGTAGAATAACGTACCTGGTGACAACATTTAAGGTTGTTCCTCGGGGAACAGAAGGGG
CTGTCAGTCTCGAGGGAACCTTTGCTAGACTCTTAGCGGCAATCGCTCTTGCATTCGTTGGCTGTCTTTTGGGTGATGTAACTGCACCTGAAGCAATTGTATGTGTTATA
GCTTCACAGATTGCTAATCTTGGTGAAAGCATCATCGGTGTTGTCCTTCAAGAGAAGGAGGGATTTCAGTGGATTTCTTCAACTGTTATTGCCTGCTCTTATGTATCATC
GTCGCTTTATTCGTCAAGAACGATGAGTTTGAGTCTGAAAGTAGCTTGGCTGATAGCCTTGATTGGTTTAAATCTTAAGGCAACTGCAAAATTAGTAGGGCTGACCGTTG
CTTCATTCTGTTATCTGCAATTCTTTCCAGCACCTTATCACATTGATGCGACGTGCCTAATACAACAAAGATCAAGCTGCAACAAAGACTTTTTCTACAGTAAAAAATGG
CTGGAAGCTGCTGAAGACAAGTTTGCTCCCGATGCAAACAACAAGGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTGCATTAAATTTTTGTGT
CATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAG
Protein sequenceShow/hide protein sequence
MSSQFNCNFKQTKTGKKYLPFLSPRRHFNPSSFLLLSAATAPFTNLLQQPPAALDFSSSFAAYSYLLQRSAVWTLRCRFLSSRRRRLDDSGKAAPNLVRLFRLVCKAATG
KAAPNLNDGARRRLAAIHSKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVI
ASQIANLGESIIGVVLQEKEGFQWISSTVIACSYVSSSLYSSRTMSLSLKVAWLIALIGLNLKATAKLVGLTVASFCYLQFFPAPYHIDATCLIQQRSSCNKDFFYSKKW
LEAAEDKFAPDANNKDSDSNTEELELLDPSPALNFCVMFCRGSSSLMYEQDYGDRNESGMYENFCFLV