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Lag0015714 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015714
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionserine/arginine repetitive matrix protein 1
Genome locationchr12:21429951..21430460
RNA-Seq ExpressionLag0015714
SyntenyLag0015714
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575245.1 hypothetical protein SDJN03_25884, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3868.75Show/hide
Query:  LPIPTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-----QISGSDVLRALQKAAAVKEKNRAREVKEKQKEG-
        +P PT PVSAIYAK+QPP++DADN TP++S +SIKSFGHKILSA NS NP  +    KQES     QISG DVLRALQKAAAVKEKNR R+ KE++K+G 
Subjt:  LPIPTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-----QISGSDVLRALQKAAAVKEKNRAREVKEKQKEG-

Query:  PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        P TEG  S NS++ RRVRPLRI +DWGLRLTELEKRLQ+IS+ V
Subjt:  PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]2.0e-4367.07Show/hide
Query:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-----QISGSDVLRALQKA
        MWTA    P+P   RLP+PTR     PVSAIYAK+QPP++DADN TP++S +SIKSFGHKILSA NS NP  +    KQES     QISG DVLRALQKA
Subjt:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-----QISGSDVLRALQKA

Query:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        AAVKEKNR R+ KE++K+G P TEG  S NS+MNRRVRPLRI +DWGLRLTELEKRLQ+IS+ V
Subjt:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]4.5e-4367.07Show/hide
Query:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQESQ-----ISGSDVLRALQKA
        MW A    P+P   RLP+PTR     PVSAIYAK+QPP +DADN TP++S SSIKSFGHKILSA  S NP  +    KQESQ     ISG DVLRALQKA
Subjt:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQESQ-----ISGSDVLRALQKA

Query:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        AAVKEKNR R+VKE++K+G P TEG  S NS+MNRRVRPLRI +DWGLRLTELEKRLQ+IS+ V
Subjt:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

XP_023547620.1 uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo]1.4e-4165.24Show/hide
Query:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPN-----PNRKQTTPKQESQISGSDVLRALQKA
        MW A    P+P   RLP+PTR     PVSAIYAK+QPP++DADN TP++S SSIKSFGHKILSA NS N     P RKQ +  + +QISG DVLRALQKA
Subjt:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPN-----PNRKQTTPKQESQISGSDVLRALQKA

Query:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        AAVKEKNR R+ +E++K+G P TEG  S NS+MNRRVRPLRI +DWGLRL ELEKRLQ+IS+ V
Subjt:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]9.0e-4466.67Show/hide
Query:  MWTASPNPPNPFSRRLPI-----PTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNR-----KQTTPKQE-----SQISGSDVLR
        MW AS   P P   RLPI     PT PVSAIYA+SQPPK+DA NTTP+DS SSIKSFGHKILSAVNSPNP        +TTPKQE     +QISGSD+LR
Subjt:  MWTASPNPPNPFSRRLPI-----PTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNR-----KQTTPKQE-----SQISGSDVLR

Query:  ALQKAAAVKEKNRAREVKEKQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        ALQKAAAVKEKNR R+VK K+KEGP+TEG    +S+MN RVRPL+I  DWGLRL++LEKRLQ+ S+ V
Subjt:  ALQKAAAVKEKNRAREVKEKQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

TrEMBL top hitse value%identityAlignment
A0A1S3CAW4 uncharacterized protein LOC1034987866.1e-3861.73Show/hide
Query:  MWTASPNPPNPFSRRLPI-----PTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNP-NRKQTTPKQES-----QISGSDVLRALQK
        MW AS   P+P  RRLPI     P  PVS  YAKS PPK DA+NT P++S  +IKSFGHKILSAVNSP P +  QTTPK ES     QISGSDVLRALQK
Subjt:  MWTASPNPPNPFSRRLPI-----PTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNP-NRKQTTPKQES-----QISGSDVLRALQK

Query:  AAAVKEKNRAREVKEKQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISD
        AAAVKEKNR ++VKEK+K+       +   S+MN RVRPL+I  DWGLRLT+LEKRL ++S+
Subjt:  AAAVKEKNRAREVKEKQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISD

A0A5D3DMB8 Chaperone ClpB6.1e-3861.73Show/hide
Query:  MWTASPNPPNPFSRRLPI-----PTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNP-NRKQTTPKQES-----QISGSDVLRALQK
        MW AS   P+P  RRLPI     P  PVS  YAKS PPK DA+NT P++S  +IKSFGHKILSAVNSP P +  QTTPK ES     QISGSDVLRALQK
Subjt:  MWTASPNPPNPFSRRLPI-----PTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNP-NRKQTTPKQES-----QISGSDVLRALQK

Query:  AAAVKEKNRAREVKEKQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISD
        AAAVKEKNR ++VKEK+K+       +   S+MN RVRPL+I  DWGLRLT+LEKRL ++S+
Subjt:  AAAVKEKNRAREVKEKQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISD

A0A6J1DX20 serine/arginine repetitive matrix protein 16.1e-3861.96Show/hide
Query:  MWTASPNPPNPFSRRLPIPTR--PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-------QISGSDVLRALQKAA
        MW A+   P+P  RR P+PT+  P+ AIYAKS PPK+ A++ TP ++R S+KS GH ILSAV SP PN+KQ TPKQES       Q+ GSDVL ALQKAA
Subjt:  MWTASPNPPNPFSRRLPIPTR--PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-------QISGSDVLRALQKAA

Query:  AVKEKNRAREVKE-KQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        A KEKNR+R V + K+KEGPST   + QNS +NR VRPLRI SDWG RL+ELEKRLQ+ISD V
Subjt:  AVKEKNRAREVKE-KQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

A0A6J1H4Y8 uncharacterized protein LOC1114604389.7e-4467.07Show/hide
Query:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-----QISGSDVLRALQKA
        MWTA    P+P   RLP+PTR     PVSAIYAK+QPP++DADN TP++S +SIKSFGHKILSA NS NP  +    KQES     QISG DVLRALQKA
Subjt:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQES-----QISGSDVLRALQKA

Query:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        AAVKEKNR R+ KE++K+G P TEG  S NS+MNRRVRPLRI +DWGLRLTELEKRLQ+IS+ V
Subjt:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

A0A6J1L2U1 uncharacterized protein LOC1114993292.2e-4367.07Show/hide
Query:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQESQ-----ISGSDVLRALQKA
        MW A    P+P   RLP+PTR     PVSAIYAK+QPP +DADN TP++S SSIKSFGHKILSA  S NP  +    KQESQ     ISG DVLRALQKA
Subjt:  MWTASPNPPNPFSRRLPIPTR-----PVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQESQ-----ISGSDVLRALQKA

Query:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV
        AAVKEKNR R+VKE++K+G P TEG  S NS+MNRRVRPLRI +DWGLRLTELEKRLQ+IS+ V
Subjt:  AAVKEKNRAREVKEKQKEG-PSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46735.1 unknown protein3.4e-0935.09Show/hide
Query:  MWTASPNP-PNPFSRRLPIPTRPVSAIYAKSQPPKSDADN--------TTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQESQISGSDVLRALQKAA
        MWT  P   P  F  R   PT   S  Y  SQPP  + D          T S +  S+   G +IL      NP  ++  PK E++ISGSDVL A+Q+A 
Subjt:  MWTASPNP-PNPFSRRLPIPTRPVSAIYAKSQPPKSDADN--------TTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQESQISGSDVLRALQKAA

Query:  AVKEKNRAREVKEKQK-----------EGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISD
        A +++  A + K K +           E     G+D  N      V PLRI SDWG RL E EK L++  +
Subjt:  AVKEKNRAREVKEKQK-----------EGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTTCCGAATACCCAATTTCGTGCTAGCCACAAATTCCAAACCATGTGGACTGCCTCCCCAAACCCACCGAACCCGTTCAGCCGCCGCCTCCCGATCCCAACCAG
GCCGGTCTCCGCCATCTACGCCAAGTCTCAGCCACCCAAAAGCGACGCCGACAACACCACACCAAGCGACAGCAGGAGCAGCATCAAAAGCTTTGGCCACAAAATTCTGT
CAGCCGTGAACTCCCCAAACCCCAATCGGAAACAAACGACCCCAAAACAGGAATCGCAAATTAGTGGGTCCGATGTTCTGAGGGCACTGCAGAAGGCCGCTGCTGTGAAG
GAGAAGAACAGGGCCCGAGAAGTGAAAGAGAAGCAGAAGGAAGGGCCTTCCACCGAAGGGATCGACTCTCAGAACTCTGACATGAACCGTAGAGTGAGGCCATTGAGAAT
CAACAGCGATTGGGGCTTGAGGCTCACCGAGTTGGAAAAACGCCTTCAGGACATTTCTGACATGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTTCCGAATACCCAATTTCGTGCTAGCCACAAATTCCAAACCATGTGGACTGCCTCCCCAAACCCACCGAACCCGTTCAGCCGCCGCCTCCCGATCCCAACCAG
GCCGGTCTCCGCCATCTACGCCAAGTCTCAGCCACCCAAAAGCGACGCCGACAACACCACACCAAGCGACAGCAGGAGCAGCATCAAAAGCTTTGGCCACAAAATTCTGT
CAGCCGTGAACTCCCCAAACCCCAATCGGAAACAAACGACCCCAAAACAGGAATCGCAAATTAGTGGGTCCGATGTTCTGAGGGCACTGCAGAAGGCCGCTGCTGTGAAG
GAGAAGAACAGGGCCCGAGAAGTGAAAGAGAAGCAGAAGGAAGGGCCTTCCACCGAAGGGATCGACTCTCAGAACTCTGACATGAACCGTAGAGTGAGGCCATTGAGAAT
CAACAGCGATTGGGGCTTGAGGCTCACCGAGTTGGAAAAACGCCTTCAGGACATTTCTGACATGGTTTGA
Protein sequenceShow/hide protein sequence
MNLPNTQFRASHKFQTMWTASPNPPNPFSRRLPIPTRPVSAIYAKSQPPKSDADNTTPSDSRSSIKSFGHKILSAVNSPNPNRKQTTPKQESQISGSDVLRALQKAAAVK
EKNRAREVKEKQKEGPSTEGIDSQNSDMNRRVRPLRINSDWGLRLTELEKRLQDISDMV