; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015717 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015717
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:21481713..21483062
RNA-Seq ExpressionLag0015717
SyntenyLag0015717
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.2e-2039.02Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F  +  + + P   +   +++FR VS WVHF  L + C  +  A  LGN+IG FE V+S+ +    G  L+VRV+ D+ +P+ RG  + +       WIP
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQEC
        I YE+LPDF Y CGRL H +++C
Subjt:  ITYEKLPDFCYFCGRLGHTIQEC

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]2.9e-2131.76Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F     +  E   N   ++++  +V FWVH   LP++   +K  + +GN++G+F  +D ++ G   G T+ +RV +D+R+P++RG  + + ++ E +W+ 
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQECKVK---GNGRRAD-LLFDVQLRESQTSKALIRDRKPESREFLGRGIG
          YE+LP +CYFCGRLGH+ +EC  K    +G R D L +   LR        I+ + P     + +G+G
Subjt:  ITYEKLPDFCYFCGRLGHTIQECKVK---GNGRRAD-LLFDVQLRESQTSKALIRDRKPESREFLGRGIG

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]7.6e-2236.96Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F     +  E   N   ++++   V FWVH   LP+V   +K  E +GN++G+F  +D ++ G + G T+++RV +D+R+P++RG  + + + AE +W+ 
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQECKVK---GNGRRADLL
          YE+LP +CYFCGRLGH+ +EC  K    +G R D L
Subjt:  ITYEKLPDFCYFCGRLGHTIQECKVK---GNGRRADLL

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.2e-2034.78Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F     +  E   N   ++++   V FWVH   LP+V   ++  + +GN++G+F  +D ++ G   G T+++RV +D+R+P++RG  + + + A+ +W+ 
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQECKVK---GNGRRADLL
          YE+LP +CYFCGRLGH+ +EC  K    +G R D L
Subjt:  ITYEKLPDFCYFCGRLGHTIQECKVK---GNGRRADLL

XP_042952130.1 uncharacterized protein At4g02000-like [Carya illinoinensis]3.2e-2036.11Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F N   + +E  G++   +++F   SFWV FH +P+ C   K  E +G+S+G+ E VD  E G   G  L+V++ MDI +P+ RG  + V    +K+WIP
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQECKVKGNGRRADLLFDVQLRESQ
         +YEK+P  C+ CG + H  + CKV G     +  +   LR  Q
Subjt:  ITYEKLPDFCYFCGRLGHTIQECKVKGNGRRADLLFDVQLRESQ

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein3.4e-2039.02Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F  S  + E+PKG    T+L+F    FWV  H +PI+C  ++  + L   IG    + + ES +  G+ ++V+VQ+DI +P+KR   IK+G   E   + 
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQEC
        + YE+LPDFC+ CGR+GH+++EC
Subjt:  ITYEKLPDFCYFCGRLGHTIQEC

A0A5C7HA98 CCHC-type domain-containing protein5.8e-2040.32Show/hide
Query:  DFQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWI
        +F +S  + EEP G      L+F  V FWV    LP++C  ++ AE LG  IG    VDS  +G   G+ ++VRV +DI +P++R  ++ V    E+  +
Subjt:  DFQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWI

Query:  PITYEKLPDFCYFCGRLGHTIQEC
        PI YE+LP FC+ CG LGHT+  C
Subjt:  PITYEKLPDFCYFCGRLGHTIQEC

A0A5C7IWT1 CCHC-type domain-containing protein7.6e-2039.02Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F NS    E+P G+   ++L F    FW+  H++PI+C  R+ A  L + +G    + S ES +  G+ ++V+V++DI +P+KR    K GA  E + + 
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQEC
        + YE+LPDFC+ CGR+GH I+EC
Subjt:  ITYEKLPDFCYFCGRLGHTIQEC

A0A6J1BSZ1 uncharacterized protein LOC1110054811.5e-2039.02Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F  +  + + P   +   +++FR VS WVHF  L + C  +  A  LGN+IG FE V+S+ +    G  L+VRV+ D+ +P+ RG  + +       WIP
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQEC
        I YE+LPDF Y CGRL H +++C
Subjt:  ITYEKLPDFCYFCGRLGHTIQEC

A0A6J1D765 uncharacterized protein LOC1110179023.4e-2030.41Show/hide
Query:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP
        F  S  +   P   +   ++ F + +FW+  H +P  C   + A  LG  +G  E ++ D +    G  ++VRV++D+ +P++RG  +K  +  + +W P
Subjt:  FQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDSDESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIP

Query:  ITYEKLPDFCYFCGRLGHTIQECKVKGN--GRRADLLFDVQLRESQTSKALIRDRKPESREF-LGRGIGRGRSDSFGRG----WRDVGREERWK
        + YEKLPDFCY CG++GH+ +EC+ +       +   +   LR +   K++     PE   F  G   GRG   + GRG    WR   R+E W+
Subjt:  ITYEKLPDFCYFCGRLGHTIQECKVKGN--GRRADLLFDVQLRESQTSKALIRDRKPESREF-LGRGIGRGRSDSFGRG----WRDVGREERWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGAAGGAGAGAAGGAAGTGGTGGAGTCAGCCACCACAGACGATCTGAAAGAGGTGTTCGAACAACTTGAAAATCTGAAGATCATAGAAGCCGAGAAAGCAAGGGT
AGTTGAAATAGAAGATGATGACATTGAAGAAGTAGACAAAGACTTCCAAAACTCCACAACTTTGTTTGAAGAACCAAAAGGGAACAGTTGTGCAACGGAGCTCGAGTTCA
GGTACGTGTCTTTCTGGGTTCATTTCCATAAATTACCCATAGTTTGTTTTCGTAGGAAGTATGCCGAAGCCTTGGGTAATTCTATAGGAAGATTTGAAGCAGTTGATTCT
GATGAGTCTGGAAAGATGAGAGGAGAAACGTTAAAAGTAAGAGTTCAGATGGATATCAGGGAACCAATCAAAAGGGGAACTAACATCAAAGTGGGAGCGATGGCTGAGAA
AGTGTGGATTCCAATCACCTACGAAAAACTCCCAGATTTTTGTTACTTCTGTGGTAGGTTGGGCCACACGATTCAAGAATGCAAAGTGAAGGGGAATGGGAGAAGAGCTG
ATCTCCTGTTCGACGTGCAACTCCGGGAATCACAAACCAGTAAGGCCCTGATCAGAGACAGAAAGCCGGAGAGCAGAGAGTTCTTAGGTAGAGGCATAGGGAGAGGAAGG
TCCGATAGTTTTGGGAGGGGATGGAGAGATGTCGGGAGAGAAGAACGATGGAAGAGGGAAGAAAAAAAGTCTGTGGGAGAAGACGACGGAGCTATGGCCGAAAGCTCATT
GGGAAACCGGGAGAGAGATGACCAGAAGGGGAAAGAAGGCAACCGACAAAAAGGGAAGGCAGAGTCAACATCACATGGGGAGATGGGAAAGTCTGACGAGGAAATAGACA
ACAGTGAAAAGGACAGCAAAAAGGACAAAAACAGCCGAAAATGGAAGGAAATTCTCAGGGATAAAGTTCAAATAGTCGCTGAAACAGAGAAAAAAAGGAGAAGTCATGTA
GCATATGTTATTAAAATTCATAATGGGCTGGACATTAATGGGCCTGAAAATGAAATCCCAATCCGAGATGGGCATCAATCAGTGTACAAGGAAAAAATACCTGTAGATGA
TGGGTTGATCAAAGTTAGTGATGATACTGATATGAGGGATAGATCGAGAGCAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGAAGGAGAGAAGGAAGTGGTGGAGTCAGCCACCACAGACGATCTGAAAGAGGTGTTCGAACAACTTGAAAATCTGAAGATCATAGAAGCCGAGAAAGCAAGGGT
AGTTGAAATAGAAGATGATGACATTGAAGAAGTAGACAAAGACTTCCAAAACTCCACAACTTTGTTTGAAGAACCAAAAGGGAACAGTTGTGCAACGGAGCTCGAGTTCA
GGTACGTGTCTTTCTGGGTTCATTTCCATAAATTACCCATAGTTTGTTTTCGTAGGAAGTATGCCGAAGCCTTGGGTAATTCTATAGGAAGATTTGAAGCAGTTGATTCT
GATGAGTCTGGAAAGATGAGAGGAGAAACGTTAAAAGTAAGAGTTCAGATGGATATCAGGGAACCAATCAAAAGGGGAACTAACATCAAAGTGGGAGCGATGGCTGAGAA
AGTGTGGATTCCAATCACCTACGAAAAACTCCCAGATTTTTGTTACTTCTGTGGTAGGTTGGGCCACACGATTCAAGAATGCAAAGTGAAGGGGAATGGGAGAAGAGCTG
ATCTCCTGTTCGACGTGCAACTCCGGGAATCACAAACCAGTAAGGCCCTGATCAGAGACAGAAAGCCGGAGAGCAGAGAGTTCTTAGGTAGAGGCATAGGGAGAGGAAGG
TCCGATAGTTTTGGGAGGGGATGGAGAGATGTCGGGAGAGAAGAACGATGGAAGAGGGAAGAAAAAAAGTCTGTGGGAGAAGACGACGGAGCTATGGCCGAAAGCTCATT
GGGAAACCGGGAGAGAGATGACCAGAAGGGGAAAGAAGGCAACCGACAAAAAGGGAAGGCAGAGTCAACATCACATGGGGAGATGGGAAAGTCTGACGAGGAAATAGACA
ACAGTGAAAAGGACAGCAAAAAGGACAAAAACAGCCGAAAATGGAAGGAAATTCTCAGGGATAAAGTTCAAATAGTCGCTGAAACAGAGAAAAAAAGGAGAAGTCATGTA
GCATATGTTATTAAAATTCATAATGGGCTGGACATTAATGGGCCTGAAAATGAAATCCCAATCCGAGATGGGCATCAATCAGTGTACAAGGAAAAAATACCTGTAGATGA
TGGGTTGATCAAAGTTAGTGATGATACTGATATGAGGGATAGATCGAGAGCAGAATAA
Protein sequenceShow/hide protein sequence
MLEGEKEVVESATTDDLKEVFEQLENLKIIEAEKARVVEIEDDDIEEVDKDFQNSTTLFEEPKGNSCATELEFRYVSFWVHFHKLPIVCFRRKYAEALGNSIGRFEAVDS
DESGKMRGETLKVRVQMDIREPIKRGTNIKVGAMAEKVWIPITYEKLPDFCYFCGRLGHTIQECKVKGNGRRADLLFDVQLRESQTSKALIRDRKPESREFLGRGIGRGR
SDSFGRGWRDVGREERWKREEKKSVGEDDGAMAESSLGNRERDDQKGKEGNRQKGKAESTSHGEMGKSDEEIDNSEKDSKKDKNSRKWKEILRDKVQIVAETEKKRRSHV
AYVIKIHNGLDINGPENEIPIRDGHQSVYKEKIPVDDGLIKVSDDTDMRDRSRAE