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Lag0015718 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015718
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:21483111..21483740
RNA-Seq ExpressionLag0015718
SyntenyLag0015718
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]1.3e-2254.55Show/hide
Query:  RGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPE-GWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        R ++ ++ F V   GKSGGL LLW ++ ++ + SFS GHIDA +K P    WRFTGFYGNPK   R +SW+LL R + L+DLPW+ GGDFNEIL   EK
Subjt:  RGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPE-GWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]3.4e-2357.14Show/hide
Query:  RGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        R L+     SV S GKSGGL LLW  + ++ I S S GHID+ I D  G WRFTGFYGNP    R  SWKLLER  R+ DLPW++GGDFNEI+   EK
Subjt:  RGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

XP_030497841.1 uncharacterized protein LOC115713498 [Cannabis sativa]2.6e-2357.73Show/hide
Query:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        L     F V ++GKSGGL LLW   V+  I SFS  HID+ I+  EG WWRFTGFYG+P    R ESWKLL R  R+Y  PW++GGDFNEIL  KEK
Subjt:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

XP_030929385.1 uncharacterized protein LOC115955407 [Quercus lobata]1.3e-2252.58Show/hide
Query:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGW-WRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        +   +G  +PS G+SGGL LLW +E+++ + SFSD HIDA + +  G+ WR TGFYGNPKV  RKESW+LL+   R + LPWL  G+FNEI+   EK
Subjt:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGW-WRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

XP_030970961.1 uncharacterized protein LOC115991405 [Quercus lobata]1.3e-2252.58Show/hide
Query:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGW-WRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        +   +G  +PS G+SGGL LLW +E+++ + SFSD HIDA + +  G+ WR TGFYGNP+V  RKESW+LL+   R + LPWL  GDFNEI+   EK
Subjt:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGW-WRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

TrEMBL top hitse value%identityAlignment
A0A2N9I611 Uncharacterized protein1.5e-2458.76Show/hide
Query:  GLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        GL   S F VPSKG+SGGL LLW E+VDL I S++  HIDA IK  EG WRFTGFYG+P+   RK SW LL+  + +  LPW+  GDFNEIL   EK
Subjt:  GLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

A0A6J1DUG8 uncharacterized protein LOC1110241351.6e-2357.14Show/hide
Query:  RGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        R L+     SV S GKSGGL LLW  + ++ I S S GHID+ I D  G WRFTGFYGNP    R  SWKLLER  R+ DLPW++GGDFNEI+   EK
Subjt:  RGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGWWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

A0A803PBM9 Uncharacterized protein4.7e-2353.45Show/hide
Query:  EGQRKKFKCNEISYSTLRGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLP
        E + KK K   +  S    L     F V + GKSGGL LLW   VD  I SFS  HID+ I+  EG WWRFTGFYG+P    R ESWKLL R  R+Y  P
Subjt:  EGQRKKFKCNEISYSTLRGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLP

Query:  WLVGGDFNEILFEKEK
        W++GGDFNEIL  KEK
Subjt:  WLVGGDFNEILFEKEK

A0A803PC75 Uncharacterized protein1.2e-2357.73Show/hide
Query:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK
        L     F V ++GKSGGL LLW   V+  I SFS  HID+ I+  EG WWRFTGFYG+P    R ESWKLL R  R+Y  PW++GGDFNEIL  KEK
Subjt:  LNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK

A0A803QLY3 Uncharacterized protein6.2e-2353.64Show/hide
Query:  KCNEISYSTLR-GLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGD
        K N +S   L   L     F V +KGKSG L LLW E+V+  + SFS  HID+ I+  EG WWRFT FYG+P    R +SWKLL R  R+Y  PW VGGD
Subjt:  KCNEISYSTLR-GLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEG-WWRFTGFYGNPKVGLRKESWKLLERFERLYDLPWLVGGD

Query:  FNEILFEKEK
        FNEIL +KEK
Subjt:  FNEILFEKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAGCTGAGCCTATCAACCGTGCAAGAGAGAATTCAGAGGCAGTCGAAAGAAAGGAAAAAGGGAAAGGGACAGTAGGGGAAGAAGAGGGCCAGAGAAAGAAGTT
CAAGTGCAACGAAATCAGCTACTCCACATTGAGAGGTTTAAATCTGGCTAGTGGGTTCAGTGTGCCTAGCAAGGGCAAAAGTGGAGGGTTGTGCCTGTTGTGGGGGGAGG
AAGTGGATTTAATTATTAATTCCTTCTCTGATGGGCATATAGATGCTACGATAAAAGATCCCGAGGGTTGGTGGAGATTCACGGGGTTCTACGGGAATCCCAAAGTGGGC
TTGAGAAAAGAGTCGTGGAAGCTTCTCGAAAGATTTGAAAGATTATATGATCTCCCTTGGCTAGTAGGAGGGGACTTCAACGAAATTCTCTTTGAAAAAGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAGCTGAGCCTATCAACCGTGCAAGAGAGAATTCAGAGGCAGTCGAAAGAAAGGAAAAAGGGAAAGGGACAGTAGGGGAAGAAGAGGGCCAGAGAAAGAAGTT
CAAGTGCAACGAAATCAGCTACTCCACATTGAGAGGTTTAAATCTGGCTAGTGGGTTCAGTGTGCCTAGCAAGGGCAAAAGTGGAGGGTTGTGCCTGTTGTGGGGGGAGG
AAGTGGATTTAATTATTAATTCCTTCTCTGATGGGCATATAGATGCTACGATAAAAGATCCCGAGGGTTGGTGGAGATTCACGGGGTTCTACGGGAATCCCAAAGTGGGC
TTGAGAAAAGAGTCGTGGAAGCTTCTCGAAAGATTTGAAAGATTATATGATCTCCCTTGGCTAGTAGGAGGGGACTTCAACGAAATTCTCTTTGAAAAAGAAAAGTGA
Protein sequenceShow/hide protein sequence
MAKAEPINRARENSEAVERKEKGKGTVGEEEGQRKKFKCNEISYSTLRGLNLASGFSVPSKGKSGGLCLLWGEEVDLIINSFSDGHIDATIKDPEGWWRFTGFYGNPKVG
LRKESWKLLERFERLYDLPWLVGGDFNEILFEKEK