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Lag0015724 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015724
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L11
Genome locationchr12:21618583..21620739
RNA-Seq ExpressionLag0015724
SyntenyLag0015724
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4133719.1 hypothetical protein ERO13_D08G113316v2 [Gossypium hirsutum]3.2e-0980.95Show/hide
Query:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        CH+   LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

KAG6490681.1 hypothetical protein ZIOFF_051991 [Zingiber officinale]3.2e-0952.38Show/hide
Query:  TTSALLQGSRRGHCPPTLEAFSQTFIS-IQALSK--CHST-------PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        T S    G R       LE  S +F+  I+   K  C+ T        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  TTSALLQGSRRGHCPPTLEAFSQTFIS-IQALSK--CHST-------PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

KJB23930.1 hypothetical protein B456_004G122000 [Gossypium raimondii]3.2e-0980.95Show/hide
Query:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        CH+   LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

QCD87444.1 cathepsin L [Vigna unguiculata]3.2e-0947.25Show/hide
Query:  WRPWDWAATTSALLQGSRRGHCPPTLEAFSQTFISIQALSK--CHST-------PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        WR W  +   S+   G+     P  L+ ++     I+   K  C+ T        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  WRPWDWAATTSALLQGSRRGHCPPTLEAFSQTFISIQALSK--CHST-------PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

TYI68945.1 hypothetical protein E1A91_D08G120700v1, partial [Gossypium mustelinum]3.2e-0980.95Show/hide
Query:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        CH+   LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

TrEMBL top hitse value%identityAlignment
A0A0D2RXW4 Uncharacterized protein1.6e-0980.95Show/hide
Query:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        CH+   LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

A0A1J7HUT5 Uncharacterized protein2.0e-0984.62Show/hide
Query:  STPLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        +T LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  STPLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

A0A4D6LH23 Cathepsin L1.6e-0947.25Show/hide
Query:  WRPWDWAATTSALLQGSRRGHCPPTLEAFSQTFISIQALSK--CHST-------PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        WR W  +   S+   G+     P  L+ ++     I+   K  C+ T        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  WRPWDWAATTSALLQGSRRGHCPPTLEAFSQTFISIQALSK--CHST-------PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

A0A5D2TWA3 Uncharacterized protein (Fragment)1.6e-0980.95Show/hide
Query:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        CH+   LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  CHST-PLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

M0U4D6 Ribosomal_L5_C domain-containing protein2.0e-0984.62Show/hide
Query:  STPLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        +T LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  STPLLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L116.1e-1186.11Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFS+TGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

P42794 60S ribosomal protein L11-22.1e-1188.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

P42795 60S ribosomal protein L11-12.1e-1188.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

P46287 60S ribosomal protein L112.1e-1188.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

Q0DK10 60S ribosomal protein L116.1e-1186.11Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFS+TGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A1.5e-1288.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT3G58700.1 Ribosomal L5P family protein1.5e-1288.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT4G18730.1 ribosomal protein L16B1.5e-1288.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT5G45775.1 Ribosomal L5P family protein1.5e-1288.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI

AT5G45775.2 Ribosomal L5P family protein1.5e-1288.89Show/hide
Query:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI
        LLESGLK+KEY+LL RNFSDTGCFGF IQEHIDLGI
Subjt:  LLESGLKLKEYKLLDRNFSDTGCFGFDIQEHIDLGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCATTACCTCCAAGATCATGTAACCGAGATTGTCATGCTTCCTTCCTATCACCCCAGTCGCCGATAGTCGCCCAGTCCTCTGATTCTTCCGACCATCACCGGCG
AGCGAAGCAGCCACGCGATTTCTCGAGGCTGTGGAGACCGTGGGATTGGGCTGCCACAACTTCGGCACTACTGCAGGGAAGTCGACGCGGCCACTGCCCACCAACGCTTG
AAGCTTTCTCTCAGACTTTCATCTCAATTCAGGCTCTGTCAAAATGTCATTCCACTCCTCTTTTGGAAAGTGGGTTGAAGCTTAAGGAGTACAAGTTGCTTGACAGGAAC
TTCAGTGACACTGGATGCTTTGGCTTTGATATTCAGGAGCACATTGATCTTGGAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCATTACCTCCAAGATCATGTAACCGAGATTGTCATGCTTCCTTCCTATCACCCCAGTCGCCGATAGTCGCCCAGTCCTCTGATTCTTCCGACCATCACCGGCG
AGCGAAGCAGCCACGCGATTTCTCGAGGCTGTGGAGACCGTGGGATTGGGCTGCCACAACTTCGGCACTACTGCAGGGAAGTCGACGCGGCCACTGCCCACCAACGCTTG
AAGCTTTCTCTCAGACTTTCATCTCAATTCAGGCTCTGTCAAAATGTCATTCCACTCCTCTTTTGGAAAGTGGGTTGAAGCTTAAGGAGTACAAGTTGCTTGACAGGAAC
TTCAGTGACACTGGATGCTTTGGCTTTGATATTCAGGAGCACATTGATCTTGGAATCTAA
Protein sequenceShow/hide protein sequence
MKSLPPRSCNRDCHASFLSPQSPIVAQSSDSSDHHRRAKQPRDFSRLWRPWDWAATTSALLQGSRRGHCPPTLEAFSQTFISIQALSKCHSTPLLESGLKLKEYKLLDRN
FSDTGCFGFDIQEHIDLGI