| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN70326.1 hypothetical protein VITISV_041472 [Vitis vinifera] | 1.4e-34 | 43.18 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
MH EFEMSMMGEL FFLGLQIKQLK+ FI+Q KY DLLKRF E K KTPMS+S KLD DE+GLWYP+ + F+L+GYSDADFA ++R
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
Query: --------------------------------------LPYRSNI---------VNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
L + I V I CDN S I ++KNP H RTKHI+I HF+ D +KG+I +
Subjt: --------------------------------------LPYRSNI---------VNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
Query: IHTSDNATDMLNKPLTQLKF
+ T D D+ KPL++ +F
Subjt: IHTSDNATDMLNKPLTQLKF
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| GEU86091.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium] | 1.4e-34 | 46.67 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE-----------------------------GLWYP
M N F+MS MG+LSFFLGL++KQ KD IFISQ+KY ++LK F F K TP+ T L KDEE GLWYP
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE-----------------------------GLWYP
Query: RNNAEFKLVGYSDADFAGSLLDRL----PYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNK
+ ++ F L YSD+D+AG+ L+R Y N +N IY DN+STI + KNP FH +TKHI+I HF+RD EK IQVLKIH DN D+L K
Subjt: RNNAEFKLVGYSDADFAGSLLDRL----PYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNK
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| GEU93550.1 hypothetical protein [Tanacetum cinerariifolium] | 2.6e-33 | 41.85 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE------------------GLWYPRNNAEFKLVGY
M N F+MS MGEL+FFLGLQ+KQ +D IFISQ+KY ++LK+F F K A TP+ T L KDEE G+WYP+ ++ F L Y
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE------------------GLWYPRNNAEFKLVGY
Query: SDADFAGSLLDR--------------------------LPYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNA
D+D+A + LDR L Y N++N IY DN STI + KN FH +TKHI+I HF+RD EK IQVLKIHT DN
Subjt: SDADFAGSLLDR--------------------------LPYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNA
Query: TDMLNKPLTQLKFQHCLQFVGFHLPEK
D+L K + + L VGF+ ++
Subjt: TDMLNKPLTQLKFQHCLQFVGFHLPEK
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| PWA63219.1 retrotransposon protein [Artemisia annua] | 3.1e-34 | 39.19 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
MH+EFEMSMMGEL+FFLGLQIKQL+D IF +Q KY +++LK+F + K K PMST KL +DEEGLWYP+ + + + Y+D+D AG +DR
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
Query: -----------------------------------------------LPYRSNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
R + I CDN+ I L+KNP H RTKHI+I HF+RD ++KG I + K
Subjt: -----------------------------------------------LPYRSNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
Query: IHTSDNATDMLNKPLTQLKFQH
+ DN D+ KPL + F H
Subjt: IHTSDNATDMLNKPLTQLKFQH
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| RVW40379.1 Copia protein [Vitis vinifera] | 2.6e-33 | 45.36 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
MH+EFEMSMMGEL+FFLGLQIKQLK+ FI+Q KY RDLLKRF E K KTPMS+S KLD DE+GLWYP+ + F+L+GYSDADF G ++R
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
Query: ------LPYRSNIVN---------------------------------------IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEI
+ + S N CDN S I ++KNP H RTKHI+I HF+RD +KG+I
Subjt: ------LPYRSNIVN---------------------------------------IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2U1MPN7 Retrotransposon protein | 1.5e-34 | 39.19 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
MH+EFEMSMMGEL+FFLGLQIKQL+D IF +Q KY +++LK+F + K K PMST KL +DEEGLWYP+ + + + Y+D+D AG +DR
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
Query: -----------------------------------------------LPYRSNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
R + I CDN+ I L+KNP H RTKHI+I HF+RD ++KG I + K
Subjt: -----------------------------------------------LPYRSNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
Query: IHTSDNATDMLNKPLTQLKFQH
+ DN D+ KPL + F H
Subjt: IHTSDNATDMLNKPLTQLKFQH
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| A0A438DY28 Copia protein | 1.3e-33 | 45.36 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
MH+EFEMSMMGEL+FFLGLQIKQLK+ FI+Q KY RDLLKRF E K KTPMS+S KLD DE+GLWYP+ + F+L+GYSDADF G ++R
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
Query: ------LPYRSNIVN---------------------------------------IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEI
+ + S N CDN S I ++KNP H RTKHI+I HF+RD +KG+I
Subjt: ------LPYRSNIVN---------------------------------------IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEI
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| A0A6L2NIK7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.7e-35 | 46.67 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE-----------------------------GLWYP
M N F+MS MG+LSFFLGL++KQ KD IFISQ+KY ++LK F F K TP+ T L KDEE GLWYP
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE-----------------------------GLWYP
Query: RNNAEFKLVGYSDADFAGSLLDRL----PYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNK
+ ++ F L YSD+D+AG+ L+R Y N +N IY DN+STI + KNP FH +TKHI+I HF+RD EK IQVLKIH DN D+L K
Subjt: RNNAEFKLVGYSDADFAGSLLDRL----PYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNK
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| A0A6L2P531 Integrase catalytic domain-containing protein (Fragment) | 1.3e-33 | 41.85 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE------------------GLWYPRNNAEFKLVGY
M N F+MS MGEL+FFLGLQ+KQ +D IFISQ+KY ++LK+F F K A TP+ T L KDEE G+WYP+ ++ F L Y
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEE------------------GLWYPRNNAEFKLVGY
Query: SDADFAGSLLDR--------------------------LPYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNA
D+D+A + LDR L Y N++N IY DN STI + KN FH +TKHI+I HF+RD EK IQVLKIHT DN
Subjt: SDADFAGSLLDR--------------------------LPYRSNIVN--IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNA
Query: TDMLNKPLTQLKFQHCLQFVGFHLPEK
D+L K + + L VGF+ ++
Subjt: TDMLNKPLTQLKFQHCLQFVGFHLPEK
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| A5BMB5 Reverse transcriptase Ty1/copia-type domain-containing protein | 6.7e-35 | 43.18 | Show/hide |
Query: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
MH EFEMSMMGEL FFLGLQIKQLK+ FI+Q KY DLLKRF E K KTPMS+S KLD DE+GLWYP+ + F+L+GYSDADFA ++R
Subjt: MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDR------
Query: --------------------------------------LPYRSNI---------VNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
L + I V I CDN S I ++KNP H RTKHI+I HF+ D +KG+I +
Subjt: --------------------------------------LPYRSNI---------VNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLK
Query: IHTSDNATDMLNKPLTQLKF
+ T D D+ KPL++ +F
Subjt: IHTSDNATDMLNKPLTQLKF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.8e-08 | 39.71 | Show/hide |
Query: NIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNKPLTQLKF
N + IY DNQ I + NP H R KHIDI +HF R++++ I + I T + D+ KPL +F
Subjt: NIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNKPLTQLKF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-15 | 45.95 | Show/hide |
Query: IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNKPLTQLKFQHCLQFVGFH
+YCD+QS I L+KN +H RTKHID+ +H++R+ ++ ++VLKI T++N DML K + + KF+ C + VG H
Subjt: IYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNKPLTQLKFQHCLQFVGFH
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-13 | 36 | Show/hide |
Query: PMSTSTKLDKDEEGLWYPRNNAEFKLVG--YSDADFAGSLLDRLPYR-SNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHT
P+S S+K K G+ AE++ V S+ + SLL L R + IYCDN +L NP FH R KHI I++HF+R++++ G ++V+ + T
Subjt: PMSTSTKLDKDEEGLWYPRNNAEFKLVG--YSDADFAGSLLDRLPYR-SNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHT
Query: SDNATDMLNKPLTQLKFQHCLQFVG
D D L KPL++ FQ+ +G
Subjt: SDNATDMLNKPLTQLKFQHCLQFVG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-13 | 35.2 | Show/hide |
Query: PMSTSTKLDKDEEGLWYPRNNAEFKLVG--YSDADFAGSLLDRLPYR-SNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHT
P+S S+K K G+ AE++ V S+ + SLL L + S+ IYCDN +L NP FH R KHI +++HF+R++++ G ++V+ + T
Subjt: PMSTSTKLDKDEEGLWYPRNNAEFKLVG--YSDADFAGSLLDRLPYR-SNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHT
Query: SDNATDMLNKPLTQLKFQHCLQFVG
D D L KPL+++ FQ+ + +G
Subjt: SDNATDMLNKPLTQLKFQHCLQFVG
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