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Lag0015733 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015733
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCSC1-like protein RXW8 isoform X1
Genome locationchr12:21970165..21971196
RNA-Seq ExpressionLag0015733
SyntenyLag0015733
Gene Ontology termsGO:0006811 - ion transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951306.1 CSC1-like protein RXW8 isoform X2 [Cucurbita moschata]9.2e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

XP_023002591.1 CSC1-like protein RXW8 isoform X1 [Cucurbita maxima]9.2e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

XP_023002593.1 CSC1-like protein RXW8 isoform X2 [Cucurbita maxima]9.2e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

XP_023522488.1 CSC1-like protein RXW8 isoform X1 [Cucurbita pepo subsp. pepo]9.2e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

XP_023522489.1 CSC1-like protein RXW8 isoform X2 [Cucurbita pepo subsp. pepo]9.2e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

TrEMBL top hitse value%identityAlignment
A0A0A0LNP4 Uncharacterized protein1.2e-1752.04Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQK +GGCF AG TNSF +LPSVN++VK+K+L+GNMDL+A EK                        ANPMSWAT  + +P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

A0A6J1GH75 CSC1-like protein RXW8 isoform X24.5e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

A0A6J1GIA6 CSC1-like protein RXW8 isoform X14.5e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

A0A6J1KJY1 CSC1-like protein RXW8 isoform X14.5e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

A0A6J1KU12 CSC1-like protein RXW8 isoform X24.5e-2056.12Show/hide
Query:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP
        D  K+YN M+ENSVEMHCQKFKGGCF AGPTNSFA+LPSVN++V DK L+G+MD++AGEK                        ANPMSWATD +  P
Subjt:  DTLKIYN-MRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEK-----------------------LANPMSWATDCSLQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTTGTTCACTTTTAGAAGTTGATAACAGAGTGAATTTTCATAAGGATACCCTAAAAATTTACAACATGAGGGAAAATTCAGTTGAAATGCACTGTCAGAAGTT
CAAAGGAGGTTGTTTTACTGCAGGACCAACAAATTCTTTTGCAATGCTCCCTAGTGTAAATAATAATGTGAAGGATAAAGAACTATTTGGTAATATGGACTTGATGGCCG
GAGAAAAGTTAGCAAATCCTATGTCATGGGCCACAGACTGCAGTCTTCAACCAACTTGCTTTGTGATGATTGTTAATAAATGGAAAATTTTTTATTGCTTGGAGTTTTGC
TTCCAGATGTTGCAGGTCACAGATATTACTGGGAATGTTGAACTGTTAAGCTCAGAAACTGAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTTGTTCACTTTTAGAAGTTGATAACAGAGTGAATTTTCATAAGGATACCCTAAAAATTTACAACATGAGGGAAAATTCAGTTGAAATGCACTGTCAGAAGTT
CAAAGGAGGTTGTTTTACTGCAGGACCAACAAATTCTTTTGCAATGCTCCCTAGTGTAAATAATAATGTGAAGGATAAAGAACTATTTGGTAATATGGACTTGATGGCCG
GAGAAAAGTTAGCAAATCCTATGTCATGGGCCACAGACTGCAGTCTTCAACCAACTTGCTTTGTGATGATTGTTAATAAATGGAAAATTTTTTATTGCTTGGAGTTTTGC
TTCCAGATGTTGCAGGTCACAGATATTACTGGGAATGTTGAACTGTTAAGCTCAGAAACTGAGAGTTGA
Protein sequenceShow/hide protein sequence
MLVCSLLEVDNRVNFHKDTLKIYNMRENSVEMHCQKFKGGCFTAGPTNSFAMLPSVNNNVKDKELFGNMDLMAGEKLANPMSWATDCSLQPTCFVMIVNKWKIFYCLEFC
FQMLQVTDITGNVELLSSETES