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Lag0015801 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015801
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr12:24726196..24726666
RNA-Seq ExpressionLag0015801
SyntenyLag0015801
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PKA49974.1 Putative ribonuclease H protein [Apostasia shenzhenica]7.8e-2641.45Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI-RVREDLRGKRVKEI
        +LAK  WRI+    SLMA VL+ KYF    FL A+A  N S +W+SI+WGR L   G +W++G GN V +  DPW+     +  I     +L   R+ E+
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI-RVREDLRGKRVKEI

Query:  LNEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
        L E+G W  + I     S D   IL MP  +T  +D +IW  D KG +SVKS
Subjt:  LNEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]3.0e-2534.44Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL
        ++AK  WR+++ P SLMA V++ +Y++  +F  AK   N S +W+SI+WG  +  +G +W++G G +V + +D W+     + PI  +       V +++
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL

Query:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
        + E  W+VD ++  F+  D+EAIL +   +   EDE++W  D KG +SVKS
Subjt:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.0e-2638.82Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL
        +LAK  WRIL  P S+++ VL+G+YF+  SF++AK  GN S +W+SI+WGR L  +G +W++G G+ V I  D W+ N      +         RV  ++
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL

Query:  -NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
         +EEG W+ D+++D F   + + ILS+P    A ED +IW  +  G++SV+S
Subjt:  -NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.3e-3345.03Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL
        MLAK SWRIL+ P SL+A  LRGKYF+ GSFLQAK     S  W+SI+WGR LF +GY+WKVG G  + +  DPW+  DG + P+     +R   V  ++
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL

Query:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
           G W    ++++F+  + + IL  P  +   +DEIIWG+D  G+FSV+S
Subjt:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

XP_042962692.1 uncharacterized protein LOC122296963 [Carya illinoinensis]6.6e-2539.35Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWV---PIRVREDLRGKRVK
        +LAK  WRILK P SL A + R KYFR GSF++AK     SL+W+SI   R++  EG +W+VG G ++ I    W+ +   +    P++V ++    +V+
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWV---PIRVREDLRGKRVK

Query:  EILN-EEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
        E+++ ++G W    I++ F++ + E ILSMP  +   +D ++WG   KGLFSVKS
Subjt:  EILN-EEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

TrEMBL top hitse value%identityAlignment
A0A2I0A354 Ribonuclease H protein3.8e-2641.45Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI-RVREDLRGKRVKEI
        +LAK  WRI+    SLMA VL+ KYF    FL A+A  N S +W+SI+WGR L   G +W++G GN V +  DPW+     +  I     +L   R+ E+
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI-RVREDLRGKRVKEI

Query:  LNEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
        L E+G W  + I     S D   IL MP  +T  +D +IW  D KG +SVKS
Subjt:  LNEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

A0A6J1DAR4 uncharacterized protein LOC1110189549.9e-2738.82Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL
        +LAK  WRIL  P S+++ VL+G+YF+  SF++AK  GN S +W+SI+WGR L  +G +W++G G+ V I  D W+ N      +         RV  ++
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL

Query:  -NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
         +EEG W+ D+++D F   + + ILS+P    A ED +IW  +  G++SV+S
Subjt:  -NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

A0A6J1DRA0 uncharacterized protein LOC1110224231.1e-3345.03Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL
        MLAK SWRIL+ P SL+A  LRGKYF+ GSFLQAK     S  W+SI+WGR LF +GY+WKVG G  + +  DPW+  DG + P+     +R   V  ++
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL

Query:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
           G W    ++++F+  + + IL  P  +   +DEIIWG+D  G+FSV+S
Subjt:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

A0A6J1E2L3 uncharacterized protein LOC1110254463.2e-2537.5Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL
        +LAK SWRIL +P S++A VL+G+YFR    LQA+ +G+ S +W+S+VWG  L  +G +W++G G  V +  D W+ N      +  R       V  ++
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL

Query:  NEE-GFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
        N +   WKVD I+ AF   + + ILS+P  +    D++IW  +  G+++VKS
Subjt:  NEE-GFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

A0A803P9P5 Uncharacterized protein2.4e-2535.1Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL
        +LAK SW I  +P SL+  +L+ +YF+  +FL+A+     SL W+SI+WG+ L  +G +WKVG GNQ+    DPW+     + P+  +      +V E++
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEIL

Query:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
          +  W   +++  FL  DV  I S+P       D++IW  +  G++SVKS
Subjt:  NEEGFWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.3e-0731.76Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI
        +LAK S+RI+  P +L++ +LR +YF   S ++       S  W+SI+ GR L   G    +G G    +  D W+M++    P+
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.5e-0623.13Show/hide
Query:  LRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEILNEEG---FWKVDIIKDAFLS
        ++ +YF+  S L AK +   S  W S++ G +L  +G +  +G G  + I  D  +++     P+   E  +   +  +   +G   FW    I      
Subjt:  LRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEILNEEG---FWKVDIIKDAFLS

Query:  WDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
         D   I  +    +   D+IIW  +  G ++V+S
Subjt:  WDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

AT4G29090.1 Ribonuclease H-like superfamily protein2.6e-1126.25Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGK------
        +L K  WR+L  P SLMA V + +YF     L A      S VWKSI   + +  +G +  VG G  + I    W+ +      +R++     +      
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGK------

Query:  --RVKEILNEEG-FWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS
          +V ++++E G  W+ D+I+  F   + + I  +        D   W     G ++VKS
Subjt:  --RVKEILNEEG-FWKVDIIKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.2e-0931.76Show/hide
Query:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI
        +LAK S+RI+  P +L++ +LR +YF   S ++       S  W+SI+ GR L   G    +G G    +  D W+M++    P+
Subjt:  MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCGAAGCTCAGTTGGAGAATCCTTAAAGATCCTGGGAGTCTCATGGCCTGGGTTCTAAGAGGAAAATACTTCAGAGGAGGTAGCTTTCTTCAGGCAAAAGCTAA
AGGAAATGATTCCTTGGTTTGGAAGAGCATCGTGTGGGGAAGGTCTTTGTTTATGGAGGGTTATAAGTGGAAAGTGGGCAAAGGCAACCAAGTGTGTATTGATGAGGATC
CGTGGATGATGAATGACGGTGGTTGGGTCCCTATCAGAGTGAGGGAGGATCTTAGAGGTAAAAGAGTGAAGGAGATCCTTAATGAGGAGGGGTTTTGGAAAGTAGACATT
ATTAAGGATGCTTTCCTTTCTTGGGACGTAGAGGCGATATTGAGTATGCCTAGGAGAAATACAGCTAATGAGGATGAGATTATTTGGGGAGTTGATTTGAAAGGCTTATT
CTCAGTGAAAAGTGTTGGGATTGTGTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCGAAGCTCAGTTGGAGAATCCTTAAAGATCCTGGGAGTCTCATGGCCTGGGTTCTAAGAGGAAAATACTTCAGAGGAGGTAGCTTTCTTCAGGCAAAAGCTAA
AGGAAATGATTCCTTGGTTTGGAAGAGCATCGTGTGGGGAAGGTCTTTGTTTATGGAGGGTTATAAGTGGAAAGTGGGCAAAGGCAACCAAGTGTGTATTGATGAGGATC
CGTGGATGATGAATGACGGTGGTTGGGTCCCTATCAGAGTGAGGGAGGATCTTAGAGGTAAAAGAGTGAAGGAGATCCTTAATGAGGAGGGGTTTTGGAAAGTAGACATT
ATTAAGGATGCTTTCCTTTCTTGGGACGTAGAGGCGATATTGAGTATGCCTAGGAGAAATACAGCTAATGAGGATGAGATTATTTGGGGAGTTGATTTGAAAGGCTTATT
CTCAGTGAAAAGTGTTGGGATTGTGTCCTGA
Protein sequenceShow/hide protein sequence
MLAKLSWRILKDPGSLMAWVLRGKYFRGGSFLQAKAKGNDSLVWKSIVWGRSLFMEGYKWKVGKGNQVCIDEDPWMMNDGGWVPIRVREDLRGKRVKEILNEEGFWKVDI
IKDAFLSWDVEAILSMPRRNTANEDEIIWGVDLKGLFSVKSVGIVS