; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015805 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015805
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:24921404..24924790
RNA-Seq ExpressionLag0015805
SyntenyLag0015805
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050625.1 Enzymatic polyprotein [Cucumis melo var. makuwa]5.3e-1740.59Show/hide
Query:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSD---SEESIIYSSDEGQILE-LQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDN
        GHYAN+CP+ KKIN++EID D KQ LL +++++   SEE    S  E  +L  L EE+    SS  N+ + +    CSGCI VLT  Q+ LLD+++++D+
Subjt:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSD---SEESIIYSSDEGQILE-LQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDN

Query:  VELQKSILHSLKNSILENRDQ--EEQSNFQPYEWKNVFKKFEEPKPVTIQDLQAEINILK-EKSQNSKEI
          ++K+IL  L+   LE  DQ  ++  NF      N+  K E   PV + DLQ EI +LK E ++N ++I
Subjt:  VELQKSILHSLKNSILENRDQ--EEQSNFQPYEWKNVFKKFEEPKPVTIQDLQAEINILK-EKSQNSKEI

TYK28079.1 hypothetical protein E5676_scaffold384G003430 [Cucumis melo var. makuwa]2.6e-1640.11Show/hide
Query:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE
        GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S     YS SD +D+E          GK  CSG I V+TKDQE
Subjt:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE

Query:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI
        TL D++++I + E +++ L  LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+ ILK +   +K+ LI
Subjt:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI

XP_022933039.1 uncharacterized protein LOC111439730 [Cucurbita moschata]3.8e-2351.16Show/hide
Query:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV
        R  GHYANKCP++ KINEL+ID + K QLL +  +DSE+     S EG+ILELQEE+DSYSS++Y  E+ +GKR C GCI VLTKDQE LL+VV+K+ + 
Subjt:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV

Query:  ELQKSILHSLKNSILENRDQEEQSNFQPY
        E+Q+ I   L++++  ++  E +    PY
Subjt:  ELQKSILHSLKNSILENRDQEEQSNFQPY

XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]1.3e-1856.31Show/hide
Query:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV
        R  GHYA KCP+K KINEL+ID + K QLL +  ++SE+     S EG+IL+LQEE+DS SS+ Y  E+ +GKR C GCI VLTKDQE LL+VV+K+ + 
Subjt:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV

Query:  ELQ
        E+Q
Subjt:  ELQ

XP_023521035.1 uncharacterized protein LOC111784623 [Cucurbita pepo subsp. pepo]3.3e-1954.87Show/hide
Query:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV
        R  GHYAN+CP++ KINEL+ID + K QLL +  +DSE+     S EG+ILELQEE+DSYSS++Y   + +GKR C GCI VLTKDQE LL+VV+K    
Subjt:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV

Query:  ELQKSILHSLKNS
        ++QK    SL +S
Subjt:  ELQKSILHSLKNS

TrEMBL top hitse value%identityAlignment
A0A5A7UAJ7 Enzymatic polyprotein2.6e-1740.59Show/hide
Query:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSD---SEESIIYSSDEGQILE-LQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDN
        GHYAN+CP+ KKIN++EID D KQ LL +++++   SEE    S  E  +L  L EE+    SS  N+ + +    CSGCI VLT  Q+ LLD+++++D+
Subjt:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSD---SEESIIYSSDEGQILE-LQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDN

Query:  VELQKSILHSLKNSILENRDQ--EEQSNFQPYEWKNVFKKFEEPKPVTIQDLQAEINILK-EKSQNSKEI
          ++K+IL  L+   LE  DQ  ++  NF      N+  K E   PV + DLQ EI +LK E ++N ++I
Subjt:  VELQKSILHSLKNSILENRDQ--EEQSNFQPYEWKNVFKKFEEPKPVTIQDLQAEINILK-EKSQNSKEI

A0A5A7UX67 Enzymatic polyprotein1.7e-1639.56Show/hide
Query:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE
        GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S     YS SD +D+E          GK  CSG I V+TKDQE
Subjt:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE

Query:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI
        TL D++++I + E +++ L  LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+  LK +   +K+ LI
Subjt:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI

A0A5D3BEY3 Enzymatic polyprotein1.7e-1639.56Show/hide
Query:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE
        GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S     YS SD +D+E          GK  CSG I V+TKDQE
Subjt:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE

Query:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI
        TL D++++I + E +++ L  LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+  LK +   +K+ LI
Subjt:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI

A0A5D3DXC4 CCHC-type domain-containing protein1.3e-1640.11Show/hide
Query:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE
        GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S     YS SD +D+E          GK  CSG I V+TKDQE
Subjt:  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-----YSSSDYNDEE--------YDGKRVCSGCICVLTKDQE

Query:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI
        TL D++++I + E +++ L  LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+ ILK +   +K+ LI
Subjt:  TLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEILI

A0A6J1EYM2 uncharacterized protein LOC1114397301.8e-2351.16Show/hide
Query:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV
        R  GHYANKCP++ KINEL+ID + K QLL +  +DSE+     S EG+ILELQEE+DSYSS++Y  E+ +GKR C GCI VLTKDQE LL+VV+K+ + 
Subjt:  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNV

Query:  ELQKSILHSLKNSILENRDQEEQSNFQPY
        E+Q+ I   L++++  ++  E +    PY
Subjt:  ELQKSILHSLKNSILENRDQEEQSNFQPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGTTCTAGAGGCAAAGGGAAAGCGATTCCAATTTCCGAAGATCATGAAGATCACAAAAGTGATTCAAATTCAAAACTATCAAACACCACCAATCAAGAACTATC
TATAGCAAAGATAGAAGATAAACTCCATCAATGGAATATTCCAAAGATCACCAGAAACCCAACGTGGAGGCTCACAGAAGCTTTCACTCCTCCAAAAAAGAATTCAAACC
TTGCTCAAATTATCGAACATCCAGATGGATCAGTAGAAGTTCAATTTTCTGAAGAACCAAACAGATCAAATGGACATTATGCCAATAAATGTCCAATGAAAAAGAAGATC
AATGAATTAGAAATTGATAATGATACAAAGCAACAGCTTTTGAGTATCATTCAATCTGATTCAGAAGAGTCAATAATTTATAGTTCGGATGAAGGTCAAATTCTTGAATT
ACAAGAAGAAACAGATTCGTATTCTAGTAGTGATTATAATGACGAAGAATACGATGGCAAACGAGTCTGCTCAGGATGCATATGTGTCTTGACGAAAGACCAAGAAACTC
TACTCGATGTTGTTGACAAGATAGACAACGTCGAACTCCAAAAGTCAATCTTACATAGCTTAAAAAACTCAATTCTTGAAAATAGAGATCAAGAAGAACAGAGTAACTTT
CAACCTTATGAATGGAAGAATGTTTTCAAAAAATTTGAAGAACCAAAACCAGTTACCATTCAAGATCTTCAAGCTGAGATTAATATTCTAAAAGAGAAGTCTCAGAACTC
AAAAGAAATACTGATCAAGAAATTTTTCATCTCCTTCAAGAAATATCTCAAATCAAAACCGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGTTCTAGAGGCAAAGGGAAAGCGATTCCAATTTCCGAAGATCATGAAGATCACAAAAGTGATTCAAATTCAAAACTATCAAACACCACCAATCAAGAACTATC
TATAGCAAAGATAGAAGATAAACTCCATCAATGGAATATTCCAAAGATCACCAGAAACCCAACGTGGAGGCTCACAGAAGCTTTCACTCCTCCAAAAAAGAATTCAAACC
TTGCTCAAATTATCGAACATCCAGATGGATCAGTAGAAGTTCAATTTTCTGAAGAACCAAACAGATCAAATGGACATTATGCCAATAAATGTCCAATGAAAAAGAAGATC
AATGAATTAGAAATTGATAATGATACAAAGCAACAGCTTTTGAGTATCATTCAATCTGATTCAGAAGAGTCAATAATTTATAGTTCGGATGAAGGTCAAATTCTTGAATT
ACAAGAAGAAACAGATTCGTATTCTAGTAGTGATTATAATGACGAAGAATACGATGGCAAACGAGTCTGCTCAGGATGCATATGTGTCTTGACGAAAGACCAAGAAACTC
TACTCGATGTTGTTGACAAGATAGACAACGTCGAACTCCAAAAGTCAATCTTACATAGCTTAAAAAACTCAATTCTTGAAAATAGAGATCAAGAAGAACAGAGTAACTTT
CAACCTTATGAATGGAAGAATGTTTTCAAAAAATTTGAAGAACCAAAACCAGTTACCATTCAAGATCTTCAAGCTGAGATTAATATTCTAAAAGAGAAGTCTCAGAACTC
AAAAGAAATACTGATCAAGAAATTTTTCATCTCCTTCAAGAAATATCTCAAATCAAAACCGAAGTAG
Protein sequenceShow/hide protein sequence
MLSSRGKGKAIPISEDHEDHKSDSNSKLSNTTNQELSIAKIEDKLHQWNIPKITRNPTWRLTEAFTPPKKNSNLAQIIEHPDGSVEVQFSEEPNRSNGHYANKCPMKKKI
NELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNF
QPYEWKNVFKKFEEPKPVTIQDLQAEINILKEKSQNSKEILIKKFFISFKKYLKSKPK