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Lag0015861 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015861
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:27376946..27378514
RNA-Seq ExpressionLag0015861
SyntenyLag0015861
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC72938.1 hypothetical protein OsI_06800 [Oryza sativa Indica Group]3.0e-2332.6Show/hide
Query:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS
        E+  +G  W+IGNGK +++ +DPWI R  S  P       + ++VS +++ + SW  D I  +  P D E I+N  +      D I W+ +    FSV+S
Subjt:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS

Query:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
         YHLA ++   ++ SSSS       W + WK  +  K K+ AWR I +S+PT  N  K+ ++ + +C  C    E  +H +
Subjt:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

EEC84030.1 hypothetical protein OsI_30257 [Oryza sativa Indica Group]4.0e-2333.15Show/hide
Query:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS
        E+  +G  W IGNGK +K+ +DPWI R  S  P       + ++VS +++ +GSW  D I  +  P D E I+N  +     +D I W+ +    FSV+S
Subjt:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS

Query:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
         YHLA ++   +  SSSS       W + WK  +  K K+ AWR I +S+ T  N  K+ ++ + +C  C    E  +H +
Subjt:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

KAE8809075.1 retrotransposon unclassified [Hordeum vulgare]1.4e-2329.86Show/hide
Query:  GNGGGVWRPAAPTRALAAATTGCEGEDEVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDII
        GN   VWR             G E   E+  +G  W++GNG +I++ +DPWI R    +P       + + VS  L+  G W++D+++ +    D E I+
Subjt:  GNGGGVWRPAAPTRALAAATTGCEGEDEVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDII

Query:  NTVVGGDNFKDEIIWNYEDKCSFSVKSVYHLATSIQNSEQASSSSKKDPI---PLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFC
          ++    ++D I W +E     +VKS YHLA +I   +    SS  +P    P+W+  W  K +PK K+ AW+++  S+PT +   ++  D N  C  C
Subjt:  NTVVGGDNFKDEIIWNYEDKCSFSVKSVYHLATSIQNSEQASSSSKKDPI---PLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFC

Query:  RKYEESTIHTI
         + +ES+ H +
Subjt:  RKYEESTIHTI

KAG8387873.1 hypothetical protein BUALT_Bualt02G0066800 [Buddleja alternifolia]5.2e-2332.96Show/hide
Query:  EGYRWKIGNGKHIKIDKDPWI-SRKGSGVPYWIDEVLKGQYVSSILNSN-GSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVY
        +G RW++GNG+ I I  DPW+ S  G  +      +     V+S++N N G W  D+I     P D   I    +G +N +D +IWN+     F+V+S Y
Subjt:  EGYRWKIGNGKHIKIDKDPWI-SRKGSGVPYWIDEVLKGQYVSSILNSN-GSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVY

Query:  HLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
        HLA  I     ASSS+ K P   W+  WK +  PK ++ AW+   D++PT++N++ + ++    C  C    E   H +
Subjt:  HLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

XP_030502375.1 uncharacterized protein LOC115717530 [Cannabis sativa]8.8e-2328.81Show/hide
Query:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL
        +G RWK+G+G+HI+ D DPWI    + +P+       G  V+++++    W + ++  + SP+D + I+   +   + +D +IW++     ++V S YHL
Subjt:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL

Query:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
         + +   +Q+SSS        WK FW ++  PK K+ AW+ +HD++P ++ ++K+ +  +  C  C++  ES  H +
Subjt:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

TrEMBL top hitse value%identityAlignment
A0A803NGM9 Uncharacterized protein2.3e-2432.94Show/hide
Query:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS
        +V   GYRW++GNG+++++ +DPW+ R  S   Y    + +  YV+ + N +GSW  + +++  +  D E I++    G + +D+I+W+Y     ++VKS
Subjt:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS

Query:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFC
         Y +ATS+  SEQ  S  +   +  WK+ W++K  PK K   W+++++ IPT++N+ K+G+D + +C  C
Subjt:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFC

A0A803P996 Uncharacterized protein7.8e-2532.77Show/hide
Query:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL
        +G RWK+G+G+HI+   DPWI    + +P+       G  VS+++     W L  +Q + S  D E I++  +   + +D +IW++     ++VKS YHL
Subjt:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL

Query:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
        A  I   +Q+SSS++      WK FW ++  PK K+ AWR IHD++P +++++K+ +  +  C  C++  ES  H +
Subjt:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

A0A803PUL2 Uncharacterized protein1.0e-2432.2Show/hide
Query:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL
        +G RWKIG G+ I+   DPWI R  S +P        G  V++++     W   ++Q Y SP D + I+   +     +D++IW++    +F+V+S YHL
Subjt:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL

Query:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
        ATS+++ + +S+S+    +  WK FW ++   K K+  WR IHD++P +++++++ I  +  C  C++  EST H +
Subjt:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

A0A803QC75 Uncharacterized protein3.0e-2431.64Show/hide
Query:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL
        +G RWK+G+G+HI+   DPWI    + +P+       G  VS+++     W L +++ + S  D E I++  +   + +D +IW++     ++VKS YHL
Subjt:  EGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHL

Query:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
        A  +   +Q+SSS++      WK FW ++  PK K+ AWR IHD++P +++++K+ +  +  C  C++  ES  H +
Subjt:  ATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

A0A803QEG9 Uncharacterized protein4.1e-2632.04Show/hide
Query:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS
        E+   G RWKIG G+ ++   DPW+    S +P        G  V++++     W + ++Q Y  P D E I+   +     +D++IW++    +F+V+S
Subjt:  EVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSDQEDIINTVVGGDNFKDEIIWNYEDKCSFSVKS

Query:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI
         YHLATS++N + +SSS+    +  WK FW ++   K K+ AWR+IHD++P +++++++ I  +  C  C++  EST H +
Subjt:  VYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTIHTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAAAAGAAGAAGAAAGGAGGAGAAAAAATAAAGAAAAATGGTAACGGTGGCGGCGTCTGGCGTCCGGCAGCTCCAACGAGGGCTCTGGCGGCGGCGACGACAGG
TTGTGAAGGTGAAGATGAAGTTGAAGGTGAAGGTTATAGATGGAAAATTGGAAATGGCAAGCACATTAAGATTGATAAAGACCCTTGGATTTCTAGGAAAGGTTCGGGAG
TCCCCTATTGGATCGACGAGGTCCTAAAAGGCCAGTATGTATCCTCCATTCTCAATAGCAACGGCAGTTGGAAGCTAGATGTCATTCAAGCCTATATTAGCCCCTCCGAC
CAAGAAGATATTATAAACACAGTGGTGGGAGGTGACAATTTCAAAGACGAGATTATTTGGAATTACGAAGATAAATGCTCTTTCTCTGTCAAAAGTGTCTACCACTTGGC
CACTTCTATTCAAAACAGCGAGCAAGCCTCGTCCTCTAGCAAGAAAGATCCGATCCCATTGTGGAAAAGCTTCTGGAAGATCAAGTCAATTCCTAAAGCCAAACTGTGTG
CCTGGAGAATCATTCACGATTCCATTCCAACTTCTTCCAATATCATGAAAAAGGGAATTGATGCTAACCCTTTGTGTTATTTTTGCAGGAAATACGAGGAATCAACTATC
CACACAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAAAAGAAGAAGAAAGGAGGAGAAAAAATAAAGAAAAATGGTAACGGTGGCGGCGTCTGGCGTCCGGCAGCTCCAACGAGGGCTCTGGCGGCGGCGACGACAGG
TTGTGAAGGTGAAGATGAAGTTGAAGGTGAAGGTTATAGATGGAAAATTGGAAATGGCAAGCACATTAAGATTGATAAAGACCCTTGGATTTCTAGGAAAGGTTCGGGAG
TCCCCTATTGGATCGACGAGGTCCTAAAAGGCCAGTATGTATCCTCCATTCTCAATAGCAACGGCAGTTGGAAGCTAGATGTCATTCAAGCCTATATTAGCCCCTCCGAC
CAAGAAGATATTATAAACACAGTGGTGGGAGGTGACAATTTCAAAGACGAGATTATTTGGAATTACGAAGATAAATGCTCTTTCTCTGTCAAAAGTGTCTACCACTTGGC
CACTTCTATTCAAAACAGCGAGCAAGCCTCGTCCTCTAGCAAGAAAGATCCGATCCCATTGTGGAAAAGCTTCTGGAAGATCAAGTCAATTCCTAAAGCCAAACTGTGTG
CCTGGAGAATCATTCACGATTCCATTCCAACTTCTTCCAATATCATGAAAAAGGGAATTGATGCTAACCCTTTGTGTTATTTTTGCAGGAAATACGAGGAATCAACTATC
CACACAATCTGA
Protein sequenceShow/hide protein sequence
MREKKKKGGEKIKKNGNGGGVWRPAAPTRALAAATTGCEGEDEVEGEGYRWKIGNGKHIKIDKDPWISRKGSGVPYWIDEVLKGQYVSSILNSNGSWKLDVIQAYISPSD
QEDIINTVVGGDNFKDEIIWNYEDKCSFSVKSVYHLATSIQNSEQASSSSKKDPIPLWKSFWKIKSIPKAKLCAWRIIHDSIPTSSNIMKKGIDANPLCYFCRKYEESTI
HTI