; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015870 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015870
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr12:27583130..27584106
RNA-Seq ExpressionLag0015870
SyntenyLag0015870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035612.1 No apical meristem (NAM) protein [Cucumis melo var. makuwa]1.9e-3240.35Show/hide
Query:  SLIIQEEHQRSARILSLPTAPTDPIALLATDN-----------------------------SKRCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVA-
        SL+IQEE QRSA IL   T P DP+AL  T N                             + +CYK HGYPPGYKPR+  P  N++   + + TNS A 
Subjt:  SLIIQEEHQRSARILSLPTAPTDPIALLATDN-----------------------------SKRCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVA-

Query:  --SSNFFSSLTPSQCSQLMEMLNSQLQSA--------------TGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFK
          S +FFSSL   Q SQLM +LN+ LQ+A                I+SL S +  S  D WI+  GAS+H+CH++ LF NW   + + V+LP  +R++  
Subjt:  --SSNFFSSLTPSQCSQLMEMLNSQLQSA--------------TGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFK

Query:  HIGNVYISDNLILRDVLYIPQFAYNLLS
         IG++ I+ +L+L+DVL++PQFAY+L+S
Subjt:  HIGNVYISDNLILRDVLYIPQFAYNLLS

KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.7e-4940.6Show/hide
Query:  MCVETYYTKLKTIWQDLTDYMPT----------------------------------IAQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIA
        + +ETYYTKLKTIWQ+L +Y  T                                   AQILLM+ +  IN VFSL+IQEE QRSA IL   T P DP+A
Subjt:  MCVETYYTKLKTIWQDLTDYMPT----------------------------------IAQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIA

Query:  L-------LATDNSK------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSN---------FFSSLTPSQCSQLMEMLNS
        L       ++TD ++                  +CYK HGYPPGYKPR+    N+ T+    S TN+VA++N         FFSSL   Q SQLM +LN+
Subjt:  L-------LATDNSK------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSN---------FFSSLTPSQCSQLMEMLNS

Query:  QLQSAT--------------GIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAY
         LQ+AT              GI++L S +  S  D WI+D GAS+HICH++ LF NW   + + V+LP  +R++   IG++ I+ +L L+DVL++ QFAY
Subjt:  QLQSAT--------------GIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAY

Query:  NLLSVSCLLNSGDINVNLCGTYCLIQDKSSLKMIG
        NL+SVSCLL + +I+++   T C+IQD S   MIG
Subjt:  NLLSVSCLLNSGDINVNLCGTYCLIQDKSSLKMIG

KYP60497.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.6e-2831.25Show/hide
Query:  VETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSARIL-SLPTAPTDPIAL
        + TYYTKLK+IW++L+DY PT                                    QILL   +  I +VFSL++Q+E QR   +  SL  A +D IA 
Subjt:  VETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSARIL-SLPTAPTDPIAL

Query:  L------ATDNSK--------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQSATGIY
               AT  ++                     CYKL GYPP Y     T   N+ +    S  N + S +  S+LTP QC QL+  L +Q+Q+ T + 
Subjt:  L------ATDNSK--------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQSATGIY

Query:  SLASS--------SVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDIN
        ++A++        ++D+    WI+D GA+ HIC  + LFH++  +    V+LP S +V  + IG++ I+D++ L +VLYIP F + LLS+  L+N     
Subjt:  SLASS--------SVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDIN

Query:  VNLCGTYCLIQDKSSLKMIG
          +      +QD  +L+ IG
Subjt:  VNLCGTYCLIQDKSSLKMIG

KYP66809.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]2.3e-3033.02Show/hide
Query:  VETYYTKLKTIWQDLTDYMPTI----------------------------AQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIALLAT----
        V TYYTKLK+IW++L+ Y PT+                             QILL   +  I +VFSLI+QE+ QR   I+   TA ++ IA        
Subjt:  VETYYTKLKTIWQDLTDYMPTI----------------------------AQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIALLAT----

Query:  ---DNSK----------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNF--FSSLTPSQCSQLMEMLNSQLQSATGIYSL
           DNSK                      RCYKL GYPP Y         N T      V NS+ SS     S+LTP+QC QL+  + +Q+++ T + ++
Subjt:  ---DNSK----------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNF--FSSLTPSQCSQLMEMLNSQLQSATGIYSL

Query:  ASSSVDSL--------SDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDINVN
        AS+ + +         S  WI+D GA+ HIC ++ L++++  +    V+LP S +VN + IG++ I+D++ L +VLYIP F +NLLS+  L+N+      
Subjt:  ASSSVDSL--------SDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDINVN

Query:  LCGTYCLIQDKSSLKMIG
        +     L+QD  +L+ IG
Subjt:  LCGTYCLIQDKSSLKMIG

KZV37633.1 hypothetical protein F511_38248 [Dorcoceras hygrometricum]8.7e-3030.91Show/hide
Query:  MCVETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSAR------------I
        M + +YYTKL+ +W +L DY PT                                   AQ+L+M+ +  I+ VF+L++QEE QRS               
Subjt:  MCVETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSAR------------I

Query:  LSLPTAPTDPIALLATDNSK--------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQ-----
        L+  T+ T P    A    K              +CYKLHGYPPG+          +    Q S+      +    +LT SQC QL+E L+S+LQ     
Subjt:  LSLPTAPTDPIALLATDNSK--------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQ-----

Query:  ------------SATGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSV
                      TGI S  S +       W++D GA+ HIC +  +FH+ R V    ++LP +  +    IG+V+++ +LIL DVLY+P+F +NLLS+
Subjt:  ------------SATGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSV

Query:  SCLLNSGDINVNLCGTYCLIQDKSSLKMIG
        S L N+ + +V+     C IQD    KMIG
Subjt:  SCLLNSGDINVNLCGTYCLIQDKSSLKMIG

TrEMBL top hitse value%identityAlignment
A0A151T0D0 Retrovirus-related Pol polyprotein from transposon TNT 1-947.9e-2931.25Show/hide
Query:  VETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSARIL-SLPTAPTDPIAL
        + TYYTKLK+IW++L+DY PT                                    QILL   +  I +VFSL++Q+E QR   +  SL  A +D IA 
Subjt:  VETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSARIL-SLPTAPTDPIAL

Query:  L------ATDNSK--------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQSATGIY
               AT  ++                     CYKL GYPP Y     T   N+ +    S  N + S +  S+LTP QC QL+  L +Q+Q+ T + 
Subjt:  L------ATDNSK--------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQSATGIY

Query:  SLASS--------SVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDIN
        ++A++        ++D+    WI+D GA+ HIC  + LFH++  +    V+LP S +V  + IG++ I+D++ L +VLYIP F + LLS+  L+N     
Subjt:  SLASS--------SVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDIN

Query:  VNLCGTYCLIQDKSSLKMIG
          +      +QD  +L+ IG
Subjt:  VNLCGTYCLIQDKSSLKMIG

A0A151TIF3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-3033.02Show/hide
Query:  VETYYTKLKTIWQDLTDYMPTI----------------------------AQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIALLAT----
        V TYYTKLK+IW++L+ Y PT+                             QILL   +  I +VFSLI+QE+ QR   I+   TA ++ IA        
Subjt:  VETYYTKLKTIWQDLTDYMPTI----------------------------AQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIALLAT----

Query:  ---DNSK----------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNF--FSSLTPSQCSQLMEMLNSQLQSATGIYSL
           DNSK                      RCYKL GYPP Y         N T      V NS+ SS     S+LTP+QC QL+  + +Q+++ T + ++
Subjt:  ---DNSK----------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNF--FSSLTPSQCSQLMEMLNSQLQSATGIYSL

Query:  ASSSVDSL--------SDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDINVN
        AS+ + +         S  WI+D GA+ HIC ++ L++++  +    V+LP S +VN + IG++ I+D++ L +VLYIP F +NLLS+  L+N+      
Subjt:  ASSSVDSL--------SDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSVSCLLNSGDINVN

Query:  LCGTYCLIQDKSSLKMIG
        +     L+QD  +L+ IG
Subjt:  LCGTYCLIQDKSSLKMIG

A0A2Z7BSS5 Integrase catalytic domain-containing protein4.2e-3030.91Show/hide
Query:  MCVETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSAR------------I
        M + +YYTKL+ +W +L DY PT                                   AQ+L+M+ +  I+ VF+L++QEE QRS               
Subjt:  MCVETYYTKLKTIWQDLTDYMPTI----------------------------------AQILLMKSISPINDVFSLIIQEEHQRSAR------------I

Query:  LSLPTAPTDPIALLATDNSK--------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQ-----
        L+  T+ T P    A    K              +CYKLHGYPPG+          +    Q S+      +    +LT SQC QL+E L+S+LQ     
Subjt:  LSLPTAPTDPIALLATDNSK--------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSNFFSSLTPSQCSQLMEMLNSQLQ-----

Query:  ------------SATGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSV
                      TGI S  S +       W++D GA+ HIC +  +FH+ R V    ++LP +  +    IG+V+++ +LIL DVLY+P+F +NLLS+
Subjt:  ------------SATGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNLLSV

Query:  SCLLNSGDINVNLCGTYCLIQDKSSLKMIG
        S L N+ + +V+     C IQD    KMIG
Subjt:  SCLLNSGDINVNLCGTYCLIQDKSSLKMIG

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 88.2e-5040.6Show/hide
Query:  MCVETYYTKLKTIWQDLTDYMPT----------------------------------IAQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIA
        + +ETYYTKLKTIWQ+L +Y  T                                   AQILLM+ +  IN VFSL+IQEE QRSA IL   T P DP+A
Subjt:  MCVETYYTKLKTIWQDLTDYMPT----------------------------------IAQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIA

Query:  L-------LATDNSK------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSN---------FFSSLTPSQCSQLMEMLNS
        L       ++TD ++                  +CYK HGYPPGYKPR+    N+ T+    S TN+VA++N         FFSSL   Q SQLM +LN+
Subjt:  L-------LATDNSK------------------RCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVASSN---------FFSSLTPSQCSQLMEMLNS

Query:  QLQSAT--------------GIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAY
         LQ+AT              GI++L S +  S  D WI+D GAS+HICH++ LF NW   + + V+LP  +R++   IG++ I+ +L L+DVL++ QFAY
Subjt:  QLQSAT--------------GIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAY

Query:  NLLSVSCLLNSGDINVNLCGTYCLIQDKSSLKMIG
        NL+SVSCLL + +I+++   T C+IQD S   MIG
Subjt:  NLLSVSCLLNSGDINVNLCGTYCLIQDKSSLKMIG

A0A5D3E5P0 No apical meristem (NAM) protein9.1e-3340.35Show/hide
Query:  SLIIQEEHQRSARILSLPTAPTDPIALLATDN-----------------------------SKRCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVA-
        SL+IQEE QRSA IL   T P DP+AL  T N                             + +CYK HGYPPGYKPR+  P  N++   + + TNS A 
Subjt:  SLIIQEEHQRSARILSLPTAPTDPIALLATDN-----------------------------SKRCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVA-

Query:  --SSNFFSSLTPSQCSQLMEMLNSQLQSA--------------TGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFK
          S +FFSSL   Q SQLM +LN+ LQ+A                I+SL S +  S  D WI+  GAS+H+CH++ LF NW   + + V+LP  +R++  
Subjt:  --SSNFFSSLTPSQCSQLMEMLNSQLQSA--------------TGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFK

Query:  HIGNVYISDNLILRDVLYIPQFAYNLLS
         IG++ I+ +L+L+DVL++PQFAY+L+S
Subjt:  HIGNVYISDNLILRDVLYIPQFAYNLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTTGAAACATACTACACGAAGCTGAAGACGATTTGGCAAGATCTTACCGATTACATGCCTACTATTGCTCAAATACTTCTTATGAAGTCGATTTCGCCAATTAA
TGATGTTTTTTCTCTTATTATCCAAGAAGAGCATCAAAGGTCTGCTAGAATTCTTTCTTTGCCAACAGCTCCGACAGATCCAATTGCTCTTCTTGCTACTGATAATTCAA
AAAGATGTTATAAGCTTCATGGCTATCCACCTGGCTATAAACCTAGATCTGTCACGCCACCCAATAATTCTACTTCAATTGCTCAGCCATCAGTAACTAATTCGGTTGCC
TCATCGAATTTCTTCTCAAGTCTAACTCCTAGCCAGTGTTCACAATTGATGGAAATGCTCAATTCTCAACTTCAATCGGCTACAGGTATTTATTCGTTGGCTTCTTCGTC
TGTTGATTCTCTTAGTGATTGCTGGATAGTTGATTTTGGTGCTTCGAAACATATATGTCATAATCGGAGGTTATTTCACAATTGGCGTCGTGTTGATATGATTTTAGTTA
TACTCCCTACTTCTTATCGAGTTAATTTCAAGCATATTGGAAACGTTTATATCTCAGACAACTTAATATTACGTGATGTCCTATATATACCACAATTTGCTTATAATCTT
CTGTCGGTCAGTTGCTTGTTGAATTCTGGTGATATCAATGTTAATTTATGTGGAACCTATTGCTTGATACAAGACAAATCCAGTTTGAAGATGATTGGGCCCCGTTATTC
CCCTGTGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTTGAAACATACTACACGAAGCTGAAGACGATTTGGCAAGATCTTACCGATTACATGCCTACTATTGCTCAAATACTTCTTATGAAGTCGATTTCGCCAATTAA
TGATGTTTTTTCTCTTATTATCCAAGAAGAGCATCAAAGGTCTGCTAGAATTCTTTCTTTGCCAACAGCTCCGACAGATCCAATTGCTCTTCTTGCTACTGATAATTCAA
AAAGATGTTATAAGCTTCATGGCTATCCACCTGGCTATAAACCTAGATCTGTCACGCCACCCAATAATTCTACTTCAATTGCTCAGCCATCAGTAACTAATTCGGTTGCC
TCATCGAATTTCTTCTCAAGTCTAACTCCTAGCCAGTGTTCACAATTGATGGAAATGCTCAATTCTCAACTTCAATCGGCTACAGGTATTTATTCGTTGGCTTCTTCGTC
TGTTGATTCTCTTAGTGATTGCTGGATAGTTGATTTTGGTGCTTCGAAACATATATGTCATAATCGGAGGTTATTTCACAATTGGCGTCGTGTTGATATGATTTTAGTTA
TACTCCCTACTTCTTATCGAGTTAATTTCAAGCATATTGGAAACGTTTATATCTCAGACAACTTAATATTACGTGATGTCCTATATATACCACAATTTGCTTATAATCTT
CTGTCGGTCAGTTGCTTGTTGAATTCTGGTGATATCAATGTTAATTTATGTGGAACCTATTGCTTGATACAAGACAAATCCAGTTTGAAGATGATTGGGCCCCGTTATTC
CCCTGTGACCTGA
Protein sequenceShow/hide protein sequence
MCVETYYTKLKTIWQDLTDYMPTIAQILLMKSISPINDVFSLIIQEEHQRSARILSLPTAPTDPIALLATDNSKRCYKLHGYPPGYKPRSVTPPNNSTSIAQPSVTNSVA
SSNFFSSLTPSQCSQLMEMLNSQLQSATGIYSLASSSVDSLSDCWIVDFGASKHICHNRRLFHNWRRVDMILVILPTSYRVNFKHIGNVYISDNLILRDVLYIPQFAYNL
LSVSCLLNSGDINVNLCGTYCLIQDKSSLKMIGPRYSPVT