; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015873 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015873
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr12:27656575..27657270
RNA-Seq ExpressionLag0015873
SyntenyLag0015873
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030477990.1 uncharacterized protein LOC115695032 [Cannabis sativa]6.4e-1730.16Show/hide
Query:  LLKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW--IGMNISDEA-IWNDR
        LL ++  +S S     WW   W+L  P ++K F W++ H  +P A  L++       +CSLC    ES  HA+F C  AR VW  +G + ++ A IW+DR
Subjt:  LLKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW--IGMNISDEA-IWNDR

Query:  NNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKG-----HPGQEISQMIAQGEEYFMHVDAACDLANQCCSIGVVLRNRYGQLLLA
        NN IH +L     +     H +L  ++ A Q     G      P    +          ++VD A D A      G ++R+  G++L A
Subjt:  NNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKG-----HPGQEISQMIAQGEEYFMHVDAACDLANQCCSIGVVLRNRYGQLLLA

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]1.9e-1628.38Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW------------IGMNIS
        L++   SS S+    WW   W+L  P +IK F WR FH  +P A +L R H+  D  CS+C +  ES  HALF C  A+AVW            + MN  
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW------------IGMNIS

Query:  DE---------------------AIWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQR---------QNRKGHPGQEISQMIAQGEEYFMHVDAACD
        D                      +IW +RN  IH +      +   +   YL  + +A  +         QN    P  +            M+VDAA +
Subjt:  DE---------------------AIWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQR---------QNRKGHPGQEISQMIAQGEEYFMHVDAACD

Query:  LANQCCSIGVVLRNRYGQLLLA
         +     IG V+RN  G ++ A
Subjt:  LANQCCSIGVVLRNRYGQLLLA

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]5.4e-1629.28Show/hide
Query:  SDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW------------IGMNISDEAI-----
        S  +  WW   W L  P ++K FVW++FH+ IPTA +L    +     CSLC    ES  HAL  C  A+ VW              M  SD  +     
Subjt:  SDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW------------IGMNISDEAI-----

Query:  ----------------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKGHPGQEISQMIAQG------------EEYFMHVDAACDLANQCC
                        W DRNN IH +  P++     W        K+A    N + H   + S MI+ G             E  M+VDAACD++    
Subjt:  ----------------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKGHPGQEISQMIAQG------------EEYFMHVDAACDLANQCC

Query:  SIGVVLRNRYGQLLLASHQGST
         +G+++RN  GQ++ A  +  T
Subjt:  SIGVVLRNRYGQLLLASHQGST

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]1.9e-1626.55Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDE----------
        L  +  S+CS+    WWS  W+L  P +++ FVW+ FH  +P A  L+R H++    C++C    E+ +HALF C RA+AVW   N S +          
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDE----------

Query:  -----------------------AIWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNR------KGHPGQEISQMIAQGE-------EYFMHVD
                               +IW++RN   H   +        +   YL EF+ A  +  +         P +  S+ I   +          ++ D
Subjt:  -----------------------AIWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNR------KGHPGQEISQMIAQGE-------EYFMHVD

Query:  AACDLANQCCSIGVVLRNRYGQLLLA
        AA D       IG VLRN  G ++ A
Subjt:  AACDLANQCCSIGVVLRNRYGQLLLA

XP_030509188.1 uncharacterized protein LOC115723863 [Cannabis sativa]1.6e-1527.36Show/hide
Query:  WWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW-------------------------IGMNISDE
        WWS  W++  P +++ FVW+ FH  +P A  L+R H++   +CS+C    ES NHALF C RA+AVW                           ++ S+ 
Subjt:  WWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW-------------------------IGMNISDE

Query:  AI--------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNR---------KGHPGQEISQ-----MIAQGEEYFMHVDAACDLANQCCSIGV
         +        W++RN   H   +   +    +   YL EF+NA  ++++            P  E +         QG    ++ DAA D A     IG 
Subjt:  AI--------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNR---------KGHPGQEISQ-----MIAQGEEYFMHVDAACDLANQCCSIGV

Query:  VLRNRYGQLLLA
         LRN  G ++ A
Subjt:  VLRNRYGQLLLA

TrEMBL top hitse value%identityAlignment
A0A803NI87 Uncharacterized protein2.6e-1629.28Show/hide
Query:  SDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW------------IGMNISDEAI-----
        S  +  WW   W L  P ++K FVW++FH+ IPTA +L    +     CSLC    ES  HAL  C  A+ VW              M  SD  +     
Subjt:  SDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW------------IGMNISDEAI-----

Query:  ----------------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKGHPGQEISQMIAQG------------EEYFMHVDAACDLANQCC
                        W DRNN IH +  P++     W        K+A    N + H   + S MI+ G             E  M+VDAACD++    
Subjt:  ----------------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKGHPGQEISQMIAQG------------EEYFMHVDAACDLANQCC

Query:  SIGVVLRNRYGQLLLASHQGST
         +G+++RN  GQ++ A  +  T
Subjt:  SIGVVLRNRYGQLLLASHQGST

A0A803P119 Uncharacterized protein2.4e-1729.3Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW----------IGMNISDE
        ++++ S S S+L  KWWS  W LN P ++K F WR  H  +P A NL++ H++ D  CS C    ES NHA F C +A+ VW             + SD 
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW----------IGMNISDE

Query:  A-----------------------IWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRK--GHPGQEISQMIAQGEEYFMHVDAACDLANQCCS
                                +W+DRNN++  +   L  I  +    +L EF +   RQ       P    S       +  ++VDAA D A     
Subjt:  A-----------------------IWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRK--GHPGQEISQMIAQGEEYFMHVDAACDLANQCCS

Query:  IGVVLRNRYGQLLLA
        IG ++R+  G ++ A
Subjt:  IGVVLRNRYGQLLLA

A0A803Q2K8 Uncharacterized protein7.7e-1627.36Show/hide
Query:  WWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW-------------------------IGMNISDE
        WWS  W++  P +++ FVW+ FH  +P A  L+R H++   +CS+C    ES NHALF C RA+AVW                           ++ S+ 
Subjt:  WWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW-------------------------IGMNISDE

Query:  AI--------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNR---------KGHPGQEISQ-----MIAQGEEYFMHVDAACDLANQCCSIGV
         +        W++RN   H   +   +    +   YL EF+NA  ++++            P  E +         QG    ++ DAA D A     IG 
Subjt:  AI--------WNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNR---------KGHPGQEISQ-----MIAQGEEYFMHVDAACDLANQCCSIGV

Query:  VLRNRYGQLLLA
         LRN  G ++ A
Subjt:  VLRNRYGQLLLA

A0A803QC00 Uncharacterized protein3.1e-1730.16Show/hide
Query:  LLKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW--IGMNISDEA-IWNDR
        LL ++  +S S     WW   W+L  P ++K F W++ H  +P A  L++       +CSLC    ES  HA+F C  AR VW  +G + ++ A IW+DR
Subjt:  LLKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW--IGMNISDEA-IWNDR

Query:  NNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKG-----HPGQEISQMIAQGEEYFMHVDAACDLANQCCSIGVVLRNRYGQLLLA
        NN IH +L     +     H +L  ++ A Q     G      P    +          ++VD A D A      G ++R+  G++L A
Subjt:  NNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKG-----HPGQEISQMIAQGEEYFMHVDAACDLANQCCSIGVVLRNRYGQLLLA

A0A803QH76 Uncharacterized protein5.9e-1628.7Show/hide
Query:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW---------------IGM
        L +    S S   RKWW+RLW L  P ++K F WR  +  +PTA+NL    ++    C+LC    ES  HALF C RA+ VW                G 
Subjt:  LKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVW---------------IGM

Query:  NISDE------------------AIWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKG--------------HPGQEISQMIAQGEE-YFMH
        +I                      IW++RN  IH        I C +   YL ++K A  +Q                   P +   Q     E  Y ++
Subjt:  NISDE------------------AIWNDRNNTIHNQLIPLVEIRCEWIHGYLFEFKNANQRQNRKG--------------HPGQEISQMIAQGEE-YFMH

Query:  VDAACDLANQCCSIGVVLRNRYG
        VDAAC  A      G +LR+ +G
Subjt:  VDAACDLANQCCSIGVVLRNRYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.0e-0832.95Show/hide
Query:  SRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEAIWNDRNNTIHNQLI
        +R+W L    ++KHF+WR+  + + T   L    + +D +C  C++  ES NHALF C  A   W    +SD ++       I NQL+
Subjt:  SRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEAIWNDRNNTIHNQLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTGAAGAATGAGGCATCCTCATCGTGTTCTGATTTGGAGCGAAAATGGTGGTCCAGACTGTGGAGATTAAATCGTCCATTGCAAATAAAGCATTTTGTCTGGAG
ATCATTTCATAAATGCATTCCAACTGCTATCAATTTGTGGCGTCACCATGTTTCAGTTGATGGGAATTGCTCGTTGTGTTACAAAGGGCCCGAATCTAAAAATCATGCTC
TTTTTCACTGTTCTAGGGCAAGGGCAGTATGGATAGGAATGAATATCAGCGATGAGGCTATTTGGAATGATCGTAATAACACTATACACAATCAACTGATTCCTCTAGTT
GAGATAAGGTGTGAATGGATACATGGATATCTGTTTGAGTTCAAAAATGCAAATCAGCGGCAGAATCGCAAGGGTCATCCAGGTCAGGAAATCAGTCAGATGATTGCCCA
AGGTGAGGAATATTTTATGCATGTTGATGCTGCTTGCGATTTGGCTAATCAGTGTTGTAGCATTGGTGTGGTGCTTCGAAATCGTTATGGGCAGTTGCTGTTAGCATCGC
ATCAGGGGTCAACAATGTTCAGTAGTTCGTGTGTACTGAGGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTGAAGAATGAGGCATCCTCATCGTGTTCTGATTTGGAGCGAAAATGGTGGTCCAGACTGTGGAGATTAAATCGTCCATTGCAAATAAAGCATTTTGTCTGGAG
ATCATTTCATAAATGCATTCCAACTGCTATCAATTTGTGGCGTCACCATGTTTCAGTTGATGGGAATTGCTCGTTGTGTTACAAAGGGCCCGAATCTAAAAATCATGCTC
TTTTTCACTGTTCTAGGGCAAGGGCAGTATGGATAGGAATGAATATCAGCGATGAGGCTATTTGGAATGATCGTAATAACACTATACACAATCAACTGATTCCTCTAGTT
GAGATAAGGTGTGAATGGATACATGGATATCTGTTTGAGTTCAAAAATGCAAATCAGCGGCAGAATCGCAAGGGTCATCCAGGTCAGGAAATCAGTCAGATGATTGCCCA
AGGTGAGGAATATTTTATGCATGTTGATGCTGCTTGCGATTTGGCTAATCAGTGTTGTAGCATTGGTGTGGTGCTTCGAAATCGTTATGGGCAGTTGCTGTTAGCATCGC
ATCAGGGGTCAACAATGTTCAGTAGTTCGTGTGTACTGAGGTGTTAG
Protein sequenceShow/hide protein sequence
MLLKNEASSSCSDLERKWWSRLWRLNRPLQIKHFVWRSFHKCIPTAINLWRHHVSVDGNCSLCYKGPESKNHALFHCSRARAVWIGMNISDEAIWNDRNNTIHNQLIPLV
EIRCEWIHGYLFEFKNANQRQNRKGHPGQEISQMIAQGEEYFMHVDAACDLANQCCSIGVVLRNRYGQLLLASHQGSTMFSSSCVLRC