; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015903 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015903
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr12:28587863..28588231
RNA-Seq ExpressionLag0015903
SyntenyLag0015903
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.8e-1542.16Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G   NVG +I  EI AC  ++   LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VK
         +
Subjt:  VK

PON44141.1 hypothetical protein PanWU01x14_268850 [Parasponia andersonii]4.8e-1540.18Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  GV+W  S       + S L P + VW HF+K+ L+PTTH   +S +RV+LLY ++ G   NVG +I  EI AC  +++  LFF SLIT++C+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VKIVPGKDEEHH
         +     +E+ H
Subjt:  VKIVPGKDEEHH

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.3e-1543.14Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G   NVG +I  EI AC  ++   LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VK
         +
Subjt:  VK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.8e-1542.16Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S + V LLY ++ G   NVG +I  EI AC  +++  LFF SLIT +C+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VK
         +
Subjt:  VK

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.4e-1639.29Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH   +S DR++LL+ ++ G   NVG +I  EI AC  ++   LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VKIVPGKDEEHH
           +  +++ H+
Subjt:  VKIVPGKDEEHH

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-1542.16Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G   NVG +I  EI AC  ++   LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VK
         +
Subjt:  VK

A0A2P5B5S0 Uncharacterized protein2.3e-1540.18Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  GV+W  S       + S L P + VW HF+K+ L+PTTH   +S +RV+LLY ++ G   NVG +I  EI AC  +++  LFF SLIT++C+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VKIVPGKDEEHH
         +     +E+ H
Subjt:  VKIVPGKDEEHH

A0A2P5BCG4 Uncharacterized protein (Fragment)6.2e-1643.14Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G   NVG +I  EI AC  ++   LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VK
         +
Subjt:  VK

A0A2P5CPE8 Uncharacterized protein2.3e-1544.9Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLC
        L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S +RV+LLY ++ G   NVG II  EI A   +++  LFF SLIT++C
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLC

A0A2P5DXM3 Uncharacterized protein2.1e-1639.29Show/hide
Query:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR
        L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH   +S DR++LL+ ++ G   NVG +I  EI AC  ++   LFF SLIT+LC+ 
Subjt:  LKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQR

Query:  VKIVPGKDEEHH
           +  +++ H+
Subjt:  VKIVPGKDEEHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAACACTTAAACTTGTGGCCAACAAGGGAGTTCAATGGAAAGAATCACAGACGAAAGTGAAATCTCTAGTGCCAAGTGACCTAAAGCCAGAATCGGCAGTTTG
GCTTCACTTCATAAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGTATCATGAAGGGGTTGGAGAACAACGTGG
GAAGCATTATCAGGGATGAGATTTTAGCCTGTGTGAGAAAACGAGCAGACAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCGGGC
AAGGACGAGGAGCATCATTTCTTCAAGACCAACTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAACACTTAAACTTGTGGCCAACAAGGGAGTTCAATGGAAAGAATCACAGACGAAAGTGAAATCTCTAGTGCCAAGTGACCTAAAGCCAGAATCGGCAGTTTG
GCTTCACTTCATAAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGTATCATGAAGGGGTTGGAGAACAACGTGG
GAAGCATTATCAGGGATGAGATTTTAGCCTGTGTGAGAAAACGAGCAGACAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCGGGC
AAGGACGAGGAGCATCATTTCTTCAAGACCAACTATTGA
Protein sequenceShow/hide protein sequence
MKETLKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGLENNVGSIIRDEILACVRKRADKLFFGSLITQLCQRVKIVPG
KDEEHHFFKTNY