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Lag0015910 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015910
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr12:28806365..28806760
RNA-Seq ExpressionLag0015910
SyntenyLag0015910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KOM41186.1 hypothetical protein LR48_Vigan04g138400 [Vigna angularis]1.9e-0438.2Show/hide
Query:  FFSAPKYPLPPYIVNPEEGNYVPLPEFIFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSG
        F SA   P PP     ++ +YV     I L+P F+G  G   + H  +F+  C   K P    D   LK FP SLQG AR  ++ LPSG
Subjt:  FFSAPKYPLPPYIVNPEEGNYVPLPEFIFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSG

XP_012480878.1 PREDICTED: uncharacterized protein LOC105795765 [Gossypium raimondii]4.1e-0439.02Show/hide
Query:  PPYIVNPEEGNYVPLPE-FIFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS
        PP I  P     + L   F+ L+P F G PG + Y H  EF  SC   K      +Q KL+ FP+SLQG A+  ++ +P GS
Subjt:  PPYIVNPEEGNYVPLPE-FIFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS

XP_027076958.1 uncharacterized protein LOC113700697 [Coffea arabica]4.1e-0442.86Show/hide
Query:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS
        I L+PSF+G PG E Y H  EF   C   K P    +Q K++ FP+SL+  A+  ++ LP GS
Subjt:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS

XP_027082154.1 uncharacterized protein LOC113704451 [Coffea arabica]4.1e-0442.86Show/hide
Query:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS
        I L+PSF+G PG E Y H  EF   C   K P    +Q K++ FP+SL+  A+  ++ LP GS
Subjt:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS

XP_027090491.1 uncharacterized protein LOC113711532 [Coffea arabica]4.1e-0442.86Show/hide
Query:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS
        I L+PSF+G PG E Y H  EF   C   K P    +Q K++ FP+SL+  A+  ++ LP GS
Subjt:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS

TrEMBL top hitse value%identityAlignment
A0A0L9UEP0 Retrotrans_gag domain-containing protein9.0e-0538.2Show/hide
Query:  FFSAPKYPLPPYIVNPEEGNYVPLPEFIFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSG
        F SA   P PP     ++ +YV     I L+P F+G  G   + H  +F+  C   K P    D   LK FP SLQG AR  ++ LPSG
Subjt:  FFSAPKYPLPPYIVNPEEGNYVPLPEFIFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSG

A0A6P6SAE1 uncharacterized protein LOC1136891692.0e-0443.55Show/hide
Query:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSG
        I L+PSF+G PG E Y H  EF   C   K PE    Q K++ FP+SL+  A+  ++ LP G
Subjt:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSG

A0A6P6TES6 uncharacterized protein LOC1137006972.0e-0442.86Show/hide
Query:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS
        I L+PSF+G PG E Y H  EF   C   K P    +Q K++ FP+SL+  A+  ++ LP GS
Subjt:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS

A0A6P6TUV2 uncharacterized protein LOC1137044512.0e-0442.86Show/hide
Query:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS
        I L+PSF+G PG E Y H  EF   C   K P    +Q K++ FP+SL+  A+  ++ LP GS
Subjt:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS

A0A6P6UJL6 Reverse transcriptase2.0e-0442.86Show/hide
Query:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS
        I L+PSF+G PG E Y H  EF   C   K P    +Q K++ FP+SL+  A+  ++ LP GS
Subjt:  IFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLPSGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCTCACAGACTATCGACCCACTGTCCTCTGAGATAGAAAGGGTCGAGCGTGCAGTGCAAGTCTTCTTTTCAGCTCCTAAATATCCTCTGCCTCCCTACATTGT
TAATCCCGAAGAAGGTAACTATGTGCCCCTACCTGAATTCATTTTCTTAGTTCCTTCTTTTTATGGCGATCCAGGAGCAGAAGCCTATTATCATGCGCTCGAATTCTACT
CAAGTTGCTTCAAGAGGAAAACCCCAGAGACATATGTAGATCAATCTAAGTTGAAGGTGTTTCCATATTCACTACAAGGGGAAGCTAGAACGCGAATTTTCTCATTACCT
TCAGGTTCGGAAAAACTTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAATAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATCTCACAGACTATCGACCCACTGTCCTCTGAGATAGAAAGGGTCGAGCGTGCAGTGCAAGTCTTCTTTTCAGCTCCTAAATATCCTCTGCCTCCCTACATTGT
TAATCCCGAAGAAGGTAACTATGTGCCCCTACCTGAATTCATTTTCTTAGTTCCTTCTTTTTATGGCGATCCAGGAGCAGAAGCCTATTATCATGCGCTCGAATTCTACT
CAAGTTGCTTCAAGAGGAAAACCCCAGAGACATATGTAGATCAATCTAAGTTGAAGGTGTTTCCATATTCACTACAAGGGGAAGCTAGAACGCGAATTTTCTCATTACCT
TCAGGTTCGGAAAAACTTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAATAATATAG
Protein sequenceShow/hide protein sequence
MDISQTIDPLSSEIERVERAVQVFFSAPKYPLPPYIVNPEEGNYVPLPEFIFLVPSFYGDPGAEAYYHALEFYSSCFKRKTPETYVDQSKLKVFPYSLQGEARTRIFSLP
SGSEKLDVDFSYRKRTGQVII