; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015923 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015923
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr12:29277011..29277950
RNA-Seq ExpressionLag0015923
SyntenyLag0015923
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.5e-0637.63Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV
        V F    IN +Y +K   N  G+ +  NP A+ + +AL+ +   G +W    T+   L  +DL  E +VWL FIK  +MPT H+STIS++ I+
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]1.1e-0938.71Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV
        VSFS+ DIN +Y++K      GN +I +P+ +QM +AL+++   G++W  S   V +L S  L  E  +W+  +K RL+ TTH+ T+S DR++
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]6.4e-1038.64Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTIS
        V FS+ DIN +Y++K  L+  GN +I +P    M + L+++   G QW  S   +K+L S+ L PE+ +W+  +K RL+PT+H  T+S
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTIS

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]1.0e-0734.04Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIVP
        V FS+ +IN +Y+++   +  GN +I +P+ + M  ALK++A  G +W  S   +++L S  L  +  +W+  +K +L+PTTH+ T+S D+ +P
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIVP

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]2.0e-1138.3Show/hide
Query:  MVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV
        +V FS+ DIN +Y++K   +  GN +I +P  ++M +AL+ +   G QW  S   +K+L SS L PE+ +W+  +K R++PT+H+ T+S DR++
Subjt:  MVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.9e-0533.33Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV
        VS+S   IN V+ +  P++   ++ I N +   ++  L+ VA  G +W  S     + + S L P + VW +F+K+ L+PTTH  T+S DR++
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV

A0A2P5DXM3 Uncharacterized protein2.1e-0625.62Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDR------IVP
        VS+S   IN V+ +  P++   ++ I N +  +++  L+ VA  G +W  S     + + S L P + VW +F+K+RL+PTTH   +S DR      ++ 
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDR------IVP

Query:  GK---------DEERHFVKPTIDL----SLIGKLQQN-----------NIQMKDEASTSQATPQSGPNIASSSQHTPFTGPSLASKALGMVHRQLDQIRE
        GK          E R             SLI +L +N           N    D  + ++ T Q GP  ++    +     + +S+  G V +QL  + +
Subjt:  GK---------DEERHFVKPTIDL----SLIGKLQQN-----------NIQMKDEASTSQATPQSGPNIASSSQHTPFTGPSLASKALGMVHRQLDQIRE

Query:  NL----------KTYWTYAKERDEAIREFYLSIAPSSAPVFP
         L          + +W Y+KERD A+++   +      P FP
Subjt:  NL----------KTYWTYAKERDEAIREFYLSIAPSSAPVFP

A0A5A7U0U4 Uncharacterized protein2.7e-0634.41Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV
        ++F    IN +Y +K   N  G+ + +NP  + + EAL+     G +W +  T +  L   +L  E++VWL FIK  +MPT H++ IS++RI+
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV

A0A5D3CW17 Uncharacterized protein7.1e-0737.63Show/hide
Query:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV
        V F    IN +Y +K   N  G+ +  NP A+ + +AL+ +   G +W    T+   L  +DL  E +VWL FIK  +MPT H+STIS++ I+
Subjt:  VSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIV

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I6.7e-0525Show/hide
Query:  QWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIVPGKDEERHFVKPTIDLSLIGKLQQNNIQMKDEAST----------SQATPQSG
        QW   Q   +++    L+P + +W +F+K++L+PT+H +T+S  R+          V  +ID+  I  ++Q +  +K  AS            +A  +  
Subjt:  QWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIVPGKDEERHFVKPTIDLSLIGKLQQNNIQMKDEAST----------SQATPQSG

Query:  PNIASSSQHTPF--TGPSLASKALGMVHRQLDQIRENLKTYWTYAKERDEAIREFYLSIAPSS---APVFPKTYWTYAKERDEAIREFYLSIAPSSAPVF
            S +  TP     P +  + +     Q++Q+ + + TY++Y K RDE +   ++ I P +    PVFP T    A E  EA  + +    P++  V 
Subjt:  PNIASSSQHTPF--TGPSLASKALGMVHRQLDQIRENLKTYWTYAKERDEAIREFYLSIAPSS---APVFPKTYWTYAKERDEAIREFYLSIAPSSAPVF

Query:  SKTYWTYAKERD-------EAIREFYLSIAPVLSNFPQSLLPQE
          T      + D          RE  L +AP      QS +PQ+
Subjt:  SKTYWTYAKERD-------EAIREFYLSIAPVLSNFPQSLLPQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGTTTCTCCTCAGTCGACATCAACAGGGTGTACAGGATCAAGGCACCCTTGAACCCAAGGGGGAATGATGTGATCAGGAACCCTTCGGCCAAGCAAATGATGGA
AGCACTTAAAATTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCGCAAACAAAAGTGAAGTCTTTAGTGTCAAGCGACCTAAAGCCAGAATCGACAGTGTGGCTTAACT
TCATCAAGAACCGCTTGATGCCAACCACCCACGAAAGCACAATTTCAGTGGATAGAATTGTGCCAGGCAAGGACGAGGAGCGCCATTTTGTTAAACCAACCATTGACTTG
TCCTTGATAGGAAAGCTCCAGCAAAACAACATCCAGATGAAGGATGAAGCCTCCACATCACAAGCCACTCCTCAATCAGGGCCAAATATAGCTTCTTCATCCCAGCACAC
TCCTTTTACAGGGCCTTCACTAGCATCGAAAGCCCTAGGCATGGTCCACCGCCAATTAGATCAGATCAGGGAGAACCTGAAGACTTATTGGACATATGCAAAGGAGCGGG
ATGAAGCTATTAGAGAGTTCTATCTCTCGATTGCCCCAAGTAGTGCCCCAGTCTTTCCTAAGACTTATTGGACATATGCAAAGGAGCGGGATGAAGCTATTAGAGAGTTC
TATCTCTCGATTGCCCCAAGTAGTGCCCCAGTCTTTTCTAAGACTTATTGGACATATGCAAAGGAGCGGGATGAAGCTATTAGAGAGTTCTATCTCTCGATTGCCCCGGT
CTTGTCAAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGAAGAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGTTTCTCCTCAGTCGACATCAACAGGGTGTACAGGATCAAGGCACCCTTGAACCCAAGGGGGAATGATGTGATCAGGAACCCTTCGGCCAAGCAAATGATGGA
AGCACTTAAAATTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCGCAAACAAAAGTGAAGTCTTTAGTGTCAAGCGACCTAAAGCCAGAATCGACAGTGTGGCTTAACT
TCATCAAGAACCGCTTGATGCCAACCACCCACGAAAGCACAATTTCAGTGGATAGAATTGTGCCAGGCAAGGACGAGGAGCGCCATTTTGTTAAACCAACCATTGACTTG
TCCTTGATAGGAAAGCTCCAGCAAAACAACATCCAGATGAAGGATGAAGCCTCCACATCACAAGCCACTCCTCAATCAGGGCCAAATATAGCTTCTTCATCCCAGCACAC
TCCTTTTACAGGGCCTTCACTAGCATCGAAAGCCCTAGGCATGGTCCACCGCCAATTAGATCAGATCAGGGAGAACCTGAAGACTTATTGGACATATGCAAAGGAGCGGG
ATGAAGCTATTAGAGAGTTCTATCTCTCGATTGCCCCAAGTAGTGCCCCAGTCTTTCCTAAGACTTATTGGACATATGCAAAGGAGCGGGATGAAGCTATTAGAGAGTTC
TATCTCTCGATTGCCCCAAGTAGTGCCCCAGTCTTTTCTAAGACTTATTGGACATATGCAAAGGAGCGGGATGAAGCTATTAGAGAGTTCTATCTCTCGATTGCCCCGGT
CTTGTCAAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGAAGAGAAATAG
Protein sequenceShow/hide protein sequence
MVSFSSVDINRVYRIKAPLNPRGNDVIRNPSAKQMMEALKIVANKGVQWKESQTKVKSLVSSDLKPESTVWLNFIKNRLMPTTHESTISVDRIVPGKDEERHFVKPTIDL
SLIGKLQQNNIQMKDEASTSQATPQSGPNIASSSQHTPFTGPSLASKALGMVHRQLDQIRENLKTYWTYAKERDEAIREFYLSIAPSSAPVFPKTYWTYAKERDEAIREF
YLSIAPSSAPVFSKTYWTYAKERDEAIREFYLSIAPVLSNFPQSLLPQEEEDSDEEEDEENEEK