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Lag0015931 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015931
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:29469674..29472833
RNA-Seq ExpressionLag0015931
SyntenyLag0015931
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030923408.1 uncharacterized protein LOC115950338 [Quercus lobata]2.3e-1238.94Show/hide
Query:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIR
        RFN E L V+  DD   L A  +G+  +  ++ + E +PQT  E +  Q +   + +   + K     RN+NKYC  H  HGH T EC  L+ +IE LIR
Subjt:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIR

Query:  EGYLKEFVGNGRS
        +G LK FVG  R+
Subjt:  EGYLKEFVGNGRS

XP_030923529.1 uncharacterized protein LOC115950474 [Quercus lobata]1.5e-1134.69Show/hide
Query:  GGQIRHEHSPADGRGRAKTQSQKGPRKFAGKDSVRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---
        GGQ RH+ S +     +    ++G  +       RFN E L V+  DD   L A  +G+  +  ++ + E +PQT  E +  Q +   + +   + K   
Subjt:  GGQIRHEHSPADGRGRAKTQSQKGPRKFAGKDSVRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---

Query:  EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS
          RN+NKYC  H  HGH T EC  L+ +IE LIR+G LK FVG  R+
Subjt:  EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS

XP_030924206.1 uncharacterized protein LOC115951026 [Quercus lobata]1.1e-1134.69Show/hide
Query:  GGQIRHEHSPADGRGRAKTQSQKGPRKFAGKDSVRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---
        GGQ RH+ S +     +    ++G  +       RFN E L V+  DD   L A  +G+  +  ++ + E +PQT  E +  Q +   + +   + K   
Subjt:  GGQIRHEHSPADGRGRAKTQSQKGPRKFAGKDSVRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---

Query:  EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS
          RN+NKYC  H  HGH T EC  L+ +IE LIR+G LK FVG  R+
Subjt:  EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS

XP_030948315.1 uncharacterized protein LOC115972240 [Quercus lobata]1.5e-1134.69Show/hide
Query:  GGQIRHEHSPADGRGRAKTQSQKGPRKFAGKDSVRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---
        GGQ RH+ S +     +    ++G  +       RFN E L V+  DD   L A  +G+  +  ++ + E +PQT  E +  Q +   + +   + K   
Subjt:  GGQIRHEHSPADGRGRAKTQSQKGPRKFAGKDSVRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---

Query:  EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS
          RN+NKYC  H  HGH T EC  L+ +IE LIR+G LK FVG  R+
Subjt:  EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS

XP_030969633.1 uncharacterized protein LOC115989899 [Quercus lobata]1.8e-1238.94Show/hide
Query:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIR
        RFN E L V+  DD   L A  +G+  +  ++++ E +PQT  E +  Q +   + +   + K     RN+NKYC  H  HGH T EC  L+ +IE LIR
Subjt:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK---EPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIR

Query:  EGYLKEFVGNGRS
        +G LK FVG  R+
Subjt:  EGYLKEFVGNGRS

TrEMBL top hitse value%identityAlignment
A0A2N9G0M8 Uncharacterized protein2.6e-0938.53Show/hide
Query:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAKEPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGY
        RFN E L V+G DD   + A ISGLQ    L S+ +  P T  E +                K P  R KYC  H  HGH T +C  L+ +IE LI++G 
Subjt:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAKEPRNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGY

Query:  LKEFVGNGR
        L+ FV  G+
Subjt:  LKEFVGNGR

A0A2N9GC82 Uncharacterized protein2.6e-0934.81Show/hide
Query:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK--------------------------EPRNRNKYCMS
        RFN E L V+G DD   L A ISGLQ    L S+ +  P T  E M  + Q   NG    +A+                          + R R+KYC  
Subjt:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAK--------------------------EPRNRNKYCMS

Query:  HGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGR
        H  HGH T +C  L+ +IE LI++G L+ FV  G+
Subjt:  HGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGR

A0A6J1DWY0 uncharacterized protein LOC1110252933.4e-0927.84Show/hide
Query:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANG--------------------------------RGRPEAKEP---
        RFN E LQVEG  D  +L+A +SG++DE L  S G+  P T+ E ++R ++  + G                                R R   K+P   
Subjt:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANG--------------------------------RGRPEAKEP---

Query:  ------------------------------------RNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFV
                                            R++ +YC+ H  HGH T++C  L++E+E LIR GYLKE+V
Subjt:  ------------------------------------RNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFV

A0A6J1DXB1 uncharacterized protein LOC1110254124.4e-0933.8Show/hide
Query:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYV---------------------------EFMTRQEQSSANG-RGRPEA----KEPRNR
        RF  E  +V  Y D  A+   ++GL DE L   +GE  P T+                            E +T  E+S       RPE      E RN+
Subjt:  RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYV---------------------------EFMTRQEQSSANG-RGRPEA----KEPRNR

Query:  NKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS
        +KYC  H  HGH T  C +L+ +IE LI++GY K+FVG  RS
Subjt:  NKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS

A0A7J0EIV6 Uncharacterized protein9.8e-0931.21Show/hide
Query:  KDSV-RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAKEP------------------------------
        KD V RFN  VL VE   D   +IA + GL+   L +S+ ++ P+T     ++ ++       RPE   P                              
Subjt:  KDSV-RFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAKEP------------------------------

Query:  -RNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFV
         RNRNKYC  H  HGH T +C QL+++I  LI+ GYL++++
Subjt:  -RNRNKYCMSHGGHGHTTRECIQLRDEIETLIREGYLKEFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTCAAGGTAATTTTGGACCACACAGATGCAAAAGGAGCTGACGAGGACAATCGGACAGAGGTAGGACCAAAAGACCGACCTAGAGGAAGACCGAACCAAAGGGT
CGGGCCAACATGGCTCGACCCATATGGTCAGCCTCGGCCTTTTACCGAGGCCGAGCATATAGTCGGCCTCGGCATAAGGTCAAGGCCGAGCCCGGTGACTTCTTTTCGGT
CCCTGATGCCCCGGATCGCCCCGGTTCCGCCTGGTTCGTCCCGAGACACCTCCGAATTCCTAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACC
ACACCCGTGTGCAGCGGTTTTTGCTTGTCTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCACTGTTGGTATCACGTGAAGGTCAGGATGGATCGGGTTCAGAAACC
AGAAAGAAACCTCGGGTATGAGCAGAAATCACTGACCCAAACTGGGGACAACCTCGGTATGGAAAAGGCCGACCCTAACTTCGGAGACTGTTGTAAGGTTTCGTGTGCCC
ACGATGCTGTGGACCTGACCCAAGAGGACAACCAGCAGAAGAAAAGAGAGAGCCGGGAAGTTTCTGTACCCGACCAACATCGAGAAGACAGAGGAAGAGGACGTCGGGTA
GAAGATGGAGGCCAGATCCGACATGAGCACTCCCCGGCCGATGGCCGAGGCCGAGCAAAAACCCAATCACAAAAAGGCCCGCGGAAGTTCGCCGGTAAAGACAGCGTCAG
ATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTCGCCTTGATTGCTGCGATTTCAGGTCTACAAGATGAAAGACTGCTCAACTCGATCGGTGAAAGCC
AGCCACAGACATACGTAGAATTCATGACCCGACAAGAGCAGTCCTCGGCCAATGGTCGAGGCCGACCAGAGGCGAAGGAGCCGAGGAACAGAAACAAATATTGCATGTCC
CACGGAGGTCACGGCCATACAACTCGAGAGTGCATCCAGTTACGAGACGAGATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTTGTGGGCAATGGCAGAAGCTA
G
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTCAAGGTAATTTTGGACCACACAGATGCAAAAGGAGCTGACGAGGACAATCGGACAGAGGTAGGACCAAAAGACCGACCTAGAGGAAGACCGAACCAAAGGGT
CGGGCCAACATGGCTCGACCCATATGGTCAGCCTCGGCCTTTTACCGAGGCCGAGCATATAGTCGGCCTCGGCATAAGGTCAAGGCCGAGCCCGGTGACTTCTTTTCGGT
CCCTGATGCCCCGGATCGCCCCGGTTCCGCCTGGTTCGTCCCGAGACACCTCCGAATTCCTAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACC
ACACCCGTGTGCAGCGGTTTTTGCTTGTCTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCACTGTTGGTATCACGTGAAGGTCAGGATGGATCGGGTTCAGAAACC
AGAAAGAAACCTCGGGTATGAGCAGAAATCACTGACCCAAACTGGGGACAACCTCGGTATGGAAAAGGCCGACCCTAACTTCGGAGACTGTTGTAAGGTTTCGTGTGCCC
ACGATGCTGTGGACCTGACCCAAGAGGACAACCAGCAGAAGAAAAGAGAGAGCCGGGAAGTTTCTGTACCCGACCAACATCGAGAAGACAGAGGAAGAGGACGTCGGGTA
GAAGATGGAGGCCAGATCCGACATGAGCACTCCCCGGCCGATGGCCGAGGCCGAGCAAAAACCCAATCACAAAAAGGCCCGCGGAAGTTCGCCGGTAAAGACAGCGTCAG
ATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTCGCCTTGATTGCTGCGATTTCAGGTCTACAAGATGAAAGACTGCTCAACTCGATCGGTGAAAGCC
AGCCACAGACATACGTAGAATTCATGACCCGACAAGAGCAGTCCTCGGCCAATGGTCGAGGCCGACCAGAGGCGAAGGAGCCGAGGAACAGAAACAAATATTGCATGTCC
CACGGAGGTCACGGCCATACAACTCGAGAGTGCATCCAGTTACGAGACGAGATAGAAACCCTAATCCGAGAGGGTTACCTCAAGGAGTTTGTGGGCAATGGCAGAAGCTA
G
Protein sequenceShow/hide protein sequence
MVLKVILDHTDAKGADEDNRTEVGPKDRPRGRPNQRVGPTWLDPYGQPRPFTEAEHIVGLGIRSRPSPVTSFRSLMPRIAPVPPGSSRDTSEFLKTLGGQTGIGGGVAYT
TPVCSGFCLSCRSRLPQLLQIHCWYHVKVRMDRVQKPERNLGYEQKSLTQTGDNLGMEKADPNFGDCCKVSCAHDAVDLTQEDNQQKKRESREVSVPDQHREDRGRGRRV
EDGGQIRHEHSPADGRGRAKTQSQKGPRKFAGKDSVRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESQPQTYVEFMTRQEQSSANGRGRPEAKEPRNRNKYCMS
HGGHGHTTRECIQLRDEIETLIREGYLKEFVGNGRS