| GenBank top hits | e value | %identity | Alignment |
|---|
| AAD21778.1 putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] | 1.3e-73 | 35.96 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRGRR--------------------------------------YGWVMECVTFVSYILVI
+L RL++ L ++S++Q AFV G+ ISDN+L+AHE+LHS++ RR W+M CVT VSY ++I
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRGRR--------------------------------------YGWVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N PYG I RGIRQGDPLS YLF+ C++VL ML ++ +++ G KI K I+ + FADDSL FCRA+N+ +L I +Y E SGQ +++ K
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S+++F P RR ++ +LGI+ KYLG+ + G K F+ I +V+ + +GWA +LS G+E+++KA+A+ALP+Y+MNCF +P +C +I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWWQKKKRGE-----------------------TVQSAL--------FKQTCFLEVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWH
N+ I FWW K+ G+ QS L + T +L G AS+GW SI G+ +L++G R R+G IW
Subjt: NNKIAQFWWQKKKRGE-----------------------TVQSAL--------FKQTCFLEVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWH
Query: DPWLPRPHTFRPLR--CINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSI
DPWLP RP R ++ D ++A D EN R W+ L +D +LA S+
Subjt: DPWLPRPHTFRPLR--CINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSI
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| CAB4273082.1 unnamed protein product [Prunus armeniaca] | 8.1e-76 | 33.4 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
+L +RL++VLP +VS NQ+AFV+ R I+DNILI HE+LHS++ R+ G W+ EC++ V+Y +++
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N + I+ RG+RQGDPLS +LF++C++ L +L + L G+K+ I+ +FFADDS+IFC E + L +I+ Y + SGQ ++FDK
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S++ F P + Q+ +LG+ QS KYLG++ +FG SKR F+ ++ R+ K+ GWAEQ+LS+ G+EVL+KAVA+A+P Y+M+CFK+PVS+CK+I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWW--QKKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
IA FWW QK +RG +Q + + F+ + SWGW I+ GR +L
Subjt: NNKIAQFWW--QKKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
Query: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
+ G RWR+G V I D WL P H PL + + +D+N+R W+ + C ++ K +IPI
Subjt: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
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| CAB4274760.1 unnamed protein product [Prunus armeniaca] | 1.8e-75 | 33.97 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSM-RGRR-------------------------------------YGWVMECVTFVSYILVI
+L RL+ VLP L+S +Q+AFV R I+DNIL+ HE+LHS+ RG+R W+ EC++ VSY ++I
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSM-RGRR-------------------------------------YGWVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N P G I RG+RQGDPLS +LF++C++ L +++ ++Q L G+++ + I+ + FADDS++FC+A E +L I+ Y SGQ+V+FDK
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S++ +S RVQ+ +L + KYLG+ +FG SKR F+ ++ +++ K+ GWAEQ+LS G+EVL+KAVA+A+P YTM+CFK+PV++CK+I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWW------------------QKKKRGE-------------------------------TVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
+A+FWW Q KK G + F FL + +SWGW I+ GR +L
Subjt: NNKIAQFWW------------------QKKKRGE-------------------------------TVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
Query: KKGFRWRVGAESQVDIWHDPWLPRPHTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
+ G RWR+G + V + +DPWLP P+TFR L + + +D ++ W + C ++ LSIPI
Subjt: KKGFRWRVGAESQVDIWHDPWLPRPHTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
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| CAB4303756.1 unnamed protein product [Prunus armeniaca] | 1.7e-73 | 33.76 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMR-GRR-------------------------------------YGWVMECVTFVSYILVI
+L RL+ VLP L+S Q+AFV R I+DNIL+ HE+LHS++ G+R W+ EC++ VSY ++I
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMR-GRR-------------------------------------YGWVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N P G I RG+RQGDPLS +LF++C+K L +++ ++Q L G+++ + I+ + FADDS++FC+A E +L I+ Y SGQ+V+FDK
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S++ +S RVQ+ +L + KYLG+ +FG SKR F+ + +++ K+ GWAEQ+LS G+EVL+KAVA+A+P YTM+ FK+PV++CK+I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWW------------------QKKKRGE-------------------------------TVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
+A+FWW Q KK G + F FL + +SWGW I+ GR +L
Subjt: NNKIAQFWW------------------QKKKRGE-------------------------------TVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
Query: KKGFRWRVGAESQVDIWHDPWLPRPHTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
+ G RWR+G + V + +DPWLP P+TFR L + + +D ++ W + C ++ LSIPI
Subjt: KKGFRWRVGAESQVDIWHDPWLPRPHTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
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| CAB4310240.1 unnamed protein product [Prunus armeniaca] | 2.0e-74 | 32.99 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
+L +RL +VLP +VS NQ+AFV+ R I+DNILI HE+LHS++ R+ G W++EC++ V+Y +++
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N + ++ RG+RQGDPLS +LF++C++ L +L + L G+K+ I+ +FFADDS I C E + L +I+ Y + S Q ++FDK
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S++ F P + Q+ +LG+ S KYLG++ +FG+SKR F+ ++ R+ K+ GWAEQ+LS+ G+EVL+KAVA+A+P Y+M+CFK+PVS+CK+I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWWQ--KKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
IA FWW+ K +RG +Q + Q+ F+ V + SWGW I+ GR +L
Subjt: NNKIAQFWWQ--KKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
Query: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
+ G RWR+G V I D WLP P H PL + + +D+N+R W+ + C ++ K +IPI
Subjt: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9H680 Reverse transcriptase domain-containing protein | 4.8e-74 | 36.36 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMR----GRRY-------------------------------GWV---MECVTFVSYILVI
VL R++ +LPK++S++Q AFV GR ISDN+++A EVLH ++ G Y WV M CVT SY +++
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMR----GRRY-------------------------------GWV---MECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N P+G I RG+RQGDPLS YLF+LC++ L ++ ++ ++K+ G I + P ++ +FFADDS+IFCRA+ + + I+ Y SGQ ++ +K
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
+ FS +TP R ++ + + ST+ +KYLG+ G SK+ F+ IK R+ +++GW E+ LS GRE+L+K V A+P Y M+CFK +C DI
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWWQKKKRGETVQSA-LFKQTCFLEVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWLPRPHTFR---PLRCINGDWRLARDFM
+ +FWW ++ + A F T FLE ++ G S+ W SI R VL G RWRVG + + IW D WLP P TFR P+ N + +
Subjt: NNKIAQFWWQKKKRGETVQSA-LFKQTCFLEVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWLPRPHTFR---PLRCINGDWRLARDFM
Query: DENVRAWNTQRLRHCLEEDDVKLALSIPI
DEN R W+ L+ DV++ IP+
Subjt: DENVRAWNTQRLRHCLEEDDVKLALSIPI
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| A0A6J5UAY2 Reverse transcriptase domain-containing protein | 3.9e-76 | 33.4 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
+L +RL++VLP +VS NQ+AFV+ R I+DNILI HE+LHS++ R+ G W+ EC++ V+Y +++
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N + I+ RG+RQGDPLS +LF++C++ L +L + L G+K+ I+ +FFADDS+IFC E + L +I+ Y + SGQ ++FDK
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S++ F P + Q+ +LG+ QS KYLG++ +FG SKR F+ ++ R+ K+ GWAEQ+LS+ G+EVL+KAVA+A+P Y+M+CFK+PVS+CK+I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWW--QKKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
IA FWW QK +RG +Q + + F+ + SWGW I+ GR +L
Subjt: NNKIAQFWW--QKKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
Query: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
+ G RWR+G V I D WL P H PL + + +D+N+R W+ + C ++ K +IPI
Subjt: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
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| A0A6J5UE59 Reverse transcriptase domain-containing protein | 8.8e-76 | 33.97 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSM-RGRR-------------------------------------YGWVMECVTFVSYILVI
+L RL+ VLP L+S +Q+AFV R I+DNIL+ HE+LHS+ RG+R W+ EC++ VSY ++I
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSM-RGRR-------------------------------------YGWVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N P G I RG+RQGDPLS +LF++C++ L +++ ++Q L G+++ + I+ + FADDS++FC+A E +L I+ Y SGQ+V+FDK
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S++ +S RVQ+ +L + KYLG+ +FG SKR F+ ++ +++ K+ GWAEQ+LS G+EVL+KAVA+A+P YTM+CFK+PV++CK+I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWW------------------QKKKRGE-------------------------------TVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
+A+FWW Q KK G + F FL + +SWGW I+ GR +L
Subjt: NNKIAQFWW------------------QKKKRGE-------------------------------TVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
Query: KKGFRWRVGAESQVDIWHDPWLPRPHTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
+ G RWR+G + V + +DPWLP P+TFR L + + +D ++ W + C ++ LSIPI
Subjt: KKGFRWRVGAESQVDIWHDPWLPRPHTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
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| A0A6J5X8F1 Reverse transcriptase domain-containing protein | 9.7e-75 | 32.99 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
+L +RL +VLP +VS NQ+AFV+ R I+DNILI HE+LHS++ R+ G W++EC++ V+Y +++
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRG-------------------------------RRYG-------WVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N + ++ RG+RQGDPLS +LF++C++ L +L + L G+K+ I+ +FFADDS I C E + L +I+ Y + S Q ++FDK
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S++ F P + Q+ +LG+ S KYLG++ +FG+SKR F+ ++ R+ K+ GWAEQ+LS+ G+EVL+KAVA+A+P Y+M+CFK+PVS+CK+I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWWQ--KKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
IA FWW+ K +RG +Q + Q+ F+ V + SWGW I+ GR +L
Subjt: NNKIAQFWWQ--KKKRG-----------------------------------------------ETVQSALFKQTCFLEVEIKGRASWGWGSIMAGRCVL
Query: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
+ G RWR+G V I D WLP P H PL + + +D+N+R W+ + C ++ K +IPI
Subjt: KKGFRWRVGAESQVDIWHDPWLPRP--------HTFRPLRCINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSIPI
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| Q9SIS9 Putative non-LTR retroelement reverse transcriptase | 6.3e-74 | 35.96 | Show/hide |
Query: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRGRR--------------------------------------YGWVMECVTFVSYILVI
+L RL++ L ++S++Q AFV G+ ISDN+L+AHE+LHS++ RR W+M CVT VSY ++I
Subjt: VLPIRLRRVLPKLVSENQTAFVQGRAISDNILIAHEVLHSMRGRR--------------------------------------YGWVMECVTFVSYILVI
Query: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
N PYG I RGIRQGDPLS YLF+ C++VL ML ++ +++ G KI K I+ + FADDSL FCRA+N+ +L I +Y E SGQ +++ K
Subjt: NDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHELLRIMTEYGEFSGQAVSFDK
Query: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
S+++F P RR ++ +LGI+ KYLG+ + G K F+ I +V+ + +GWA +LS G+E+++KA+A+ALP+Y+MNCF +P +C +I
Subjt: SNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSKRATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVALALPIYTMNCFKMPVSVCKDI
Query: NNKIAQFWWQKKKRGE-----------------------TVQSAL--------FKQTCFLEVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWH
N+ I FWW K+ G+ QS L + T +L G AS+GW SI G+ +L++G R R+G IW
Subjt: NNKIAQFWWQKKKRGE-----------------------TVQSAL--------FKQTCFLEVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWH
Query: DPWLPRPHTFRPLR--CINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSI
DPWLP RP R ++ D ++A D EN R W+ L +D +LA S+
Subjt: DPWLPRPHTFRPLR--CINGDWRLARDFMDENVRAWNTQRLRHCLEEDDVKLALSI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P08548 LINE-1 reverse transcriptase homolog | 2.3e-12 | 27.12 | Show/hide |
Query: TFVSYILVINDKPYGMINLG----------RGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHEL
TF+ I I KP I L G RQG PLS LF + +VL + E ++ + G I I FADD +++ T + +L
Subjt: TFVSYILVINDKPYGMINLG----------RGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDSLIFCRATNEECHEL
Query: LRIMTEYGEFSGQAVSFDKSNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSK--RATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVA
L ++ EY SG ++ KS V F + + V + K KYLGV + + + ++ ++ + + W S +GR ++K
Subjt: LRIMTEYGEFSGQAVSFDKSNVVFSISTPVERRVQVVVVLGINQSTKMDKYLGVDIEFGLSK--RATFDNIKHRVEMKIKGWAEQWLSNVGREVLLKAVA
Query: LALPIYTMNC--FKMPVSVCKDINNKIAQFWWQKKK
L IY N K P+S KD+ I F W +KK
Subjt: LALPIYTMNC--FKMPVSVCKDINNKIAQFWWQKKK
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| P92555 Uncharacterized mitochondrial protein AtMg01250 | 6.2e-10 | 40.85 | Show/hide |
Query: ILVINDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDS
+ +IN P G++ RG+RQGDPLS YLF+LC++VL + + Q +L G +++ ++ P I + FADD+
Subjt: ILVINDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDS
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| P93295 Uncharacterized mitochondrial protein AtMg00310 | 1.2e-05 | 20.26 | Show/hide |
Query: LALPIYTMNCFKMPVSVCKDINNKIAQFWW---QKKKR-----------------------------------------------GETVQSALFKQTCFL
+ALP+Y M+CF++ +CK + + + +FWW + K++ ++S F + +
Subjt: LALPIYTMNCFKMPVSVCKDINNKIAQFWW---QKKKR-----------------------------------------------GETVQSALFKQTCFL
Query: EVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWLPRPHTFRPL
E + R S+ W SI+ GR +L +G +G +W D W+ PL
Subjt: EVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWLPRPHTFRPL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 1.8e-04 | 28.77 | Show/hide |
Query: LPKLVSENQTAFVQGRAISDNILIAHEVLHSMRGRRYGWVMECVTFVSYI------LVINDKPYGMINLGRGI
+P +V NQ F++GR + +N+L+A E++ + G+R W + T S+I L +P+ + ++G G+
Subjt: LPKLVSENQTAFVQGRAISDNILIAHEVLHSMRGRRYGWVMECVTFVSYI------LVINDKPYGMINLGRGI
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| AT4G29090.1 Ribonuclease H-like superfamily protein | 3.7e-10 | 25.25 | Show/hide |
Query: LALPIYTMNCFKMPVSVCKDINNKIAQFWWQKKK--------------------------------------------RGETVQSALFKQTCF-----LE
+ALP YTM CF +P +VCK I + +A FWW+ K+ R E++ + +FK F L
Subjt: LALPIYTMNCFKMPVSVCKDINNKIAQFWWQKKK--------------------------------------------RGETVQSALFKQTCF-----LE
Query: VEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWL---PRPHTFRPLRCINGDWR------LARDFMDENVRAWNTQRLRHCLEEDDVKL
+ R S+ W SI A + +L++G R VG + IW WL P R R ++ D +DE+ R W + E + KL
Subjt: VEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWL---PRPHTFRPLRCINGDWR------LARDFMDENVRAWNTQRLRHCLEEDDVKL
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| ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 8.5e-07 | 20.26 | Show/hide |
Query: LALPIYTMNCFKMPVSVCKDINNKIAQFWW---QKKKR-----------------------------------------------GETVQSALFKQTCFL
+ALP+Y M+CF++ +CK + + + +FWW + K++ ++S F + +
Subjt: LALPIYTMNCFKMPVSVCKDINNKIAQFWW---QKKKR-----------------------------------------------GETVQSALFKQTCFL
Query: EVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWLPRPHTFRPL
E + R S+ W SI+ GR +L +G +G +W D W+ PL
Subjt: EVEIKGRASWGWGSIMAGRCVLKKGFRWRVGAESQVDIWHDPWLPRPHTFRPL
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| ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) | 4.4e-11 | 40.85 | Show/hide |
Query: ILVINDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDS
+ +IN P G++ RG+RQGDPLS YLF+LC++VL + + Q +L G +++ ++ P I + FADD+
Subjt: ILVINDKPYGMINLGRGIRQGDPLSSYLFVLCSKVLLFMLEESHSQQKLSGYKIAKHAPPPIATIFFADDS
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