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Lag0015955 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015955
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr12:30082359..30083015
RNA-Seq ExpressionLag0015955
SyntenyLag0015955
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035273.1 transposase [Cucumis melo var. makuwa]6.5e-2345.98Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVASE
        M + VEQ   +LFH YS++ SGS    S   +  T+   G       D +E  G    + T+        TT F++  SEID+YL E  +  +   VAS+
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVASE

Query:  SAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL
        SAFS  GRVVDSSR SLAPKTVEALICTQNWLNS+ I ++F   LEE S  EEGFR+V++ EK+++++ DF  L
Subjt:  SAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL

KAA0048472.1 transposase [Cucumis melo var. makuwa]8.5e-2340.98Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFD-RESEIDVYLSETIAKDD------
        M + VEQ   +LFH YS++ SGS   G  + S  + +   +   ++D D +E  G    + T+        TT F+ R SEID+YL E   + +      
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFD-RESEIDVYLSETIAKDD------

Query:  -------------------------KIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-
                                   VASESAFS GGRV+DSSR SLAPKTVEALICTQNWLNSNPI ++F   LEE S  EEGFR+V++ EK+++++ 
Subjt:  -------------------------KIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-

Query:  DFSNL
        DF  L
Subjt:  DFSNL

KAA0051985.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.5e-2346.15Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS
        M + VEQ   +LFH YS++ SGS   G  ++S  + +   +   ++D D +E  G    + T+        TT F++  SEID+YL E  +  +   VAS
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS

Query:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI
        ESAFS  GRVVDSSR SLAPKTVEALICTQNWLNS+PI ++    LEE S  EEGFR+V++ EK++ ++
Subjt:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI

KAA0056156.1 transposase [Cucumis melo var. makuwa]1.1e-2245.66Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSETIAKDDKIVASES
        M + VEQ   +LFH Y ++ SGS    S   +  T+   G       D +E  G    + T+        TT F++  SEI +YL E   + +   ASES
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSETIAKDDKIVASES

Query:  AFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL
        AFS GGRVVDSSR SLAPKTVEALICTQNWLNS+PI ++F   LEE S  EE FR+V++ EK+++++ DF  L
Subjt:  AFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL

TYK04573.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.5e-2346.15Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS
        M + VEQ   +LFH YS++ SGS   G  ++S  + +   +   ++D D +E  G    + T+        TT F++  SEID+YL E  +  +   VAS
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS

Query:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI
        ESAFS  GRVVDSSR SLAPKTVEALICTQNWLNS+PI ++    LEE S  EEGFR+V++ EK++ ++
Subjt:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI

TrEMBL top hitse value%identityAlignment
A0A5A7SXI9 Transposase3.1e-2345.98Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVASE
        M + VEQ   +LFH YS++ SGS    S   +  T+   G       D +E  G    + T+        TT F++  SEID+YL E  +  +   VAS+
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVASE

Query:  SAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL
        SAFS  GRVVDSSR SLAPKTVEALICTQNWLNS+ I ++F   LEE S  EEGFR+V++ EK+++++ DF  L
Subjt:  SAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL

A0A5A7UE50 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.1e-2346.15Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS
        M + VEQ   +LFH YS++ SGS   G  ++S  + +   +   ++D D +E  G    + T+        TT F++  SEID+YL E  +  +   VAS
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS

Query:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI
        ESAFS  GRVVDSSR SLAPKTVEALICTQNWLNS+PI ++    LEE S  EEGFR+V++ EK++ ++
Subjt:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI

A0A5A7UPB8 Transposase5.4e-2345.66Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSETIAKDDKIVASES
        M + VEQ   +LFH Y ++ SGS    S   +  T+   G       D +E  G    + T+        TT F++  SEI +YL E   + +   ASES
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSETIAKDDKIVASES

Query:  AFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL
        AFS GGRVVDSSR SLAPKTVEALICTQNWLNS+PI ++F   LEE S  EE FR+V++ EK+++++ DF  L
Subjt:  AFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-DFSNL

A0A5D3BXV2 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.1e-2346.15Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS
        M + VEQ   +LFH YS++ SGS   G  ++S  + +   +   ++D D +E  G    + T+        TT F++  SEID+YL E  +  +   VAS
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFDR-ESEIDVYLSE-TIAKDDKIVAS

Query:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI
        ESAFS  GRVVDSSR SLAPKTVEALICTQNWLNS+PI ++    LEE S  EEGFR+V++ EK++ ++
Subjt:  ESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI

A0A5D3DXX1 Transposase4.1e-2340.98Show/hide
Query:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFD-RESEIDVYLSETIAKDD------
        M + VEQ   +LFH YS++ SGS   G  + S  + +   +   ++D D +E  G    + T+        TT F+ R SEID+YL E   + +      
Subjt:  MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVD-DGSETYGFAHSFSTV-------KTTTFD-RESEIDVYLSETIAKDD------

Query:  -------------------------KIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-
                                   VASESAFS GGRV+DSSR SLAPKTVEALICTQNWLNSNPI ++F   LEE S  EEGFR+V++ EK+++++ 
Subjt:  -------------------------KIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEI-

Query:  DFSNL
        DF  L
Subjt:  DFSNL

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase4.9e-0555.56Show/hide
Query:  ETIAKDDKIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWL
        + +A     VASESAFS GGRVVD  R+ L  + VEALICT++W+
Subjt:  ETIAKDDKIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWL

P08770 Putative AC transposase3.7e-0538.2Show/hide
Query:  ETIAKDDKIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEED-STLEEGFRMVIDEEKDVDE----IDFS
        + +A     VASESAFS GGRVVD  R+ L  + VEALICT++W+ ++     +F  +  D   L+       + E  +DE    I+FS
Subjt:  ETIAKDDKIVASESAFSIGGRVVDSSRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEED-STLEEGFRMVIDEEKDVDE----IDFS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATAAGGTAGAGCAGGTTTTGATACAACTCTTCCATGCATATAGTTCATCTTCTTCTGGTAGTGGTGGTAGTGGCAGTGGCAATTTAAGTGTCATTACTAAAGA
AAAGGGTGGGGCTCAAACAATGGATGTTGATGATGGGAGTGAGACATATGGATTTGCACATTCATTTTCAACTGTTAAGACTACTACCTTCGATAGAGAGTCAGAAATTG
ATGTGTATTTATCAGAAACTATTGCTAAGGATGATAAGATAGTAGCATCTGAGTCTGCTTTTAGCATTGGAGGACGGGTGGTTGATTCCTCTCGTTCTTCATTAGCTCCA
AAAACAGTTGAGGCTCTTATATGCACTCAAAATTGGCTCAATTCCAACCCAATAGATATTGAGTTTTTCAAACTACTAGAGGAAGATTCAACACTGGAAGAAGGATTCAG
GATGGTCATTGATGAAGAAAAGGATGTTGATGAGATTGACTTTTCTAACTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATAAGGTAGAGCAGGTTTTGATACAACTCTTCCATGCATATAGTTCATCTTCTTCTGGTAGTGGTGGTAGTGGCAGTGGCAATTTAAGTGTCATTACTAAAGA
AAAGGGTGGGGCTCAAACAATGGATGTTGATGATGGGAGTGAGACATATGGATTTGCACATTCATTTTCAACTGTTAAGACTACTACCTTCGATAGAGAGTCAGAAATTG
ATGTGTATTTATCAGAAACTATTGCTAAGGATGATAAGATAGTAGCATCTGAGTCTGCTTTTAGCATTGGAGGACGGGTGGTTGATTCCTCTCGTTCTTCATTAGCTCCA
AAAACAGTTGAGGCTCTTATATGCACTCAAAATTGGCTCAATTCCAACCCAATAGATATTGAGTTTTTCAAACTACTAGAGGAAGATTCAACACTGGAAGAAGGATTCAG
GATGGTCATTGATGAAGAAAAGGATGTTGATGAGATTGACTTTTCTAACTTGTGA
Protein sequenceShow/hide protein sequence
MTDKVEQVLIQLFHAYSSSSSGSGGSGSGNLSVITKEKGGAQTMDVDDGSETYGFAHSFSTVKTTTFDRESEIDVYLSETIAKDDKIVASESAFSIGGRVVDSSRSSLAP
KTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEGFRMVIDEEKDVDEIDFSNL