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Lag0015958 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015958
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUbiquitin family protein
Genome locationchr12:30108676..30108995
RNA-Seq ExpressionLag0015958
SyntenyLag0015958
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584069.1 Polyubiquitin 10, partial [Cucurbita argyrosperma subsp. sororia]9.3e-0443.66Show/hide
Query:  NDGRRFVVDKLTKKLPIFFDETLWLE-----TIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        N+G++ V+ K+   +     +T+ LE     TI  +KAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  NDGRRFVVDKLTKKLPIFFDETLWLE-----TIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

KFY87693.1 hypothetical protein V500_06818 [Pseudogymnoascus sp. VKM F-4518 (FW-2643)]5.5e-0440.3Show/hide
Query:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY
        Q G +G+ FV+    K + + FD T   +T+  LK++++ K G  P   ++IFAG+QLED R L+DY
Subjt:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY

KFZ09362.1 hypothetical protein V502_08808 [Pseudogymnoascus sp. VKM F-4520 (FW-2644)]5.5e-0440.3Show/hide
Query:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY
        Q G +G+ FV+    K + + FD T   +T+  LK++++ K G  P   ++IFAG+QLED R L+DY
Subjt:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY

XP_024191133.1 ubiquitin-40S ribosomal protein S27a isoform X2 [Rosa chinensis]7.1e-0444.78Show/hide
Query:  GNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        G +G +  V  LT+K      E+   +TI  +KAK+Q K G +P   +LIFAG+QLED R LA+Y I
Subjt:  GNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

TrEMBL top hitse value%identityAlignment
A0A094FG39 Ubiquitin-like domain-containing protein2.6e-0440.3Show/hide
Query:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY
        Q G +G+ FV+    K + + FD T   +T+  LK++++ K G  P   ++IFAG+QLED R L+DY
Subjt:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY

A0A094H329 Ubiquitin-like domain-containing protein2.6e-0440.3Show/hide
Query:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY
        Q G +G+ FV+    K + + FD T   +T+  LK++++ K G  P   ++IFAG+QLED R L+DY
Subjt:  QYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADY

A0A0J6YLQ4 Ubiquitin5.9e-0445.16Show/hide
Query:  RFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +FVV +   K+ IF       +TI  +K K+Q K G  P   +LIFAG+QLED R L+DY I
Subjt:  RFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

A0A4R8BBK7 Ubiquitin domain-containing protein5.9e-0460.98Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +K+K+Q K GY P  I+LIFAG+QLED+RIL DY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

A0A7N4NX21 40S ribosomal protein S27a3.5e-0444Show/hide
Query:  GNDGRRFVVDKLTKK--LPIFFDETLWL------ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        G +GRRF++  L K+  L  +F     L      +TI  +KAK+Q K G  P   +LIFAG+QLED R L+DY I
Subjt:  GNDGRRFVVDKLTKK--LPIFFDETLWL------ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

SwissProt top hitse value%identityAlignment
P0CH10 Ubiquitin-60S ribosomal protein L403.0e-0558.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

P0CH11 Ubiquitin-60S ribosomal protein L403.0e-0558.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

P0CH27 Ubiquitin-60S ribosomal protein L403.0e-0558.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

Q39256 Polyubiquitin 81.4e-0558.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G +P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

Q3E7K8 Polyubiquitin 121.8e-0560.98Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  LKAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein2.8e-0658.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

AT1G31340.1 related to ubiquitin 12.8e-0658.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

AT1G55060.1 ubiquitin 121.3e-0660.98Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  LKAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

AT1G65350.1 ubiquitin 132.8e-0658.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G  P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI

AT3G09790.1 ubiquitin 89.6e-0758.54Show/hide
Query:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI
        +TI  +KAK+Q K G +P   +LIFAG+QLED R LADY I
Subjt:  ETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATATGGGAACGATGGACGGCGTTTTGTTGTTGACAAGTTGACAAAAAAACTTCCCATATTCTTTGATGAAACTCTCTGGTTAGAAACAATCGCGTATCTGAAGGC
TAAACTCCAAACAAAGGGAGGATATATTCCATCTAACATTCAGTTGATTTTTGCTGGAAGGCAACTCGAAGATAGCAGAATTCTAGCAGACTATTGCATCTCCGCTCCTG
TTGGGGATGTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATATGGGAACGATGGACGGCGTTTTGTTGTTGACAAGTTGACAAAAAAACTTCCCATATTCTTTGATGAAACTCTCTGGTTAGAAACAATCGCGTATCTGAAGGC
TAAACTCCAAACAAAGGGAGGATATATTCCATCTAACATTCAGTTGATTTTTGCTGGAAGGCAACTCGAAGATAGCAGAATTCTAGCAGACTATTGCATCTCCGCTCCTG
TTGGGGATGTTGTTTAG
Protein sequenceShow/hide protein sequence
MQYGNDGRRFVVDKLTKKLPIFFDETLWLETIAYLKAKLQTKGGYIPSNIQLIFAGRQLEDSRILADYCISAPVGDVV