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Lag0015981 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015981
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDynactin subunit 3
Genome locationchr12:30689395..30692716
RNA-Seq ExpressionLag0015981
SyntenyLag0015981
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651760.1 hypothetical protein Csa_006466 [Cucumis sativus]1.1e-1059.42Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAKVTGMKAAIKKMDMQATKELLAEIKLL
        NSPNLPLSF ARLAKKA+VR IF+LA+EE SLHNIEDLIDTA+  GM  A   +    +K+++ +I ++
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAKVTGMKAAIKKMDMQATKELLAEIKLL

KAG6574831.1 putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1172.41Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAKVTGMKAAIKKMDMQA
        NSPNLPLSF ARLAKKA+VRGIFLLA+EE SLHNIEDLIDTA+  G  A ++K    A
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAKVTGMKAAIKKMDMQA

KAG7013408.1 putative acyl-activating enzyme 19, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-1088.37Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSPNLPLSF ARLAKKA+VRGIFLLA+EE SLHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

XP_022958896.1 uncharacterized protein LOC111460046 [Cucurbita moschata]2.5e-1088.37Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSPNLPLSF ARLAKKA+VRGIFLLA+EE SLHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

XP_038874375.1 uncharacterized protein LOC120067065 [Benincasa hispida]2.5e-1088.37Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSPNLPLSF ARLAKKA+VRGIFLLA+EE SLHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

TrEMBL top hitse value%identityAlignment
A0A0A0LL01 Uncharacterized protein1.0e-0983.72Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSPNLPLSF ARLAKKA+VR IF+LA+EE SLHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

A0A5A7TEG5 Uncharacterized protein1.0e-0983.72Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSPNLPLSF ARLAKKA+VR IF+LA+EE SLHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

A0A6J1DN67 uncharacterized protein LOC1110227721.0e-0986.05Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSP LPLSF ARLAKKA+VRGIFLLA+EE SLHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

A0A6J1H3E8 uncharacterized protein LOC1114600461.2e-1088.37Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSPNLPLSF ARLAKKA+VRGIFLLA+EE SLHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

A0A6J1L292 uncharacterized protein LOC1114991852.7e-1086.05Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSPNLPLSF ARLAKKA+VRGIFLLA+EE +LHNIEDLIDTA+
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65032.1 unknown protein3.7e-0760.47Show/hide
Query:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK
        NSP L LS+ +RLAKKA+VR IFL  +EE S HN+ DLI T +
Subjt:  NSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTCCACGCCAGGTCGTTCGCGTCTCCCTCCTTCATTGTCGATGTTGTTTATGCGCGAGTGATTTCTTCATGGCCATCGCTAGCTCTTTTCGATTCCTTCACCAT
CGCGGAGTATTTGAGGGAACTAGACAATCCCACCAAGTATATTGCGGTGCCCAACTCCCCAAATTTGCCTCTCAGCTTCCCTGCTAGATTAGCAAAGAAGGCAAAGGTTC
GTGGCATTTTCTTGCTTGCTACTGAAGAGCCATCCCTTCACAATATTGAAGATCTCATTGATACTGCTAAAGTTACTGGAATGAAAGCAGCAATAAAGAAGATGGATATG
CAAGCTACAAAGGAGCTCCTTGCAGAAATTAAGCTGCTTGTGCAAGCTAAGTTGTCTACATCGAAGTACATTGGTGGTTTTTCTTCCAATGTTGTGCCAAATGCTAAAAT
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTCCACGCCAGGTCGTTCGCGTCTCCCTCCTTCATTGTCGATGTTGTTTATGCGCGAGTGATTTCTTCATGGCCATCGCTAGCTCTTTTCGATTCCTTCACCAT
CGCGGAGTATTTGAGGGAACTAGACAATCCCACCAAGTATATTGCGGTGCCCAACTCCCCAAATTTGCCTCTCAGCTTCCCTGCTAGATTAGCAAAGAAGGCAAAGGTTC
GTGGCATTTTCTTGCTTGCTACTGAAGAGCCATCCCTTCACAATATTGAAGATCTCATTGATACTGCTAAAGTTACTGGAATGAAAGCAGCAATAAAGAAGATGGATATG
CAAGCTACAAAGGAGCTCCTTGCAGAAATTAAGCTGCTTGTGCAAGCTAAGTTGTCTACATCGAAGTACATTGGTGGTTTTTCTTCCAATGTTGTGCCAAATGCTAAAAT
TTGA
Protein sequenceShow/hide protein sequence
MSLHARSFASPSFIVDVVYARVISSWPSLALFDSFTIAEYLRELDNPTKYIAVPNSPNLPLSFPARLAKKAKVRGIFLLATEEPSLHNIEDLIDTAKVTGMKAAIKKMDM
QATKELLAEIKLLVQAKLSTSKYIGGFSSNVVPNAKI